Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0232
         (398 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical prote...    24   1.8  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   3.1  
DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       23   4.1  
Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein...    22   7.2  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    22   9.5  

>AJ439060-6|CAD27757.1|  297|Anopheles gambiae hypothetical protein
           protein.
          Length = 297

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +3

Query: 288 PREAWQGRRALHEDTASCGHFSL*RTHPTS 377
           P E  +GR +   D    GH S  RTH  S
Sbjct: 112 PEEKLRGRHSSESDREGMGHDSHKRTHRLS 141


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 3.1
 Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = -1

Query: 194 TIFATSSFEISKPSDF-AHTL 135
           T+  ++SFE+ KP DF  H+L
Sbjct: 845 TLTESTSFELKKPKDFRKHSL 865


>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 23.0 bits (47), Expect = 4.1
 Identities = 13/45 (28%), Positives = 19/45 (42%)
 Frame = +1

Query: 145 AKSEGFEISKDEVAKIVAGFENESLLTSGGVTIAGTRYIYLSGTD 279
           A +  F + KD +    A F  E    +GG T    RY   + T+
Sbjct: 180 AAAAEFPLQKDVIRVTNAVFVQEGFPLNGGFTYYSNRYYSSNATN 224


>Y08163-1|CAA69355.1|  192|Anopheles gambiae hypothetical protein
           protein.
          Length = 192

 Score = 22.2 bits (45), Expect = 7.2
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 299 LARSACIA*RHSKLWSFLSMKNPSNL 376
           +A+S CIA   +  W+  +  NP N+
Sbjct: 158 VAKSTCIALTPTGSWTLRNCLNPLNI 183


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 21.8 bits (44), Expect = 9.5
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 37   KNKTTLKHKIL 5
            KNKTTL H+I+
Sbjct: 1466 KNKTTLPHEII 1476


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 448,313
Number of Sequences: 2352
Number of extensions: 8746
Number of successful extensions: 51
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 31639662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)