Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0227
(543 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19071| Best HMM Match : Ribosomal_L4 (HMM E-Value=0) 202 1e-52
SB_35460| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.086
SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5) 33 0.11
SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45) 31 0.46
SB_49912| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2) 29 2.5
SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95) 29 2.5
SB_14427| Best HMM Match : Cadherin (HMM E-Value=0) 29 2.5
SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05) 28 4.3
SB_20534| Best HMM Match : DUF21 (HMM E-Value=9.8) 28 4.3
SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_13625| Best HMM Match : Reprolysin (HMM E-Value=2.3e-15) 28 4.3
SB_8252| Best HMM Match : rve (HMM E-Value=0.13) 28 4.3
SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08) 28 5.7
SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29) 28 5.7
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042) 28 5.7
SB_59069| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_34438| Best HMM Match : Ribosomal_L23eN (HMM E-Value=2) 27 7.5
>SB_19071| Best HMM Match : Ribosomal_L4 (HMM E-Value=0)
Length = 299
Score = 202 bits (493), Expect = 1e-52
Identities = 96/154 (62%), Positives = 110/154 (71%)
Frame = +3
Query: 78 ARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQT 257
ARP+++V++E E+ LP VFKAPIRPDLVN VH +++KN RQPY V+K AGHQT
Sbjct: 2 ARPVITVFNENGESA--GQTTLPAVFKAPIRPDLVNFVHSNIAKNKRQPYAVNKLAGHQT 59
Query: 258 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHXXXXXXXXXX 437
SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK WR+WH
Sbjct: 60 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRKWHTKVNVQQRRF 119
Query: 438 XXXXXXXXXXXXXXXQARGHIIEKIPELPLVVAD 539
ARGH IEKI E+PLV++D
Sbjct: 120 AVCSALAASALPALIMARGHRIEKIAEVPLVISD 153
>SB_35460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 511
Score = 33.9 bits (74), Expect = 0.086
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 351 YRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQPP 238
Y +HP T+ YH H R H Q+P + H + Q P
Sbjct: 232 YHQHPQVTHRYHQHPQVTH-RYHQQHPQVTHRYQYQHP 268
Score = 32.7 bits (71), Expect = 0.20
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 351 YRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQ 244
Y +HP T+ YHH H + ++ Q+P + H + Q
Sbjct: 413 YHQHPQLTHRYHHQ-HPQVIHRYHQHPQVTHRYHQQ 447
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -1
Query: 342 HPDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDQP 241
HP T+ YH H R H Q+P + H + P
Sbjct: 406 HPQVTHRYHQHPQLTH-RYHHQHPQVIHRYHQHP 438
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = -1
Query: 351 YRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 259
Y +HP T+ YH R Q+P + H
Sbjct: 242 YHQHPQVTHRYHQQHPQVTHRYQYQHPQVTH 272
>SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5)
Length = 612
Score = 33.5 bits (73), Expect = 0.11
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 366 HHDTCYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQHWF 253
HH CY H Y Y+ H H + R H YP +H++
Sbjct: 20 HHYCCYCHH---RYCYYRHHHYCWYRHHYHYPCYRHYY 54
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 372 YVHHDTCYRRHPDRTYEYHHHGH 304
Y HH CY RH + Y HH H
Sbjct: 25 YCHHRYCYYRHHHYCW-YRHHYH 46
>SB_11562| Best HMM Match : SelP_N (HMM E-Value=0.45)
Length = 453
Score = 31.5 bits (68), Expect = 0.46
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 366 HHDTCYRRHPDRTYEYHHHGHAEFGRQH 283
HH RH R + +HHH H E+ R+H
Sbjct: 325 HHQRHRHRHRHR-HRHHHHHHHEYNRRH 351
>SB_49912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 375 TYVHHDTCYRRHPDRTYEYHHHGHA 301
TY H DT R+HPD H HA
Sbjct: 123 TYTHQDTQMRKHPDTQIYVHAPRHA 147
>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
Length = 694
Score = 29.1 bits (62), Expect = 2.5
Identities = 9/35 (25%), Positives = 14/35 (40%)
Frame = -1
