Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0226
(716 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatas... 354 8e-99
SPCC31H12.05c |sds21||serine/threonine protein phosphatase Sds21... 333 2e-92
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 275 5e-75
SPAC823.15 |ppa1||minor serine/threonine protein phosphatase Ppa... 188 9e-49
SPBC16H5.07c |ppa2||serine/threonine protein phosphatase Ppa2|Sc... 187 1e-48
SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces ... 178 7e-46
SPBP4H10.04 |ppb1||calcineurin catalytic subunit Ppb1|Schizosacc... 178 7e-46
SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatas... 176 2e-45
SPBC26H8.05c |||serine/threonine protein phosphatase |Schizosacc... 172 5e-44
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 134 9e-33
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 30 0.29
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 30 0.38
SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit Rev3|Sch... 29 0.66
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 29 0.66
SPAC19A8.08 |upf2||nonsense-mediated decay protein Upf2|Schizosa... 27 2.0
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 27 2.0
SPBC359.02 |alr2||alanine racemase Alr2 |Schizosaccharomyces pom... 26 4.7
SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual 26 4.7
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 26 6.2
SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|ch... 26 6.2
SPAC3A11.02 |cps3|mug188|zinc finger protein Cps3|Schizosaccharo... 25 8.2
>SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatase
PP1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 354 bits (870), Expect = 8e-99
Identities = 156/187 (83%), Positives = 176/187 (94%)
Frame = +1
Query: 154 ELNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDI 333
++++D++I +LL+VRG +PG VQL+E EI+ LC K+REIF+SQPILLELEAPLKICGDI
Sbjct: 5 DVDLDSIIDRLLEVRGSRPGRQVQLSEDEIRFLCNKAREIFISQPILLELEAPLKICGDI 64
Query: 334 HGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 513
HGQYYDLLRLFEYGGFPPE+NYLFLGDYVDRGKQSLE ICLLLAYKIKYPENFF+LRGNH
Sbjct: 65 HGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLEVICLLLAYKIKYPENFFILRGNH 124
Query: 514 ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQ 693
ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP+AAI+DEKIF HGGLSPDL +M+Q
Sbjct: 125 ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFTMHGGLSPDLNSMDQ 184
Query: 694 IRRIMRP 714
I+RIMRP
Sbjct: 185 IQRIMRP 191
>SPCC31H12.05c |sds21||serine/threonine protein phosphatase
Sds21|Schizosaccharomyces pombe|chr 3|||Manual
Length = 322
Score = 333 bits (818), Expect = 2e-92
Identities = 147/187 (78%), Positives = 168/187 (89%)
Frame = +1
Query: 154 ELNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDI 333
+ +ID +I+KL+K R KP VQL++ EI+ LC SR IFLSQP+LLELEAPLKICGDI
Sbjct: 2 DYDIDAIIEKLVKARNGKPSKQVQLSDAEIRYLCTTSRSIFLSQPMLLELEAPLKICGDI 61
Query: 334 HGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 513
HGQY DLLRLFEYGG+PP++NYLFLGDYVDRGKQSLE ICLL AYKIKYPENFFLLRGNH
Sbjct: 62 HGQYSDLLRLFEYGGYPPDANYLFLGDYVDRGKQSLEVICLLFAYKIKYPENFFLLRGNH 121
Query: 514 ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQ 693
E ASINRIYGFYDECKRRY+IKLWKTFTDCFNC+PVAA++DEKIFC HGGLSPDL +++Q
Sbjct: 122 EFASINRIYGFYDECKRRYSIKLWKTFTDCFNCMPVAAVIDEKIFCMHGGLSPDLNSLDQ 181
Query: 694 IRRIMRP 714
I+RI+RP
Sbjct: 182 IQRIIRP 188
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 275 bits (674), Expect = 5e-75
