Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0225
(727 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 148 5e-36
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 3e-17
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 63 3e-10
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 62 6e-10
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 51 1e-06
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 48 6e-06
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 46 2e-05
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 46 3e-05
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 46 4e-05
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 44 1e-04
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 44 1e-04
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 44 2e-04
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 42 5e-04
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 41 9e-04
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 41 9e-04
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 40 0.002
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 39 0.004
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 39 0.005
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 38 0.011
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.011
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.014
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 36 0.044
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 35 0.077
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.31
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061) 32 0.54
SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35) 31 0.72
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 31 1.3
SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17) 31 1.3
SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 30 1.7
SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 30 1.7
SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) 30 2.2
SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) 30 2.2
SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039) 30 2.2
SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7) 29 2.9
SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0) 29 2.9
SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 29 3.8
SB_3524| Best HMM Match : ETS_PEA3_N (HMM E-Value=5.8) 29 5.1
SB_45236| Best HMM Match : PRP38 (HMM E-Value=0) 29 5.1
SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) 28 6.7
SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) 28 6.7
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 28 6.7
SB_26302| Best HMM Match : Reg_prop (HMM E-Value=3.1e-06) 28 8.9
SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 8.9
SB_18153| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=5) 28 8.9
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 148 bits (358), Expect = 5e-36
Identities = 85/171 (49%), Positives = 104/171 (60%), Gaps = 4/171 (2%)
Frame = +3
Query: 225 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQG 401
F ++F G +A +SKTA APIERVKLL+Q Q + K D YKG++D R + +G
Sbjct: 9 FVENFGLSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEG 68
Query: 402 LLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRY-FXXXXXXXXXXXX 578
LSFWRGN AN IRYFPTQALNFAFKD+ K +F KKT F
Sbjct: 69 FLSFWRGNLANCIRYFPTQALNFAFKDQVKALF---KPKKTDSNAIKFSKNIASGGAAGA 125
Query: 579 TSLCFVYPLDFARTRLAAD--VGKGDGQREFSGLGNCISKIFKSDGLIGLY 725
SL FVY LD+ RTRLA D VGK G+R+F+G+ + K SDGL+GLY
Sbjct: 126 MSLFFVYSLDYCRTRLANDAKVGKKGGERQFNGMIDVYKKTIASDGLVGLY 176
Score = 37.9 bits (84), Expect = 0.008
Identities = 33/171 (19%), Positives = 69/171 (40%)
Frame = +3
Query: 210 ADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIP 389
++ + F+K+ +GG + A+S V ++ + L + ++++ G++D + +
Sbjct: 108 SNAIKFSKNIASGGAAGAMSLFFVYSLDYCRTRLANDAKVGKKGGERQFNGMIDVYKKTI 167
Query: 390 KEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXX 569
GL+ +RG + + + F D K + LG + F
Sbjct: 168 ASDGLVGLYRGFVISCVGIIVYRGFYFGLYDTLKPILLG---EDAGVVISFVLGYGVTVS 224
