Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0233
         (677 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U61947-7|AAB03137.1|  735|Caenorhabditis elegans Hypothetical pr...   115   3e-26
Z49886-2|CAA90051.1|  268|Caenorhabditis elegans Hypothetical pr...    33   0.14 
Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical p...    28   5.3  
Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical pr...    28   5.3  
U28735-1|AAG38886.2|  272|Caenorhabditis elegans Hypothetical pr...    28   5.3  
AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical...    28   7.0  
AF039052-10|AAF98634.1|  536|Caenorhabditis elegans Hypothetical...    28   7.0  
Z77659-6|CAB01167.1|  401|Caenorhabditis elegans Hypothetical pr...    27   9.3  

>U61947-7|AAB03137.1|  735|Caenorhabditis elegans Hypothetical
           protein C06G3.9 protein.
          Length = 735

 Score =  115 bits (277), Expect = 3e-26
 Identities = 60/158 (37%), Positives = 93/158 (58%), Gaps = 1/158 (0%)
 Frame = +3

Query: 165 TDWDEIKRLAADFQKAQLSTTAQRLSERNCIEIVTKLIELKLIDVIFTNDGKEYLTSLQL 344
           T W +I++LA+D Q+ QLS ++++LSE NCIE++ KLI    IDV++T DG  Y+T   L
Sbjct: 2   TSWADIQKLASDLQRVQLSQSSKKLSEVNCIEVLQKLIASHRIDVVYTRDGHSYVTKNHL 61

Query: 345 IKEMKDELYVHGGRINTVDLAKELNVDFNHITTHIPEIVKGKDVQLIS-GYLITNYYLEK 521
             E+K+E    GGR +  D+A  LN+DF+HI      IV   D   IS   +    Y+ +
Sbjct: 62  ETEIKNECIAAGGRASLTDIAVALNIDFDHIEKTSRLIVSTDDEFTISNAEIFATEYVHR 121

Query: 522 IAREVNEKLQLQGYISVGELTLHYDLPADLIQHSVLEK 635
           +  E+   L  QG  +   L  H++L ++L+Q  ++EK
Sbjct: 122 LRNELRTLLDEQGNQTTAALCKHWNLSSELLQSLLIEK 159


>Z49886-2|CAA90051.1|  268|Caenorhabditis elegans Hypothetical
           protein C06A1.2 protein.
          Length = 268

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = -2

Query: 463 FTISGMCVVMWLKSTFNSLAKSTVFIRPPCTYNSSFISFISWSEVRYSLPSFV 305
           F+   MCVV+WL+    +L+K+ +F   PC+ +S    F   S   Y +P  +
Sbjct: 116 FSQISMCVVVWLEEEMGNLSKNMLFFFLPCSPSSILCLFRCAS--HYDIPIII 166


>Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical
           protein ZK1251.9 protein.
          Length = 1701

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +3

Query: 243 ERNCIEIVTKLIEL-KLIDVIFTNDGKEYLTSLQLIKEMKDELYVHGG 383
           E N +EI+   I+L K  DV  T D  +YLTSL + ++   E    GG
Sbjct: 344 EGNALEILFDYIDLEKSKDVRLTFDALKYLTSLLVHRKFALEFVNKGG 391


>Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical
           protein ZK1251.9 protein.
          Length = 1701

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +3

Query: 243 ERNCIEIVTKLIEL-KLIDVIFTNDGKEYLTSLQLIKEMKDELYVHGG 383
           E N +EI+   I+L K  DV  T D  +YLTSL + ++   E    GG
Sbjct: 344 EGNALEILFDYIDLEKSKDVRLTFDALKYLTSLLVHRKFALEFVNKGG 391


>U28735-1|AAG38886.2|  272|Caenorhabditis elegans Hypothetical
           protein F48E3.9 protein.
          Length = 272

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 3/142 (2%)
 Frame = +3

Query: 132 LSKQYSTMAPATDWDEIKRLAADFQKAQLSTTAQRLSERNCIEIVTKLIELKLIDVIFTN 311
           + K+   +APA    E+K +A D +K  LS    RL+  +   + T ++ L+  D + + 
Sbjct: 15  MQKRIDELAPACAEKELKIVAKDNEKLDLSKKL-RLANSDISHLQTSMMHLR--DEVSSK 71

Query: 312 DGKEYLTSLQLIKEMKDELYV---HGGRINTVDLAKELNVDFNHITTHIPEIVKGKDVQL 482
           D  E  +    I  +K +L +       +   DL  +  +      T   E+ +  D +L
Sbjct: 72  D-NELKSMNDDILYLKSQLLIVESESRELKAKDLENQERIHAYIQQTREYELTQINDKKL 130

Query: 483 ISGYLITNYYLEKIAREVNEKL 548
           I   +  N  L K   +V+ KL
Sbjct: 131 IDKVIEENSSLIKENAKVSTKL 152


>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
           protein Y45F10B.10 protein.
          Length = 1592

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +3

Query: 399 DLAKELNVDFN-HITTHIPEIVKGKDVQLISGYLITNYYLEKIAREVNEKLQ 551
           DL  E+ +  N  + TH+    +  D+         + Y EKIAR+ NEKL+
Sbjct: 257 DLKNEITLKMNDRVMTHVLR-PESTDINYFFNSRDGDKYREKIARQFNEKLK 307


>AF039052-10|AAF98634.1|  536|Caenorhabditis elegans Hypothetical
           protein T22D1.1 protein.
          Length = 536

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -3

Query: 522 FFPNNNL*SNNQISTEHLCLLQFPECA 442
           F PN N+   NQ   E  CLLQ+ E A
Sbjct: 236 FEPNGNIEWRNQAGAETDCLLQYKEAA 262


>Z77659-6|CAB01167.1|  401|Caenorhabditis elegans Hypothetical
           protein F23B12.6 protein.
          Length = 401

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +2

Query: 500 YKLLFGKNCQRSKRKVTASRLHIC-WGIN 583
           Y L + KNC  S   + ASR  +C WG+N
Sbjct: 69  YLLRYLKNCPSSYATLDASRSWMCYWGVN 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,595,745
Number of Sequences: 27780
Number of extensions: 296974
Number of successful extensions: 698
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)