Identities = 126/187 (67%), Positives = 146/187 (78%), Gaps = 1/187 (0%)
Frame = +1
Query: 157 LNIDNVIKKLLKVR-GEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDI 333
LN+D +I++L+ V K +V L EI +C+ REIFLSQP LLEL P+KI GD+
Sbjct: 190 LNVDEMIQRLIHVGYSRKSSKSVCLKNAEITSICMAVREIFLSQPTLLELTPPVKIVGDV 249
Query: 334 HGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 513
HGQY DL+RLFE GFPP SNYLFLGDYVDRGKQSLETI LL YKI+YPENFFLLRGNH
Sbjct: 250 HGQYSDLIRLFEMCGFPPSSNYLFLGDYVDRGKQSLETILLLFLYKIRYPENFFLLRGNH 309
Query: 514 ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQ 693
ECA+I R+YGFYDECKRR NIK+WKTF + FNCLP+A++V KIFC HGGLSP L M+
Sbjct: 310 ECANITRVYGFYDECKRRCNIKIWKTFINTFNCLPIASVVAGKIFCVHGGLSPSLSHMDD 369
Query: 694 IRRIMRP 714
IR I RP
Sbjct: 370 IREIPRP 376
>SPAC823.15 |ppa1||minor serine/threonine protein phosphatase
Ppa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 188 bits (457), Expect = 9e-49
Identities = 76/163 (46%), Positives = 118/163 (72%), Gaps = 1/163 (0%)
Frame = +1
Query: 226 LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 405
L+E ++ +C ++E+ + + + P+ +CGDIHGQ++DL+ LF GG P++NYLF
Sbjct: 23 LSEEDVIQMCDLAKEVLSVESNVQSVRCPVTVCGDIHGQFHDLMELFNIGGPSPDTNYLF 82
Query: 406 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 582
+GDYVDRG S+ET+ LL+A+KI+YP+ +LRGNHE I ++YGFYDEC R+Y N +
Sbjct: 83 MGDYVDRGYHSVETVSLLIAFKIRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANV 142
Query: 583 WKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIMR 711
W+ FTD F+ LP+ A+++++IFC HGGLSP + ++ +R + R
Sbjct: 143 WQYFTDLFDYLPLTALIEDRIFCLHGGLSPSIDTLDHVRILDR 185
>SPBC16H5.07c |ppa2||serine/threonine protein phosphatase
Ppa2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 187 bits (456), Expect = 1e-48
Identities = 76/163 (46%), Positives = 118/163 (72%), Gaps = 1/163 (0%)
Frame = +1
Query: 226 LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 405
L+E +++ LC K+RE+ + + + P+ +CGDIHGQ++DL+ LF+ GG P+ NYLF
Sbjct: 36 LSEADVEMLCDKAREVLCQENNVQPVRNPVTVCGDIHGQFHDLMELFKIGGDVPDMNYLF 95
Query: 406 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 582
+GDYVDRG S+ET+ LL+A K++YP +LRGNHE I ++YGFYDEC R+Y + +
Sbjct: 96 MGDYVDRGYHSVETVSLLVAMKLRYPNRITILRGNHESRQITQVYGFYDECLRKYGSANV 155
Query: 583 WKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIMR 711
WK FT+ F+ P+ A+++++IFC HGGLSP + +++ +R + R
Sbjct: 156 WKHFTNLFDYFPLTALIEDRIFCLHGGLSPSIDSLDHVRTLDR 198
>SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 307
Score = 178 bits (433), Expect = 7e-46
Identities = 83/181 (45%), Positives = 120/181 (66%), Gaps = 1/181 (0%)
Frame = +1
Query: 157 LNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIH 336
+++DN+I++L + + + E I LC ++E+ + + ++ L P+ + GDIH
Sbjct: 2 IDLDNIIERLYEKQ--------LIAESVIAYLCSLAKEVLMQESNVVRLSTPITVVGDIH 53
Query: 337 GQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 516
GQ+ DLL +F GG P +NYLFLGDYVDRG S+ETI LL+ K++YP+ LLRGNHE
Sbjct: 54 GQFDDLLEIFRIGGPCPYTNYLFLGDYVDRGYYSIETITLLICLKLRYPKRITLLRGNHE 113
Query: 517 CASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQ 693
I + YGFY EC R+Y N +WK FTD F+ L ++A +D+ IFC HGGLSP +Q ++Q
Sbjct: 114 SRGITQTYGFYSECLRKYGNANVWKYFTDIFDFLTLSATIDDTIFCVHGGLSPSIQHIDQ 173
Query: 694 I 696
I
Sbjct: 174 I 174
>SPBP4H10.04 |ppb1||calcineurin catalytic subunit
Ppb1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 554
Score = 178 bits (433), Expect = 7e-46
Identities = 81/163 (49%), Positives = 112/163 (68%)
Frame = +1
Query: 223 QLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 402