Query: 570 XXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGL 722
S YP+D R R+ G+ ++ G +C +I K +G + L
Sbjct: 225 AGLAS----YPIDTIRRRMMMTSGEA---VKYKGSIDCTIQILKKEGAMSL 268
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/51 (31%), Positives = 32/51 (62%)
Frame = +3
Query: 351 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 503
+YKG +D ++I K++G +S +G AN++R + F DK+K++++
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVLAGF-DKFKELYV 297
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 85.8 bits (203), Expect = 3e-17
Identities = 40/88 (45%), Positives = 63/88 (71%)
Frame = +3
Query: 231 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 410
K LAGGI+ AVS+T+V+P+ERVK+LLQ+Q + ++KG++ ++I KE+G+L
Sbjct: 36 KHLLAGGIAGAVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILG 89
Query: 411 FWRGNFANVIRYFPTQALNFAFKDKYKQ 494
+++GN NVIR FP A+ FA ++YK+
Sbjct: 90 YFKGNGTNVIRIFPYSAVQFAAYEEYKK 117
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 73.7 bits (173), Expect = 1e-13
Identities = 57/160 (35%), Positives = 80/160 (50%)
Frame = +3
Query: 246 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 425
GG A VS+TA AP++R+K+LLQVQ A+ GIV F + +E G+ S WRGN
Sbjct: 143 GGALAGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRGN 196
Query: 426 FANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPL 605
ANVI+ P + F +K K+ L G D K TS +YPL
Sbjct: 197 GANVIKIAPESGIKFFAYEKAKK--LVGSDTKALGVTDRLLAGSMAGVASQTS---IYPL 251
Query: 606 DFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLY 725
+ +TRLA + GQ + GL + S I++ +G+ Y
Sbjct: 252 EVLKTRLAI---RKTGQ--YRGLLHAASVIYQKEGIRSFY 286
Score = 54.8 bits (126), Expect = 7e-08
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 1/163 (0%)
Frame = +3
Query: 240 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 419
LAG ++ S+T++ P+E +K L ++ + Y+G++ A I +++G+ SF+R
Sbjct: 235 LAGSMAGVASQTSIYPLEVLKTRLAIRKTGQ-------YRGLLHAASVIYQKEGIRSFYR 287
Query: 420 GNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVY 599
G F +++ P ++ A + K +L ++ L Y
Sbjct: 288 GLFPSLLGIIPYAGIDLAVYETLKNFYLNYHKNQSADPGVLVLLACGTASSTCGQLA-SY 346
Query: 600 PLDFARTRLAADV-GKGDGQREFSGLGNCISKIFKSDGLIGLY 725
PL RTRL A KG GQ + + + + KI DG GLY
Sbjct: 347 PLSLVRTRLQAQAREKGGGQGD--NMVSVLRKIITEDGFKGLY 387
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 62.9 bits (146), Expect = 3e-10
Identities = 40/170 (23%), Positives = 79/170 (46%), Gaps = 1/170 (0%)
Frame = +3
Query: 219 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQ 398
+ + + FL GG SA ++++ +P+E VK+L QV + G++ F + K +
Sbjct: 56 ITWFQSFLCGGTSAVLARSLTSPLEVVKVLAQV-------GTQEAKPGLIRTFASVYKRE 108
Query: 399 GLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXX 578
G+ +FW+GN + IR FP A+ +A ++ + ++
Sbjct: 109 GIKAFWKGNGVSCIRLFPYSAVQYAAFNR----IVASLEDPHNGELSDSGSMLAGTSSTL 164
Query: 579 TSLCFVYPLDFARTRLAAD-VGKGDGQREFSGLGNCISKIFKSDGLIGLY 725
++ VYP + +TRL V K + + G+ + + I + +G++ LY
Sbjct: 165 IAMVTVYPCEVIKTRLTVQHVNKSNA--HYKGMRHALKTILREEGILALY 212
Score = 45.2 bits (102), Expect = 5e-05
Identities = 25/71 (35%), Positives = 40/71 (56%)
Frame = +3
Query: 240 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 419
LAG S ++ V P E +K L VQHV+K ++ YKG+ A I +E+G+L+ ++
Sbjct: 157 LAGTSSTLIAMVTVYPCEVIKTRLTVQHVNK---SNAHYKGMRHALKTILREEGILALYK 213
Query: 420 GNFANVIRYFP 452
G + + FP
Sbjct: 214 GVTPSFLGLFP 224
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 61.7 bits (143), Expect = 6e-10
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +3
Query: 198 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDA 374
MS + F ++F G +A +SKTA APIERVKLL+Q Q + K YKG+VD
Sbjct: 1 MSGKKQNLHFVENFALSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDC 60
Query: 375 FVRIPKEQGLLSFWR 419
+R + +G+ SFWR
Sbjct: 61 TMRTYRAEGIGSFWR 75
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 50.8 bits (116), Expect = 1e-06
Identities = 37/158 (23%), Positives = 69/158 (43%)
Frame = +3
Query: 243 AGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 422
AG ++ +AP++ VK+ LQ+Q +K+ + Y+G VD V++ + +GL ++G
Sbjct: 39 AGSVAGLAQVPLIAPVDLVKIKLQMQTEAKR-STRSVYRGPVDCLVKLYRSRGLAGCFQG 97
