Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0223
(348 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1209 + 34948899-34948938,34949086-34949222,34949854-349499... 102 9e-23
11_01_0688 - 5667539-5667655,5667792-5667953,5668084-5668179,566... 95 1e-20
11_01_0689 - 5678227-5678343,5678475-5678636,5678751-5678846,567... 92 9e-20
11_01_0686 - 5635207-5635323,5635483-5635644,5635727-5635822,563... 89 1e-18
03_01_0635 - 4660692-4660737,4660783-4660829,4661371-4661507,466... 69 1e-12
03_01_0636 - 4664472-4664588,4664695-4664856,4664984-4665061,466... 64 4e-11
10_01_0344 - 3777610-3777758,3777870-3777959,3778950-3779025,377... 60 4e-10
02_05_0070 - 25584690-25584806,25585151-25585312,25585396-255854... 60 6e-10
08_01_0065 + 452383-452629,452733-452868,453049-453118,453237-45... 57 3e-09
03_01_0012 - 101584-101898,102274-102531,102932-103474 41 3e-04
10_08_0923 + 21597593-21597629,21598089-21598135,21598253-215983... 36 0.012
09_04_0028 - 13928542-13929538,13929736-13929818 33 0.081
04_04_1128 + 31103582-31103709,31105231-31105344,31105906-311064... 33 0.081
09_04_0029 - 13932414-13933416,13933821-13933903 31 0.19
09_04_0030 + 13940168-13940250,13940703-13941714 31 0.25
02_05_1140 + 34386042-34386302,34386738-34386917,34386999-343870... 31 0.33
09_04_0031 + 13946692-13946774,13947007-13948012 30 0.43
07_03_1757 + 29250163-29250349,29250612-29250813,29250898-292510... 30 0.43
10_08_0101 - 14789994-14790205,14790290-14790957,14791232-147913... 29 0.76
03_02_0747 + 10888358-10888481,10888529-10888609,10889011-108892... 29 1.3
03_02_0208 + 6420576-6420658,6421640-6421753,6421848-6422379,642... 28 1.8
08_02_0538 - 18321101-18321128,18321767-18322587 28 2.3
08_01_1024 - 10349061-10349200,10349373-10350040,10350478-103505... 28 2.3
08_02_1462 + 27308792-27308924,27309711-27309778,27309854-273101... 27 3.1
12_02_0002 + 12119832-12120003,12120620-12120866,12121011-121210... 27 4.0
08_02_1352 - 26325081-26325150,26325315-26325391,26326799-263269... 27 4.0
04_03_0375 - 15085537-15085827,15086742-15087101,15087127-15087684 27 4.0
08_01_1059 - 10775143-10776063 27 5.3
07_01_0028 + 217214-218239 27 5.3
03_06_0116 + 31773295-31773603,31773800-31773946,31774080-317741... 27 5.3
08_01_0208 + 1662101-1662223,1663130-1663243,1663327-1663468,166... 26 7.1
05_04_0028 + 17302359-17302445,17303887-17303952,17305415-173054... 26 7.1
02_01_0023 + 146841-147002,147962-148036,148181-148234,148284-14... 26 7.1
09_04_0545 - 18457169-18457399,18457733-18457915,18458012-184582... 26 9.3
06_03_0431 + 20713186-20713977 26 9.3
05_01_0493 + 4113869-4116728,4116859-4117370 26 9.3
04_02_0018 - 8595479-8595678,8595782-8595935,8596396-8597032,859... 26 9.3
01_07_0291 + 42555233-42555444,42556515-42556550,42556652-425567... 26 9.3
01_06_0068 + 26163623-26163740,26163749-26165274 26 9.3
>02_05_1209 +
34948899-34948938,34949086-34949222,34949854-34949900,
34949990-34950315,34950640-34950722,34950801-34950876,
34951499-34951656,34951979-34952140,34952235-34952351
Length = 381
Score = 102 bits (244), Expect = 9e-23
Identities = 44/66 (66%), Positives = 55/66 (83%)
Frame = +1
Query: 103 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEG 282
ST G+VI C AAVAWEA +P++IE+++V PP+AGEVRVKI T +CHTD YT SGKDPEG
Sbjct: 4 STQGQVITCKAAVAWEANRPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEG 63