+L+E + + K+ EI S+ L+E++AP+ +CGDIHGQYYDL++LFE GG P + YL
Sbjct: 84 RLSEEQTLYIIKKATEILKSEDNLIEVDAPVTVCGDIHGQYYDLMKLFEVGGNPANTQYL 143
Query: 403 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKL 582
FLGDYVDRG S+E + L A KI YP+ +LLRGNHECA + + F EC +YNIK+
Sbjct: 144 FLGDYVDRGYFSIECLLYLWALKIWYPKTLWLLRGNHECAHLTDYFTFKLECTHKYNIKV 203
Query: 583 WKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIMR 711
++ FN LP+AAI++++ C HGGLSP+L + IR I R
Sbjct: 204 YEACLQSFNALPLAAIMNKQFLCVHGGLSPELHTLNDIRMINR 246
>SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatase
Ppe1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 305
Score = 176 bits (429), Expect = 2e-45
Identities = 77/163 (47%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
Frame = +1
Query: 226 LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 405
L E ++K LC + I + + + + P+ +CGDIHGQ+YDLL LF GG P +NY+F
Sbjct: 17 LPEHQLKRLCEMVKVILMEESNIQPVRTPVTVCGDIHGQFYDLLELFRVGGELPSTNYIF 76
Query: 406 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 582
+GD+VDRG SLET L + K +YP+ LLRGNHE I ++YGFYDEC+ +Y N +
Sbjct: 77 MGDFVDRGYFSLETFTLFMLLKARYPDKITLLRGNHESRQITQVYGFYDECQTKYGNANV 136
Query: 583 WKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIMR 711
WK F+ L +AA++D KI C HGGLSP+++ ++QIR + R
Sbjct: 137 WKYCCQVFDFLTLAAVIDNKILCVHGGLSPEVRTLDQIRILAR 179
>SPBC26H8.05c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 172 bits (418), Expect = 5e-44
Identities = 77/163 (47%), Positives = 109/163 (66%), Gaps = 1/163 (0%)
Frame = +1
Query: 226 LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 405
+ E + LC + R+I + + + + +P+ ICGDIHGQ +DLL LF GG P + YLF
Sbjct: 19 IPESNVVELCQRVRDILIEESNIQWISSPVTICGDIHGQLHDLLELFRIGGSCPGTKYLF 78
Query: 406 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 582
LGD+VDRG S+ET LLL K KYP+ L+RGNHE I ++YGFYDEC R+Y + +
Sbjct: 79 LGDFVDRGFYSVETFLLLLTLKCKYPKEMTLIRGNHESRQITQVYGFYDECVRKYGSANV 138
Query: 583 WKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIMR 711
W+ + F+ L + A+VD K+FC HGGLSP + +++QIR + R
Sbjct: 139 WRYCCEIFDYLSLGALVDGKVFCVHGGLSPSISSIDQIRLLDR 181
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 134 bits (325), Expect = 9e-33
Identities = 64/155 (41%), Positives = 96/155 (61%), Gaps = 6/155 (3%)
Frame = +1
Query: 265 REIFLSQPILLEL----EAPLKICGDIHGQYYDLLRLFEYGGFP-PESNYLFLGDYVDRG 429
+E+ P L+++ + L ICGD HGQY+DLL +F+ G P P + YLF GD+VDRG
Sbjct: 192 KELLEKTPSLIDIPVKGDETLVICGDTHGQYFDLLNIFKLHGPPSPTNKYLFNGDFVDRG 251
Query: 430 KQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFN 609
S E L AYK+ YP+ F+ RGNHE +N++YGF EC+ +YN + + F++ F+
Sbjct: 252 SWSTEVAFTLYAYKLLYPDAVFINRGNHETDDMNKVYGFEGECRSKYNERTFNIFSETFS 311
Query: 610 CLPVAAIVDEKIFCCHGGL-SPDLQAMEQIRRIMR 711
LP+ +++ + HGGL S D ++Q+R I R
Sbjct: 312 LLPLGSLISDSYLVVHGGLFSDDNVTLDQLRNIDR 346
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 30.3 bits (65), Expect = 0.29
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = -1
Query: 392 DSGGKPPYSNNLKRS*YCPCMSPQIFKGASSSSSIGCDKNISLDFKHSPL-ISISVN*TF 216
DS PP + + P P I ++SSS + NIS + + S + S+S N
Sbjct: 157 DSVNSPPSYGIMASATNQPLSHPTIVPSSNSSSLLNSTNNISHNPQVSLMSASLSKNLVL 216
Query: 215 IPGFSPRTFSNFFITLSMFNSSVSLSAIGY 126
P SP++ S + +S N VS +A Y
Sbjct: 217 DPA-SPKSVSPDLVYVSSDNPPVSTAASAY 245
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 29.9 bits (64), Expect = 0.38
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 112 RTHTIYPMADRDTDELNIDNVIKKLL-KVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQP 288