Query: 423 NFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYP 602
N +R P A+ F + F R S +P
Sbjct: 98 NTVTAVRDIPGFAVYFGVYELLCDWFSNLFGS-----RGVATYLMAGGFAGVVSWASTFP 152
Query: 603 LDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLI 716
D ++R+ AD G+ + G+ +C + +K +G+I
Sbjct: 153 FDVIKSRIQADGNL--GKFRYKGMMDCALQSYKEEGMI 188
Score = 41.5 bits (93), Expect = 7e-04
Identities = 28/90 (31%), Positives = 45/90 (50%)
Frame = +3
Query: 201 SNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFV 380
SNL A +AGG + VS + P + +K +Q + RYKG++D +
Sbjct: 124 SNLFGSRGVATYLMAGGFAGVVSWASTFPFDVIKSRIQADGNLGKF----RYKGMMDCAL 179
Query: 381 RIPKEQGLLSFWRGNFANVIRYFPTQALNF 470
+ KE+G++ F RG + ++R F Q L F
Sbjct: 180 QSYKEEGMIVFTRGIWPTLLRGF-LQVLRF 208
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 48.4 bits (110), Expect = 6e-06
Identities = 30/124 (24%), Positives = 58/124 (46%)
Frame = +3
Query: 354 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFW 533
Y + +A R+ KE+G+L+ WRG +R A A + KQ+ L +
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQLLLSTKYFEDNIV 94
Query: 534 RYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGL 713
+F S+ P+D A+TR+ ++ DG+ E+ G + +++I +++G+
Sbjct: 95 CHFGASMISGLATTVASM----PVDIAKTRI-QNMRIIDGKPEYKGTMDVLARIVRNEGV 149
Query: 714 IGLY 725
L+
Sbjct: 150 FALW 153
Score = 40.3 bits (90), Expect = 0.002
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 3/94 (3%)
Frame = +3
Query: 237 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 416
F A IS + A P++ K +Q + I YKG +D RI + +G+ + W
Sbjct: 97 FGASMISGLATTVASMPVDIAKTRIQNMRI---IDGKPEYKGTMDVLARIVRNEGVFALW 153
Query: 417 RGNFANVIRYFPTQALNFAFKDKYKQV---FLGG 509
+G R P L F F ++ + F GG
Sbjct: 154 KGFTPYYFRIGPHTVLTFIFLEQLNRAANYFYGG 187
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 46.4 bits (105), Expect = 2e-05
Identities = 39/164 (23%), Positives = 64/164 (39%), Gaps = 2/164 (1%)
Frame = +3
Query: 240 LAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 416
+ G+S+ V +A+A P + VK+ Q + + I YK + AF +I K++G L W
Sbjct: 118 IVAGVSSGVIGSAIATPTDLVKIRFQAVKIGETIP----YKNMFHAFYKIAKKEGFLGLW 173
Query: 417 RGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFV 596
G V R D K + L + + + C
Sbjct: 174 TGMKPTVKRAACISGTQIPTYDHTKHLLLNAELMREGVALHL----ASALVAGFVATCVA 229
Query: 597 YPLDFARTRLAADVGKGDGQ-REFSGLGNCISKIFKSDGLIGLY 725
P+D RTR G+ + G +CI K + +G++ LY
Sbjct: 230 SPVDIVRTRFMTQPKDTKGRPLVYQGTLDCIYKTVRHEGILALY 273
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 240 LAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 416
LA + A T VA P++ V+ Q + Y+G +D + + +G+L+ +
Sbjct: 215 LASALVAGFVATCVASPVDIVRTRFMTQPKDTK-GRPLVYQGTLDCIYKTVRHEGILALY 273
Query: 417 RGNFANVIR 443
+G F N R
Sbjct: 274 KGFFPNWTR 282
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 46.0 bits (104), Expect = 3e-05
Identities = 40/180 (22%), Positives = 78/180 (43%), Gaps = 9/180 (5%)
Frame = +3
Query: 213 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAA---------DQRYKGI 365
DP K F + GI+A++++ A PI+ K+ LQ+Q S +A+ D Y+G+
Sbjct: 11 DPSILVK-FCSAGIAASIAEAATIPIDTAKVRLQIQGESAVMASIAQGVRTTHDAHYRGM 69
Query: 366 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFX 545
+ V + K +G+ + ++G + R ++ D+ K ++ G D +
Sbjct: 70 LGTMVTLFKTEGMKTMYKGLIPGIHRQLCFASIRIGLYDQVKAMY-GDTDVQNP---KIL 125
Query: 546 XXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLY 725
++ P + + R AD G R SG ++I +++G+ GL+
Sbjct: 126 KKIAASITTGIMAVSVAQPTEVVKIRFQADAG-----RYTSGTMGTYAEIARNEGMKGLW 180
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 45.6 bits (103), Expect = 4e-05
Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 1/166 (0%)
Frame = +3
Query: 231 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 410
++ +AG + TA P++ +K+ LQ + G +D R K +G+
Sbjct: 71 RNLIAGSVGGVTGVTAGQPLDTIKVRLQASFGA----------GPLDMLARTVKTEGVRG 120
Query: 411 FWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLC 590
++G A V+ P A++F K++ L +K+ +Y+ +
Sbjct: 121 LYKGMLAPVLVAAPVTAVSFYSLSIGKRLQLSDPNKEPTMVQYYNAGVFCG-----VCVS 175
Query: 591 FVYPLDFARTRLAADVGKGDGQR-EFSGLGNCISKIFKSDGLIGLY 725
F+Y R + V K G + + GLG+C+ +++++ GL G++
