Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0232
(398 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g19770.1 68415.m02310 profilin 4 (PRO4) (PFN4) identical to p... 89 1e-18
At4g29340.1 68417.m04192 profilin 3 (PRO3) (PFN3) identical to p... 85 2e-17
At5g56600.1 68418.m07065 profilin 5 (PRO5) (PRF3) identical to S... 84 4e-17
At4g29350.1 68417.m04193 profilin 2 (PRO2) (PFN2) (PRF2) identic... 81 3e-16
At2g19760.1 68415.m02309 profilin 1 (PRO1) (PFN1) (PRF1) / aller... 80 5e-16
At1g62420.1 68414.m07042 expressed protein contains Pfam profile... 31 0.21
At5g17850.1 68418.m02092 cation exchanger, putative (CAX8) simil... 29 1.1
At2g22950.1 68415.m02725 calcium-transporting ATPase, plasma mem... 28 2.0
At2g41560.1 68415.m05136 calcium-transporting ATPase 4, plasma m... 28 2.6
At4g37390.1 68417.m05294 auxin-responsive GH3 family protein sim... 27 3.5
At4g37640.1 68417.m05324 calcium-transporting ATPase 2, plasma m... 27 4.6
At1g27770.2 68414.m03396 calcium-transporting ATPase 1, plasma m... 27 6.1
At1g27770.1 68414.m03395 calcium-transporting ATPase 1, plasma m... 27 6.1
At1g23550.1 68414.m02962 expressed protein 27 6.1
At1g12940.1 68414.m01503 high-affinity nitrate transporter, puta... 27 6.1
At4g25130.1 68417.m03616 peptide methionine sulfoxide reductase,... 26 8.0
At4g04090.1 68417.m00578 speckle-type POZ protein-related contai... 26 8.0
>At2g19770.1 68415.m02310 profilin 4 (PRO4) (PFN4) identical to
profilin 4 SP:Q38905 GI:1353768 from [Arabidopsis
thaliana]
Length = 134
Score = 88.6 bits (210), Expect = 1e-18
Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 8/122 (6%)
Frame = +1
Query: 55 MSWQDYVDKQLMAS------RCVTKAAIAGHDGNVWAKSEGF-EISKDEVAKIVAGFENE 213
MSWQ YVD+ LM +T AAI GHDG+VWA+S F + E+ I+ F+
Sbjct: 1 MSWQAYVDEHLMCDVGDGQGHHLTAAAIIGHDGSVWAQSANFPQFKPQEITDIMKDFDEP 60
Query: 214 SLLTSGGVTIAGTRYIYLSGTDH-IIRAKLGKVGVHCMKTQQAVVISLYEEPIQPQQAAS 390
L G+ +AG +Y+ + G + +IR K G G+ KT Q++V LYEEP+ P Q
Sbjct: 61 GHLAPTGMFLAGLKYMVIQGEPNAVIRGKKGAGGITIKKTGQSMVFGLYEEPVTPGQCNM 120
Query: 391 VV 396
VV
Sbjct: 121 VV 122
>At4g29340.1 68417.m04192 profilin 3 (PRO3) (PFN3) identical to
profilin 3 SP:Q38904 GI:1353765 from [Arabidopsis
thaliana]
Length = 134
Score = 85.0 bits (201), Expect = 2e-17
Identities = 48/122 (39%), Positives = 66/122 (54%), Gaps = 8/122 (6%)
Frame = +1
Query: 55 MSWQDYVDKQLMAS------RCVTKAAIAGHDGNVWAKSEGF-EISKDEVAKIVAGFENE 213
MSWQ YVD+ LM +T AAI GHDG+VWA+S F + E + I+ F+
Sbjct: 1 MSWQTYVDEHLMCDVGDGQGHHLTAAAIVGHDGSVWAQSANFPQFKGQEFSDIMKDFDEP 60
Query: 214 SLLTSGGVTIAGTRYIYLSGTDH-IIRAKLGKVGVHCMKTQQAVVISLYEEPIQPQQAAS 390
L G+ +AG +Y+ + G +IR K G G+ KT Q+ V +YEEP+ P Q
Sbjct: 61 GHLAPTGLFMAGAKYMVIQGEPGAVIRGKKGAGGITIKKTGQSCVFGIYEEPVTPGQCNM 120
Query: 391 VV 396
VV
Sbjct: 121 VV 122