Query: 283 VFPVVL 300
+FP +L
Sbjct: 64 LFPCIL 69
>11_01_0688 -
5667539-5667655,5667792-5667953,5668084-5668179,
5668278-5668339,5668434-5668509,5668612-5668694,
5668807-5669132,5669741-5669787,5669900-5670036,
5670135-5670168
Length = 379
Score = 95.1 bits (226), Expect = 1e-20
Identities = 45/67 (67%), Positives = 50/67 (74%)
Frame = +1
Query: 100 MSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPE 279
M+T GKVIKC AAVAWEAGKPLSIEE+EV PP+A EVRVKI T +CHTD Y K
Sbjct: 1 MATAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWEAKGQT 60
Query: 280 GVFPVVL 300
VFP +L
Sbjct: 61 PVFPRIL 67
>11_01_0689 -
5678227-5678343,5678475-5678636,5678751-5678846,
5679345-5679406,5679648-5679723,5679847-5679929,
5680525-5680853,5681402-5681448,5681707-5681843,
5682093-5682126
Length = 380
Score = 92.3 bits (219), Expect = 9e-20
Identities = 43/64 (67%), Positives = 48/64 (75%)
Frame = +1
Query: 100 MSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPE 279
M+T GKVIKC AAVAWEAGKPLSIEE+EV PP+A EVR+KI T +CHTD Y K
Sbjct: 1 MATAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRLKILYTALCHTDVYFWEAKGQT 60
Query: 280 GVFP 291
VFP
Sbjct: 61 PVFP 64
>11_01_0686 -
5635207-5635323,5635483-5635644,5635727-5635822,
5635903-5635964,5636046-5636121,5636201-5636283,
5636369-5636694,5637524-5637570,5637668-5637804,
5638064-5638097
Length = 379
Score = 88.6 bits (210), Expect = 1e-18
Identities = 42/64 (65%), Positives = 46/64 (71%)
Frame = +1
Query: 100 MSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPE 279
M+T GKVIKC AAVAWEA KPL IEE+EV PP+A EVRVKI T +CHTD Y K
Sbjct: 1 MATAGKVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQT 60
Query: 280 GVFP 291
VFP
Sbjct: 61 PVFP 64
>03_01_0635 -
4660692-4660737,4660783-4660829,4661371-4661507,
4661661-4661697
Length = 88
Score = 68.9 bits (161), Expect = 1e-12
Identities = 32/57 (56%), Positives = 40/57 (70%)
Frame = +1
Query: 121 IKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFP 291
I+C AAV AG+PL++EEI VDPPKA EVR+KI T +CH+D +D GVFP
Sbjct: 9 IRCKAAVCRAAGEPLAVEEIVVDPPKAHEVRIKIVCTSLCHSDVTFWRMQDFPGVFP 65
>03_01_0636 -
4664472-4664588,4664695-4664856,4664984-4665061,
4665157-4665221,4665476-4665558,4666052-4666414,
4666512-4666555,4666632-4666765,4666881-4666917
Length = 360
Score = 63.7 bits (148), Expect = 4e-11
Identities = 32/62 (51%), Positives = 39/62 (62%)
Frame = +1
Query: 115 KVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPV 294
K I+C AAV A +PL +EEI VDPPKA E+R+KI T +CHTD DP FP
Sbjct: 7 KPIRCKAAVCRAASEPLIVEEIVVDPPKAYEIRIKIICTSLCHTDVTLWHKVDP--AFPR 64
Query: 295 VL 300
+L
Sbjct: 65 IL 66
>10_01_0344 -
3777610-3777758,3777870-3777959,3778950-3779025,
3779206-3779288,3780456-3780799,3782064-3782113,
3782406-3782542,3782692-3782776
Length = 337
Score = 60.5 bits (140), Expect = 4e-10
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +1
Query: 88 SSAVMSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSG 267
+ A T GK IKC AAVA G+ L +EE+EV PP EVR+K+ T +CHTD G
Sbjct: 14 NGAGADTKGKPIKCKAAVAHGPGEALVMEEVEVAPPARMEVRLKVLFTSICHTDLSAWKG 73
Query: 268 KDP-EGVFPVVL 300
++ + FP +L
Sbjct: 74 ENELQRKFPRIL 85
>02_05_0070 -
25584690-25584806,25585151-25585312,25585396-25585491,
25585894-25585955,25586035-25586110,25586195-25586277,
25586456-25586778,25586882-25586928,25587014-25587150,
25587250-25587322,25588159-25588251,25588543-25588632,