Sbjct: 176 FIYA-PTERVKCLLQVQKESGTKARYQGLGDCLLQVYRTGGLRGVF 220
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 44.4 bits (100), Expect = 1e-04
Identities = 35/121 (28%), Positives = 52/121 (42%)
Frame = +3
Query: 363 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYF 542
++ AF I + +GLL++++GN A ++R FP A+ F + Y +V Q
Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKVL--------QTSSPA 64
Query: 543 XXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGL 722
T+ YPLD R+RLA V + G + CIS K G L
Sbjct: 65 INKLVAGSLAGMTACACTYPLDMVRSRLAFQVAQDQGYTTITQTIRCIS--VKEGGPKAL 122
Query: 723 Y 725
Y
Sbjct: 123 Y 123
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +3
Query: 237 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL-LSF 413
F+ GG++ AVS+T P++ V+ +Q ++ + +Y ++ V + K+ G+
Sbjct: 176 FVCGGVAGAVSQTIAYPLDVVRRRMQ---LAGAVPDGHKYNTCINTLVNVYKDDGIRRGL 232
Query: 414 WRGNFANVIRYFPTQALNFAFKDKYKQ 494
+RG N +R P A+ F + KQ
Sbjct: 233 YRGLSINYLRVCPQVAIMFGVYEVTKQ 259
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 44.0 bits (99), Expect = 1e-04
Identities = 38/165 (23%), Positives = 67/165 (40%)
Frame = +3
Query: 231 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 410
K+ +AG + A + P++ +K+ LQ + K YK D F +I + +G+
Sbjct: 40 KNSIAGSAAGAAANLVGFPLDTIKVRLQAMPLPKP-GEPWMYKNSFDCFFKIIRNEGVYY 98
Query: 411 FWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLC 590
+RG ++ P + F+ K L V K + R TS
Sbjct: 99 LFRGVTVPILNSIPNTTVLFSCVSFVKSYKLP-VSKDPELLRSLAAGMIAGVA---TSFV 154
Query: 591 FVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLY 725
PLD R + + K G + G +C+ +I++ G+ G+Y
Sbjct: 155 LT-PLD--RVKCILQIEKAFGGSSYGGPVDCLRRIYREAGVRGVY 196
Score = 36.3 bits (80), Expect = 0.025
Identities = 24/88 (27%), Positives = 40/88 (45%)
Frame = +3
Query: 189 SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIV 368
S K+ DP + AG I+ + + P++RVK +LQ++ + Y G V
Sbjct: 126 SYKLPVSKDP-ELLRSLAAGMIAGVATSFVLTPLDRVKCILQIE----KAFGGSSYGGPV 180
Query: 369 DAFVRIPKEQGLLSFWRGNFANVIRYFP 452
D RI +E G+ ++G +R P
Sbjct: 181 DCLRRIYREAGVRGVYKGISVTAMRDIP 208
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 43.6 bits (98), Expect = 2e-04
Identities = 39/165 (23%), Positives = 67/165 (40%)
Frame = +3
Query: 231 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 410
K LAGGI+ + P E VK LQ+ + AA Y+G +D + K G+L
Sbjct: 42 KAILAGGIAGGLEICCTFPTEYVKTQLQLD----EKAAKPIYRGPIDCVKKTVKGHGVLG 97
Query: 411 FWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLC 590
+RG + + P ++ FA + K K TQ F ++
Sbjct: 98 LYRGLSSLLYGSVPKASVRFAVFEYLKNKMADENGKLTQ----FQTLASGLGAGVSEAVV 153
Query: 591 FVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLY 725
V P++ + + D + ++ G + + I K++G G+Y
Sbjct: 154 VVCPMETIKVKFIHD--QTQPNPKYKGFFSGVRTILKTEGFFGVY 196
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/83 (27%), Positives = 41/83 (49%)
Frame = +3
Query: 252 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 431
I A TAV PI+ VK +Q Q + A++ YK +D F ++ + +G + +RG
Sbjct: 922 IKKATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLP 979
Query: 432 NVIRYFPTQALNFAFKDKYKQVF 500
++ P +A+ D + +F
Sbjct: 980 QLLGVSPEKAIKLTTNDFVRGIF 1002
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 579 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLY 725
T VYP+D +TR+ + ++ + +C K+ +++G IGLY
Sbjct: 926 TGATAVYPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLY 974
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +3
Query: 195 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ---HVSKQIAADQRYKGI 365
K+ N P + G +S +SK + P + +K +QVQ + Q+Y G+
Sbjct: 19 KVHNPYKPADVIESLTCGALSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGV 78
Query: 366 VDAFVRIPKEQGLLSFWRG 422
D F I KE+G + ++G
Sbjct: 79 KDCFRTILKEEGAMGLFKG 97
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/75 (29%), Positives = 35/75 (46%)
Frame = +3
Query: 237 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 416
F +GGI+ +S P++ VK Q + +Y G D +I G+ +F
Sbjct: 361 FFSGGIAGTLSWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFG 420
Query: 417 RGNFANVIRYFPTQA 461
+G A ++R FPT A
Sbjct: 421 QGLLATILRGFPTNA 435