>At5g56600.1 68418.m07065 profilin 5 (PRO5) (PRF3) identical to
SP|Q9FE63 Profilin 5 {Arabidopsis thaliana}
Length = 168
Score = 83.8 bits (198), Expect = 4e-17
Identities = 47/119 (39%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
Frame = +1
Query: 55 MSWQDYVDKQLM---ASRCVTKAAIAGHDGNVWAKSEGF-EISKDEVAKIVAGFENESLL 222
MSWQ YVD LM A +T AAI G DG+VWA+S F ++ +E+ I F L
Sbjct: 38 MSWQTYVDDHLMCDVAGNRLTAAAILGQDGSVWAQSNNFPQVKPEEIQGIKDDFTTPGTL 97
Query: 223 TSGGVTIAGTRYIYLSGTDH-IIRAKLGKVGVHCMKTQQAVVISLYEEPIQPQQAASVV 396
G+ + G +Y+ + G + +IR K G GV KT A+V +Y+EP+ P Q VV
Sbjct: 98 APTGLFLGGNKYMVIQGEPNAVIRGKKGAGGVTIKKTTLALVFGIYDEPMTPGQCNMVV 156
>At4g29350.1 68417.m04193 profilin 2 (PRO2) (PFN2) (PRF2) identical
to profilin 2 SP:Q42418 GI:1353772 from [Arabidopsis
thaliana]; identical to cDNA profilin (PRF2) GI:9965570
Length = 131
Score = 81.0 bits (191), Expect = 3e-16
Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Frame = +1
Query: 55 MSWQDYVDKQLMAS---RCVTKAAIAGHDGNVWAKSEGF-EISKDEVAKIVAGFENESLL 222
MSWQ YVD LM +T AAI G DG+VWA+S F ++ E+A I FE L
Sbjct: 1 MSWQSYVDDHLMCEVEGNHLTHAAIFGQDGSVWAQSSAFPQLKPAEIAGINKDFEEAGHL 60
Query: 223 TSGGVTIAGTRYIYLSG-TDHIIRAKLGKVGVHCMKTQQAVVISLYEEPIQPQQAASVV 396
G+ + G +Y+ + G +IR K G GV KT QA+V +Y+EP+ Q VV
Sbjct: 61 APTGLFLGGEKYMVVQGEAGAVIRGKKGPGGVTIKKTTQALVFGIYDEPMTGGQCNLVV 119
>At2g19760.1 68415.m02309 profilin 1 (PRO1) (PFN1) (PRF1) / allergen
Ara t 8 identical to profilin 1 (Allergen Ara t 8)
SP:Q42449 GI:1353770 from [Arabidopsis thaliana]
Length = 131
Score = 80.2 bits (189), Expect = 5e-16
Identities = 47/119 (39%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
Frame = +1
Query: 55 MSWQDYVDKQLMAS---RCVTKAAIAGHDGNVWAKSEGF-EISKDEVAKIVAGFENESLL 222
MSWQ YVD LM +T AAI G DG+VWA+S F ++ E+ I FE L
Sbjct: 1 MSWQSYVDDHLMCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFL 60
Query: 223 TSGGVTIAGTRYIYLSGTDH-IIRAKLGKVGVHCMKTQQAVVISLYEEPIQPQQAASVV 396
G+ + G +Y+ + G +IR K G GV KT QA+V Y+EP+ Q VV
Sbjct: 61 APTGLFLGGEKYMVIQGEQGAVIRGKKGPGGVTIKKTNQALVFGFYDEPMTGGQCNLVV 119
>At1g62420.1 68414.m07042 expressed protein contains Pfam profile
PF04720: Protein of unknown function (DUF506)
Length = 465
Score = 31.5 bits (68), Expect = 0.21
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = +3
Query: 213 ITANEWRRDDSGHAVHLPQWHRPYHPREAWQGRRALHEDTASCGHFSL*RTHPTSAGRIC 392
I +E RR +H+P W R + + W G ++ T++ ++ + T+ T+A + C
Sbjct: 199 IMCHEMRRSMKHVGIHVPPWRRNGYMQAKWFG---FYKRTSTTNNYEMVNTYDTTAFKGC 255
Query: 393 R 395
+
Sbjct: 256 K 256
>At5g17850.1 68418.m02092 cation exchanger, putative (CAX8) similar
to sodium/calcium exchanger protein [Mus musculus]
gi|13925661|gb|AAK49407; Ca2+:Cation Antiporter (CaCA)
Family member PMID:11500563
Length = 559