25588684-25588786,25588869-25588981,25589181-25589778,
25589888-25590065,25590277-25590296,25590713-25590882,
25591245-25591485,25592997-25593199
Length = 994
Score = 59.7 bits (138), Expect = 6e-10
Identities = 27/66 (40%), Positives = 38/66 (57%)
Frame = +1
Query: 94 AVMSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKD 273
A S+ I C AAVAW G+ L +EE+EV PP+A E+RVK+ +T +C +D
Sbjct: 615 AAASSPAAAITCRAAVAWAPGQALVMEEVEVAPPEAMEIRVKVVSTSICRSDVTQWQSTA 674
Query: 274 PEGVFP 291
+FP
Sbjct: 675 QTDLFP 680
>08_01_0065 +
452383-452629,452733-452868,453049-453118,453237-453330,
453426-453639,453756-453897,454076-454246,454586-454780
Length = 422
Score = 57.2 bits (132), Expect = 3e-09
Identities = 23/47 (48%), Positives = 33/47 (70%)
Frame = +1
Query: 136 AVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDP 276
AV WE G+PL++E+ + PKAGE+ +K A GVCH+D + L G+ P
Sbjct: 53 AVFWEPGRPLTLEDFRMPRPKAGELLIKTKACGVCHSDLHVLKGELP 99
>03_01_0012 - 101584-101898,102274-102531,102932-103474
Length = 371
Score = 40.7 bits (91), Expect = 3e-04
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +1
Query: 118 VIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSG 267
V+KC+ + L E++EV PK GE+R+K TA GV D Y G
Sbjct: 46 VVKCIRVHELGGPEVLRWEQVEVGEPKEGEIRIKNTAIGVNFIDVYYRQG 95
>10_08_0923 +
21597593-21597629,21598089-21598135,21598253-21598391,
21598449-21598562,21599206-21599432,21599578-21599835,
21600014-21600304,21600766-21600830,21601116-21601299,
21601857-21601964
Length = 489
Score = 35.5 bits (78), Expect = 0.012
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 163 LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPE 279
L+ EE+E+ P GE+R+K A GV + D Y +G E
Sbjct: 30 LTWEEVEIGEPSEGEIRIKNKAIGVNYVDIYYRTGLHQE 68
>09_04_0028 - 13928542-13929538,13929736-13929818
Length = 359
Score = 32.7 bits (71), Expect = 0.081
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 205 EVRVKITATGVCHTDAYTLSGKDPEGVFPVV 297
+V +K+ G+CHTD +T+ + ++PVV
Sbjct: 34 DVTIKVLYCGICHTDLHTIKNEWGNAMYPVV 64
>04_04_1128 +
31103582-31103709,31105231-31105344,31105906-31106446,
31106911-31107003,31107041-31107194,31107296-31107498
Length = 410
Score = 32.7 bits (71), Expect = 0.081
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +1
Query: 178 IEVDPPKAGE--VRVKITATGVCHTDAYTLSGKDPEGVFPVV 297
I + K G+ V +K+ G+CH+D +T+ + V+PVV
Sbjct: 38 IRISRRKTGDDDVAIKVLYCGICHSDLHTIKNEWRNAVYPVV 79
>09_04_0029 - 13932414-13933416,13933821-13933903
Length = 361
Score = 31.5 bits (68), Expect = 0.19
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +1
Query: 133 AAVAWEAGKP---LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPVV 297
AAV W A LS K +V +K+ G+CHTD + + ++PVV
Sbjct: 7 AAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHVVKNDWGNAMYPVV 64
>09_04_0030 + 13940168-13940250,13940703-13941714
Length = 364
Score = 31.1 bits (67), Expect = 0.25
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +1
Query: 133 AAVAWEAGKP---LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPVV 297
AAV W A LS K +V +K+ G+CHTD + + ++PVV
Sbjct: 7 AAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHIVKNDWGNAMYPVV 64
>02_05_1140 +
34386042-34386302,34386738-34386917,34386999-34387080,
34387180-34387287,34387442-34387630,34387814-34388010
Length = 338
Score = 30.7 bits (66), Expect = 0.33
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +1