Score = 38.7 bits (86), Expect = 0.005
Identities = 40/173 (23%), Positives = 69/173 (39%), Gaps = 15/173 (8%)
Frame = +3
Query: 240 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIA----------ADQRYKGIVDAFVRIP 389
++G I+ V P+E K +QVQ +++ Y G +D ++
Sbjct: 249 ISGAIAGGVQSIVCCPMELAKTRVQVQGQGQKLVHVFFLTNTETKQMAYTGSLDCLKKVF 308
Query: 390 KEQGLLSFWRGNFANVIRYFPTQALNF-AFKDKYKQVFLGG--VDKKTQFWRYFXXXXXX 560
+GL +RG R P AL F +F+ + + G VD + +F
Sbjct: 309 HSEGLRGCFRGMAITTTRDIPAFALYFGSFQYVCELLTPKGEHVDNLSPIRLFFSGGIAG 368
Query: 561 XXXXXXTSLCFVYPLDFARTRLAAD--VGKGDGQREFSGLGNCISKIFKSDGL 713
T YP+D ++ AD G Q +++G +C+ KI+ S G+
Sbjct: 369 TLSWILT-----YPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGV 416
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 41.1 bits (92), Expect = 9e-04
Identities = 21/81 (25%), Positives = 43/81 (53%)
Frame = +3
Query: 228 AKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLL 407
A++ +AG +S + A P++ +K+ LQ + K +KG +D F++ + +GL
Sbjct: 21 ARNLIAGSVSGMLGCAAGQPLDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLR 79
Query: 408 SFWRGNFANVIRYFPTQALNF 470
++G + ++ P+ AL F
Sbjct: 80 GLYKGMLSPLLMATPSTALTF 100
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 41.1 bits (92), Expect = 9e-04
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = +3
Query: 240 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 419
L G S ++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++
Sbjct: 426 LVGTSSTLIAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYK 482
Query: 420 G 422
G
Sbjct: 483 G 483
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = +3
Query: 351 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 494
+Y G+ +I +++GL +++GN N++R P A+ FA +++K+
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
Score = 31.9 bits (69), Expect = 0.54
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 597 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLY 725
YPLD R R+ + +G+G ++S + I +S+G IGL+
Sbjct: 700 YPLDVVRRRMQME--RGEGMFKYSSTWDGFKVIVRSEGFIGLF 740
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +3
Query: 336 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 500
I ++Y G+++AF RI +++G+ +F+RG +I P ++F + K+ F
Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYETCKKAF 73
Score = 31.1 bits (67), Expect = 0.95
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 579 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLY 725
T+ YPLD R RLA +++++GL N ++I++ +G+ Y
Sbjct: 2 TAALLTYPLDMVRARLAI-----TQKKKYTGLINAFTRIYRDEGMRTFY 45
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 38.7 bits (86), Expect = 0.005
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Frame = +3
Query: 240 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 419
LAG + A+ PIE +K LQ+ Y+G++ + KE+G+ +F+R
Sbjct: 2 LAGACATVFHDGAMNPIEVIKQRLQMY--------GSPYRGVIHCATSVFKEEGIRAFYR 53
Query: 420 GNFANVIRYFPTQALNFAFKDKYKQVF--LGGVDKKT 524
+ P Q L+F + ++ LGG D KT
Sbjct: 54 SYTTQLSMNIPFQTLHFTVYEYARKALNPLGGYDPKT 90
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 366 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFW 533
+DA ++IP+ +GL S WRG ++ P + F D+ K + G + +T W
Sbjct: 64 IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK-ISYGFKNNETNLW 118
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 37.5 bits (83), Expect = 0.011
Identities = 32/145 (22%), Positives = 58/145 (40%), Gaps = 3/145 (2%)
Frame = +3
Query: 285 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 464
PI+ K +QVQ + Q A +Y+ + A I + G+ ++G A ++R P
Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANGF 280
Query: 465 NFAFKDKYKQVFL---GGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAAD 635
F F + K + G V+ + T YP D ++ + AD
Sbjct: 281 FFGFYEFTKNLLTPEGGTVNDVSPLGLLTSGAMGGFFYWFLT-----YPTDLVKSSMMAD 335
Query: 636 VGKGDGQREFSGLGNCISKIFKSDG 710
R++ G +C K++ ++G
Sbjct: 336 -HSDKALRKYHGYIDCARKLYTNEG 359
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 37.5 bits (83), Expect = 0.011
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 1/162 (0%)
Frame = +3
Query: 243 AGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 422