Score = 29.1 bits (62), Expect = 1.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 287 MIWSVPLR*MYRVPAIVTPPLVSSDSFSKPATI 189
+IW++ L +P I+T P+VS D +SKP +
Sbjct: 307 VIWAITLP--LNLPRILTIPVVSEDKWSKPLAV 337
>At2g22950.1 68415.m02725 calcium-transporting ATPase, plasma
membrane-type, putative / Ca2+-ATPase, putative (ACA7)
identical to SP|O64806 Potential calcium-transporting
ATPase 7, plasma membrane-type (EC 3.6.3.8)
(Ca(2+)-ATPase isoform 7) {Arabidopsis thaliana}; strong
similarity to SP|O81108 Calcium-transporting ATPase 2,
plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform
2) {Arabidopsis thaliana}
Length = 1015
Score = 28.3 bits (60), Expect = 2.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 148 KSEGFEISKDEVAKIVAGFENESLLTSGGV 237
K+ GF+I DE+ IV G + + L GGV
Sbjct: 90 KAAGFDICADELGSIVEGHDVKKLKFHGGV 119
>At2g41560.1 68415.m05136 calcium-transporting ATPase 4, plasma
membrane-type / Ca2+-ATPase, isoform 4 (ACA4) identical
to SP|O22218 Calcium-transporting ATPase 4, plasma
membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 4)
{Arabidopsis thaliana}
Length = 1030
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 148 KSEGFEISKDEVAKIVAGFENESLLTSGGV 237
K GF I DE+A +V + +SL GGV
Sbjct: 89 KKAGFSIEADELASMVRKNDTKSLAQKGGV 118
>At4g37390.1 68417.m05294 auxin-responsive GH3 family protein
similar to auxin-responsive GH3 product [Glycine max]
GI:18591; contains Pfam profile PF03321: GH3
auxin-responsive promoter
Length = 603
Score = 27.5 bits (58), Expect = 3.5
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = +1
Query: 31 YF*LNLIKMSWQDYVDKQLMASRCVTKAAIAGHDGNVWAKSEGFEISKDEVAKIVAGFEN 210
YF +NL M V +M + + HDG+ A++ E S E+A + G E
Sbjct: 344 YFGINLKPMCKPSEVSYTIMPNMAYFEFLPHNHDGDGAAEASLDETSLVELANVEVGKEY 403
Query: 211 ESLLTS 228
E ++T+
Sbjct: 404 ELVITT 409
>At4g37640.1 68417.m05324 calcium-transporting ATPase 2, plasma
membrane-type / Ca(2+)-ATPase isoform 2 (ACA2) identical
to SP|O81108 Calcium-transporting ATPase 2, plasma
membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 2)
{Arabidopsis thaliana}
Length = 1014
Score = 27.1 bits (57), Expect = 4.6
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 148 KSEGFEISKDEVAKIVAGFENESLLTSGGV 237
K+ GFEI DE+ IV + + L GGV
Sbjct: 90 KAAGFEICADELGSIVESHDVKKLKFHGGV 119
>At1g27770.2 68414.m03396 calcium-transporting ATPase 1, plasma
membrane-type / Ca(2+)-ATPase isoform 1 (ACA1) / plastid
envelope ATPase 1 (PEA1) identical to SP|Q37145
Calcium-transporting ATPase 1, plasma membrane-type (EC
3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope
ATPase 1) {Arabidopsis thaliana}; identical to cDNA
envelope Ca2+-ATPase (PEA1) chloroplast gene encoding
chloroplast protein GI:509809
Length = 946
Score = 26.6 bits (56), Expect = 6.1
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 148 KSEGFEISKDEVAKIVAGFENESLLTSGG 234