+THTI + R D I ++ LL +V G K MNV ++ ++ K R++ + P
Sbjct: 140 KTHTI---SGRPDDPGIIFLTMRALLDRVEGLKRTMNVDISVSYLEIYNEKIRDLLVQDP 196
Query: 289 ILLELEAPLKICGD 330
+ +E L IC D
Sbjct: 197 LSMEKPKSLNICED 210
>SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit
Rev3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1480
Score = 29.1 bits (62), Expect = 0.66
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +1
Query: 598 DCFNCLPVAAIVDEKIFCC-HGGLSPD 675
D ++C+ + A+ ++FCC HGGL+PD
Sbjct: 646 DPYSCVRILAL---ELFCCSHGGLTPD 669
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 29.1 bits (62), Expect = 0.66
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = +1
Query: 235 IEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRL------FEYGGFPPESN 396
+++K + ++ +FL+ P + +LE L+ G + L RL EY P +
Sbjct: 122 LQVKASPIDAQYVFLAPPSIEQLEVRLRGRGT-ENESAILQRLERARAEIEYSEKPGNFD 180
Query: 397 YLFLGDYVDRGKQSLETICL 456
L + D V++ + LE ICL
Sbjct: 181 ALIVNDDVEKAYKQLEAICL 200
>SPAC19A8.08 |upf2||nonsense-mediated decay protein
Upf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1049
Score = 27.5 bits (58), Expect = 2.0
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -2
Query: 190 LVIFLLRYRCLTHLCLCLPSDILYVYEIWLNRIGKRREMFKIFADYE 50
++ +LL Y+C + +P D+LY +E + IG R K++ YE
Sbjct: 820 MLTYLLAYQCYFLIQPEMPLDMLYEFE---DVIGYVRPSMKVYMHYE 863
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 27.5 bits (58), Expect = 2.0
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 522 GTLVVSA*KKEILGIFNLVGEEQAYCFQRLLATVHIVSEE 403
G+L+ K ++NL G YCF RL T++ EE
Sbjct: 987 GSLLDDGTKLSDRSVYNLFGNMSLYCFFRLFHTLYSRLEE 1026
>SPBC359.02 |alr2||alanine racemase Alr2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 370
Score = 26.2 bits (55), Expect = 4.7
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +1
Query: 475 KYPENFFLLRGNHECASINRI--YGFYD-ECKRRYNIKLWKTFTDCFNCLP 618
+Y + + LL+ + + I + + F D K Y +K W+ F CLP
Sbjct: 144 EYADKYRLLKNHKNVSGIVKATHFAFADIPEKSEYTLKQWRIFEKAAGCLP 194
>SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 26.2 bits (55), Expect = 4.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 332 MSPQIFKGASSSSSIGCDKNISLD 261
+S Q+FK SS S + CD+ ++D
Sbjct: 567 VSVQVFKDGSSDSEVRCDEYAAVD 590
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 25.8 bits (54), Expect = 6.2
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +2
Query: 383 LRSPTISSSETMWTVASSRWKQYACSSPTRLNI 481
+R+ I S+ +W+ A W Y+ P R+ +
Sbjct: 2097 VRACFIQGSQQVWSAALWYWGSYSTDKPNRMGV 2129
>SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|chr
3|||Manual
Length = 923
Score = 25.8 bits (54), Expect = 6.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 376 GFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKY 480
GF + + L LG Y RGKQS + L ++ Y
Sbjct: 482 GFGEDLDCLILGGYFGRGKQSGKINSFLCGLRMDY 516
>SPAC3A11.02 |cps3|mug188|zinc finger protein
Cps3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 583
Score = 25.4 bits (53), Expect = 8.2
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -1
Query: 332 MSPQIFKGASSSSSIGCDKNISLDFKHSPLISISVN*TFIPGFSPRTFS 186
+SP F + +I +++SL K P+++ S + + PGFS TF+
Sbjct: 266 ISPASFGSGIRTRNIFNPESMSLGLK-PPILNRSYSASMAPGFSMNTFT 313
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,063,998
Number of Sequences: 5004
Number of extensions: 65764
Number of successful extensions: 197
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 335201398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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