+ I+A ++ T P+ +K LQ+++ A+ +K + A+ K +G+ +F+RG
Sbjct: 840 SSAIAAFINHTVTNPLWFIKTRLQLENQGGTRAS--AFKIVSMAY----KAEGIRAFYRG 893
Query: 423 NFANVIRYFPTQALNFAFKDKYKQVFLG-GVDKKTQFWRYFXXXXXXXXXXXXTSLCFVY 599
A+ + T ++F ++ K L + F TSLC Y
Sbjct: 894 LTASYVGISET-VVHFTIYERLKAELLKLHYKSRRDFHVVECMLAAGISKCIATSLC--Y 950
Query: 600 PLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLY 725
P + ARTRL + G++++ + + + +G GLY
Sbjct: 951 PHEVARTRLRQQESEFLGRQKYRSFFQTLGTVLREEGWRGLY 992
Score = 32.3 bits (70), Expect = 0.41
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = +3
Query: 240 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 419
LA GIS ++ + P E + L+ Q + Q+Y+ + +E+G +
Sbjct: 936 LAAGISKCIATSLCYPHEVARTRLRQQE--SEFLGRQKYRSFFQTLGTVLREEGWRGLYG 993
Query: 420 GNFANVIRYFPTQALNF 470
G +VIR P A+ F
Sbjct: 994 GLGTHVIRQVPNTAIMF 1010
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 37.1 bits (82), Expect = 0.014
Identities = 32/136 (23%), Positives = 60/136 (44%)
Frame = +3
Query: 237 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 416
F++G + V+ + P++ V+ L VQ +S + ++ Y GIV A RI E+G+ +
Sbjct: 32 FVSGATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGIRGLY 89
Query: 417 RGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFV 596
+G +++ P + + D K L +D + F + V
Sbjct: 90 KGLVPSLVSIAPFLGVQQSVYDIMK---LRALD--SAFAANSGTFLVCGAIAGMIAQTVV 144
Query: 597 YPLDFARTRLAADVGK 644
+PLD R ++ D G+
Sbjct: 145 HPLDVVRRQMQVDRGR 160
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 35.5 bits (78), Expect = 0.044
Identities = 33/132 (25%), Positives = 54/132 (40%)
Frame = +3
Query: 231 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 410
+ FLAGG ++ V +T P++ + L +Q Q + KG + G
Sbjct: 107 RGFLAGGCASIVGQTITVPVDIISQKLMIQ---GQGDRKVKLKGARILIRETFHQHGPGG 163
Query: 411 FWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLC 590
F++G FA+++ Y P+ A+ +A Y V +G + T+
Sbjct: 164 FYKGYFASLMTYAPSSAIWWASYGFYTGV-IGNL--SADGTHRLLVLGSSGVLAGVTAAT 220
Query: 591 FVYPLDFARTRL 626
PLD RTRL
Sbjct: 221 LTNPLDVIRTRL 232
Score = 28.3 bits (60), Expect = 6.7
Identities = 32/147 (21%), Positives = 53/147 (36%)
Frame = +3
Query: 285 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 464
P +K+ LQVQ + Y G +DAF ++ + +G+ ++G + F Q
Sbjct: 35 PANLIKIRLQVQRKTTL------YNGSLDAFTKVIRTEGVRGLYKGYLVSCAGLFAGQ-- 86
Query: 465 NFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGK 644
+ Y+ V KT + Y P+D +L G+
Sbjct: 87 --CYITTYEL-----VRSKTAQYNYTIRGFLAGGCASIVGQTITVPVDIISQKLMIQ-GQ 138
Query: 645 GDGQREFSGLGNCISKIFKSDGLIGLY 725
GD + + G I + F G G Y
Sbjct: 139 GDRKVKLKGARILIRETFHQHGPGGFY 165
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 34.7 bits (76), Expect = 0.077
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +3
Query: 243 AGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 422
AG ++ + AV P++ +K LQ+ + + + Y GI+D +I +GL +F++G
Sbjct: 211 AGCLAGMTASVAVNPLDVIKTRLQLLNRPQ---GEPNYNGIIDCAKKIYSNEGLAAFYKG 267
Query: 423 NFANVIRYFP 452
+I P
Sbjct: 268 AVPRMIVIAP 277
Score = 34.7 bits (76), Expect = 0.077
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +3
Query: 579 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLY 725
T+ V PLD +TRL + + G+ ++G+ +C KI+ ++GL Y
Sbjct: 218 TASVAVNPLDVIKTRLQL-LNRPQGEPNYNGIIDCAKKIYSNEGLAAFY 265
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +3
Query: 384 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 497
+P+E L W G F++VI F A+N AF+++YK++
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKI 309
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 32.7 bits (71), Expect = 0.31
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +3
Query: 243 AGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYK-GIVDAFVRIPKEQGLLSFWR 419
AG +A + P E +K LQ QH + I+ K G++D ++I + G +R
Sbjct: 112 AGSGAAFFMSFVLCPAELIKCRLQAQHQTNLISGMAGPKSGVIDVTMQIIRNDGFQGLFR 171
Query: 420 GNFANVIRYFP 452
G A R P
Sbjct: 172 GMTATWAREVP 182
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 32.3 bits (70), Expect = 0.41
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +3
Query: 384 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 497