+ GFEI DE+ IV G + + L GG
Sbjct: 92 RKAGFEICPDELGSIVEGHDLKKLKIHGG 120
>At1g27770.1 68414.m03395 calcium-transporting ATPase 1, plasma
membrane-type / Ca(2+)-ATPase isoform 1 (ACA1) / plastid
envelope ATPase 1 (PEA1) identical to SP|Q37145
Calcium-transporting ATPase 1, plasma membrane-type (EC
3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope
ATPase 1) {Arabidopsis thaliana}; identical to cDNA
envelope Ca2+-ATPase (PEA1) chloroplast gene encoding
chloroplast protein GI:509809
Length = 1020
Score = 26.6 bits (56), Expect = 6.1
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 148 KSEGFEISKDEVAKIVAGFENESLLTSGG 234
+ GFEI DE+ IV G + + L GG
Sbjct: 92 RKAGFEICPDELGSIVEGHDLKKLKIHGG 120
>At1g23550.1 68414.m02962 expressed protein
Length = 323
Score = 26.6 bits (56), Expect = 6.1
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 82 QLMASRCVTKAAIAGHDGNVWAKSEGFEISKDEVAKIVA-GFENESL 219
+ +A R T A H G+ K + S+DE+ +I++ GF N +
Sbjct: 92 KFLAFRIFTDAVARKHGGDANVKYGWYAGSRDEIQRIISYGFSNRDV 138
>At1g12940.1 68414.m01503 high-affinity nitrate transporter,
putative similar to trans-membrane nitrate transporter
protein AtNRT2:1 [Arabidopsis thaliana] GI:3747058,
high-affinity nitrate transporter ACH1 [Arabidopsis
thaliana] GI:3608362
Length = 502
Score = 26.6 bits (56), Expect = 6.1
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 130 DGNVWAKSEGFEISKDEVAKIVA-GFEN 210
DG+ WA + E KD+V K+++ G +N
Sbjct: 233 DGDYWAMHKSGEREKDDVGKVISNGIKN 260
>At4g25130.1 68417.m03616 peptide methionine sulfoxide reductase,
putative strong similarity to SP|P54151 Peptide
methionine sulfoxide reductase (EC 1.8.4.6) {Brassica
napus}; contains Pfam profile PF01625: Peptide
methionine sulfoxide reductase
Length = 258
Score = 26.2 bits (55), Expect = 8.0
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -1
Query: 242 IVTPPLVSSDSFSKPATIF--ATSSFEISKP 156
+V+PPL+++ S SKP A SF +KP
Sbjct: 5 VVSPPLIAAASLSKPLNSLSKAALSFSRAKP 35
>At4g04090.1 68417.m00578 speckle-type POZ protein-related contains
Pfam PF00651 : BTB/POZ domain; similar to Speckle-type
POZ protein (SP:O43791) [Homo sapiens]
Length = 192
Score = 26.2 bits (55), Expect = 8.0
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 31 YF*LNLIKMSWQDYVDKQLMASRCVTKAAIAGHDGNVWAKSEGFE 165
+F +K+ + VD +LMA AAI+ H + A+SE FE
Sbjct: 9 FFYDEFLKVLKEQQVDVRLMARDSEKDAAISAHKRILSARSEVFE 53
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,124,287
Number of Sequences: 28952
Number of extensions: 179495
Number of successful extensions: 433
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 423
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 575830496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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