Query: 378 RTYVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQY 274
R + HH + H + +HHH H H +
Sbjct: 209 RHHQHHQHHHHHHHQHNHHHHHHNHHHHHHHHYHH 243
>SB_37045| Best HMM Match : Drf_FH1 (HMM E-Value=0.95)
Length = 1080
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 255 TSAESWGTGRAVARIPR-VRGGGTHRSGQGAFGNMCRGGR 371
T +E +G ++ R PR RGGG G G G RGGR
Sbjct: 983 TPSEPSSSGSSIVRRPRRRRGGGGGGGGGGGGGGGRRGGR 1022
>SB_14427| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2325
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +3
Query: 174 DLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARI 299
D+ NDV ++++ + PY + H T E TG+ +A++
Sbjct: 2034 DVTNDVTINVTDVNEAPYDIRLVPSHVTVKEDIRTGQCIAQV 2075
>SB_53717| Best HMM Match : Furin-like (HMM E-Value=0.05)
Length = 1098
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +3
Query: 273 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRR 401
G GR + R P GGG R G +G M GG P W R
Sbjct: 271 GQGRGMGRGP---GGGWGRGSGGGWGRMQGGGMGRGPGGGWGR 310
>SB_20534| Best HMM Match : DUF21 (HMM E-Value=9.8)
Length = 193
Score = 28.3 bits (60), Expect = 4.3
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 366 HHDTCYRRHPDRTYEYHHH 310
HH YR H + Y +HHH
Sbjct: 96 HHHQHYRHHRHQHYRHHHH 114
>SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3486
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 145 GRGLAAPCTVSLFSEYTDTKGRATDRLI 62
G+GL C+V+L S Y T+G+ RL+
Sbjct: 3163 GKGLTTWCSVNLDSVYLSTEGKEVYRLV 3190
>SB_13625| Best HMM Match : Reprolysin (HMM E-Value=2.3e-15)
Length = 715
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 168 RPDLVNDVHVSMSKNSRQPYC-VSKEAGHQTSAESWGTGRAV 290
RP +SM K R+PY + +E GH+ S T R V
Sbjct: 156 RPGCDTHEKISMEKRKREPYLELIRETGHERQRRSVSTERNV 197
>SB_8252| Best HMM Match : rve (HMM E-Value=0.13)
Length = 264
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 372 YVHHDTCYRRHPDRTYEYHHHGH 304
Y HH +RR R + +HHH H
Sbjct: 233 YHHHHHHHRRRRRRRHHHHHHHH 255
>SB_16091| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-08)
Length = 839
Score = 27.9 bits (59), Expect = 5.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 366 HHDTCYRRHPDRTYEYHHH 310
HH + RH R + YHHH
Sbjct: 570 HHHLHHHRHHHRHHHYHHH 588
>SB_9657| Best HMM Match : P_proprotein (HMM E-Value=7.5e-29)
Length = 1779
Score = 27.9 bits (59), Expect = 5.7
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 366 HHDTCYRRHPDRTYEYHHHGH 304
HH + RH DR + + HH H
Sbjct: 340 HHRNKHYRHHDRNHHHRHHHH 360
>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -1
Query: 354 CYRRHPDRTYEYHHHGHAEFGRQHVQYPMIQH 259
CY + + + YHHH H H Q+ H
Sbjct: 246 CYHKLKNPRHRYHHHHHHHHQHNHHQHHHHHH 277
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -1
Query: 372 YVHHDTCYRRHPDRTYEYHHHGHAEFGRQHVQ 277
Y HH + +H + +HHH H H Q
Sbjct: 257 YHHHHHHHHQHNHHQHHHHHHHHHHNHHHHHQ 288
>SB_29069| Best HMM Match : Furin-like (HMM E-Value=0.042)
Length = 628
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +3
Query: 270 WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRR 401
WG G+ + R GGG R G +G M GG P W R
Sbjct: 24 WGRGQG-GGMGRGPGGGWGRGSGGGWGRMQGGGMGRGPGGGWGR 66
>SB_59069| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 664
Score = 27.5 bits (58), Expect = 7.5
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -1
Query: 375 TYVHHDTCYRRHPDRTYEYHHHGHA 301
TY H DT +HPD H HA
Sbjct: 323 TYTHQDTQMHKHPDTQMYVHAPRHA 347
>SB_34438| Best HMM Match : Ribosomal_L23eN (HMM E-Value=2)
Length = 772
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +3
Query: 213 SRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF-GNMCRGGRMFAP 383
SRQPY + GH G G P +RGG + G G G G R AP
Sbjct: 110 SRQPYGPGRGRGHPNGRPMQGRGMQ----PGIRGGMMPQQGPGVRPGFPPAGSRQMAP 163
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,996,415
Number of Sequences: 59808
Number of extensions: 329847
Number of successful extensions: 1070
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1239956166
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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