+P+E +L W G ++VI F A+N F+D+YK++
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKKL 176
>SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061)
Length = 114
Score = 31.9 bits (69), Expect = 0.54
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +3
Query: 249 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 419
G+S +KT AP+ER+K+L Q Q+ + + A I K++GL +++
Sbjct: 63 GLSTCCAKTTTAPLERLKILFQAQN------KHYKNMSVFGALKAIYKKEGLQGYYK 113
>SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35)
Length = 965
Score = 31.5 bits (68), Expect = 0.72
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -1
Query: 259 AEIPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 125
A++PP R +A + + FD+ + I TR RGG ++ WG+
Sbjct: 538 ADLPPDRTEVAPSFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 581
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +3
Query: 267 SKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 425
S+ VA ER +L+ Q Q +D RY+G +D+F + +G L +RG+
Sbjct: 278 SRQTVACPERCGVLMASQGKRGQYMSDARYRGHLDSFRGDARYRGHLDSFRGD 330
>SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17)
Length = 187
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +3
Query: 231 KDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLL 407
K+F+ G +A+ + P+E VK +Q+Q + + Y+ + A I K +G+L
Sbjct: 6 KEFVLGATAASGACFFTNPLEVVKTRMQLQGELKSRGTYSVYYRNVFHASYTIAKYEGIL 65
Query: 408 SFWRGNFANVI 440
+ +G F +I
Sbjct: 66 AMQKGLFPALI 76
>SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1616
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -1
Query: 259 AEIPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 125
A++PP R +A + FD+ + I TR RGG ++ WG+
Sbjct: 1265 ADLPPDRTEVAPPFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 1308
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 579 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSD-GLIGLY 725
T+ YPLD R+RLA V + + G+ + +IF ++ G++ LY
Sbjct: 11 TACSCTYPLDIVRSRLAFQVA---DEHTYCGICQTVKQIFMTEGGMVALY 57
>SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 305 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 406
A+ S RQQ R RP +GY +R R YP+ SP
Sbjct: 83 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 117
>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 305 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 406
A+ S RQQ R RP +GY +R R YP+ SP
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 217
>SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 404
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 305 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 406
A+ S RQQ R RP +GY +R R YP+ SP
Sbjct: 261 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 295
>SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)
Length = 550
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 305 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 406
A+ S RQQ R RP GY +R R YP+ SP
Sbjct: 84 ASGSNQRQQQARGRPQASGYNQRSRRGYPRARASP 118
>SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21)
Length = 198
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 243 AGGISAAVSKTAVAPIERVKLLLQ 314
AGG++ S+T AP+E++K++ Q
Sbjct: 175 AGGVAGVASRTLTAPLEKMKIIAQ 198
>SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039)
Length = 54
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +3
Query: 360 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 497
G+V + G +RGN A ++R P ++ F ++YK++
Sbjct: 1 GVVHVLTQTYTTNGFTGLFRGNSATMMRVVPYASIQFTSHEQYKKL 46
>SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -2
Query: 636 HRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTAS-SC 514
+ RD RS+ +R++ RWL R R+P S+ R++S SC
Sbjct: 6 NNNRDN-TRSQVRSRNSNRWLLRQQRQPQRHLSHKRSSSNSC 46
>SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7)
Length = 272
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 673 RPENSRWPSPLPTSAARRVRAKSRGYTK 590
RP +SR S P+SA+RR ++SRG +
Sbjct: 221 RPSSSRPSSARPSSASRRASSRSRGLAR 248
>SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 313
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/80 (22%), Positives = 32/80 (40%)
Frame = +3
Query: 231 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 410
K+F AGG P++ +K+ LQ K + G D ++ + +G
Sbjct: 28 KNFFAGGFGGVCCIATGHPLDTIKVRLQTMPRPKP-GEKPMFTGTFDCAMKTIRNEGFFG 86
Query: 411 FWRGNFANVIRYFPTQALNF 470
++G A + P A+ F
Sbjct: 87 LYKGMAAPITGVTPIFAICF 106
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 597 YPLDFARTRLAADVGKGDGQRE-FSGLGNCISKIFKSDGLIGLY 725
+PLD + RL G++ F+G +C K +++G GLY
Sbjct: 45 HPLDTIKVRLQTMPRPKPGEKPMFTGTFDCAMKTIRNEGFFGLY 88
>SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 406
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 305 AAPSTARQQADRRRPALQGY-RRCLRPYPQGAGSP 406
A+ S RQQ R RP +GY +R R YP+ +P
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARATP 217
>SB_3524| Best HMM Match : ETS_PEA3_N (HMM E-Value=5.8)
Length = 357
Score = 28.7 bits (61), Expect = 5.1
Identities = 32/95 (33%), Positives = 35/95 (36%)
Frame = -2
Query: 621 GYVRSRGGTRSTERWLRRHHRRPDYQRSNARTASSCQHRRGTPACTCP*RRS*APGSGST 442
G + S G + RW R H RP R R S P C P + G T
Sbjct: 235 GLLVSLIGLYTRRRW--RPHSRPRIDRLPFRRQSFALPDNANPGCY-PWSKQIFRHEGPT 291
Query: 441 **RWRSYHARMKGDPAPWGYGRRHRRYPCNAGRRR 337
R S H R GD A Y HRR N RRR
Sbjct: 292 HIR-TSVH-RNVGDAAEQDYKDHHRRRSHNRPRRR 324
>SB_45236| Best HMM Match : PRP38 (HMM E-Value=0)
Length = 381
Score = 28.7 bits (61), Expect = 5.1
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = -2
Query: 639 RHRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTASSCQHRRGTPACT 484
R R RD RSR R + RR R +RS R S +HR + +CT
Sbjct: 321 RSRSRDRR-RSRSRERRRDDRKRRSRERSPKRRSREREESRSRHRGRSNSCT 371
>SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 387 PKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 503
P+E L W G ++VI F +N F++++K+++L
Sbjct: 815 PRELYLFYSWLGALSSVINPFIYGVMNPMFREEFKRIYL 853
>SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)
Length = 343
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 384 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 500
+P+E L + G ++VI F A+N F+++YK+VF
Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVF 301
>SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)
Length = 368
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 384 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 497
+P+E +L + G ++VI F A+N FK++YK++
Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKI 304
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -2
Query: 633 RRRDGYVRSRGGTRSTERWLRRHHR-RPDYQRSNARTASSCQHRRGTP 493
R+ + R +GG R+T+ ++H R +PD +R+ R R+GTP
Sbjct: 865 RKVEERARHKGGNRATQEREKKHRRNQPDKRRTQMRIP-----RKGTP 907
>SB_26302| Best HMM Match : Reg_prop (HMM E-Value=3.1e-06)
Length = 117
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = +3
Query: 360 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKY--KQVFLGGVDKKTQFW 533
G++ + V ++ + W G + +Y N+ +D V G+DKK Q W
Sbjct: 17 GLIQSQVTAIEQDKMGHLWMGTIGGLAKYDGHTFTNYTIRDGLLNNSVTALGIDKKNQIW 76
>SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 792
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +2
Query: 32 ISKKAHTYPLCSRDYEITPNLLFKNQELV----FRDPPSACAATPTSTYSPS 175
++ ++ Y C + E +P + + ++D SAC A P TY PS
Sbjct: 106 LTDESELYGYCQSNGEWSPAMYTSRHRCMCHAGYQDTVSACTACPRGTYKPS 157
>SB_18153| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=5)
Length = 237
Score = 27.9 bits (59), Expect = 8.9
Identities = 22/112 (19%), Positives = 49/112 (43%)
Frame = +3
Query: 165 IHLVKIT*SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAA 344
I +K S + ++A V+ + + + +K+A +K+L + + Q+
Sbjct: 7 IDSLKFEISESIKDVAKQVSNLSNKVTSEFKSVKNKSASTAETILKILGDLGEIKDQLLK 66
Query: 345 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 500
+ + + D+ R K G+ + R N ++ ++Y PT N + K +F
Sbjct: 67 TE--ETVADS-TRYKKSGGIAVYIRENISSGVKYIPTDNENVLWVKVCKNIF 115
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,245,279
Number of Sequences: 59808
Number of extensions: 445564
Number of successful extensions: 1506
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 1306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1483
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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