Query: 133 AAVAWEAGKPLSIEEIEVD----PPKAGEVRVKITATGVCHTDAYTLSGKDP 276
A V AG P +EE +V PP GEV V ++A GV D G+ P
Sbjct: 3 AVVIARAGGPEVLEERDVGEGLPPPGEGEVLVGVSAAGVNRADTVQRQGRYP 54
>09_04_0031 + 13946692-13946774,13947007-13948012
Length = 362
Score = 30.3 bits (65), Expect = 0.43
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +1
Query: 205 EVRVKITATGVCHTDAYTLSGKDPEGVFPVV 297
+V +K+ G+CHTD + + + ++PVV
Sbjct: 34 DVTIKVLYCGICHTDLHIIKNEWGNAMYPVV 64
>07_03_1757 +
29250163-29250349,29250612-29250813,29250898-29251008,
29251112-29251160,29251247-29251353,29251439-29251942,
29252486-29252614,29252865-29253161,29253274-29253720,
29253828-29253893,29254109-29254169,29254314-29254463,
29254555-29254689,29254791-29254818,29255430-29255479
Length = 840
Score = 30.3 bits (65), Expect = 0.43
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 55 TIISTFCDWQLSSAVMSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATG 234
T I CD L+ + T G V K ++W P ++ +E G+ V+++
Sbjct: 347 TFIREVCDLPLAEDIPITSGSVRKGKRLISWRPDMPSTLYWVEAQ--DGGDANVEVSPRD 404
Query: 235 VCHTD-AYTLSGKDPE 279
+ + + A L+G+ P+
Sbjct: 405 IVYMELADPLNGEKPQ 420
>10_08_0101 -
14789994-14790205,14790290-14790957,14791232-14791345,
14794826-14794932
Length = 366
Score = 29.5 bits (63), Expect = 0.76
Identities = 15/69 (21%), Positives = 32/69 (46%)
Frame = +1
Query: 91 SAVMSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGK 270
+A + G+ + + A ++ LS I +V +KI G+CH+D + + +
Sbjct: 4 TAASAAAGEEQQAVGLAARDSSGHLSPFAISRRSTGDDDVAIKILFCGICHSDLHCIKNE 63
Query: 271 DPEGVFPVV 297
++P+V
Sbjct: 64 WKHSIYPLV 72
>03_02_0747 +
10888358-10888481,10888529-10888609,10889011-10889227,
10889350-10889460,10889615-10889660,10889744-10889853,
10889926-10890429,10891466-10891594,10891934-10892230,
10892322-10892680,10892968-10893016,10893124-10893184,
10893429-10893578,10893659-10893796,10894525-10894805,
10895005-10895050
Length = 900
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/74 (21%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +1
Query: 61 ISTFCDWQLSSAVMSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVC 240
I CD L+ + V K ++ W KP + +E G+ +V+++ +
Sbjct: 360 IRELCDLPLAEDIPIATSSVRKGKRSIYWRPDKPAMLYWVETQ--DGGDAKVEVSPRDIV 417
Query: 241 HTD-AYTLSGKDPE 279
+ + A ++G+ PE
Sbjct: 418 YMENAEPINGEQPE 431
>03_02_0208 +
6420576-6420658,6421640-6421753,6421848-6422379,
6422452-6422605,6422655-6422947
Length = 391
Score = 28.3 bits (60), Expect = 1.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 205 EVRVKITATGVCHTDAYTLSGKDPEGVFPVV 297
+V VKI G+CH+D T+ + +PVV
Sbjct: 34 DVVVKILFCGICHSDLSTIKNEWGNAKYPVV 64
>08_02_0538 - 18321101-18321128,18321767-18322587
Length = 282
Score = 27.9 bits (59), Expect = 2.3
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -2
Query: 275 GSFPESVYASVWQTPVAVILTRTSPAFGGSTSISSMDS 162
G F + SV Q P+ ILT+ +P+ + S SS+D+
Sbjct: 222 GQFDYAALVSVSQRPIRDILTKIAPSVIPTDSSSSLDT 259
>08_01_1024 -
10349061-10349200,10349373-10350040,10350478-10350591,
10351956-10352032
Length = 332
Score = 27.9 bits (59), Expect = 2.3
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +1
Query: 205 EVRVKITATGVCHTDAYTLSGKDPEGVFPVV 297
+V +KI G+CH+D +++ + +P+V
Sbjct: 32 DVVIKILYCGICHSDLHSIKNEWKNATYPLV 62
>08_02_1462 +
27308792-27308924,27309711-27309778,27309854-27310159,
27310168-27310839
Length = 392
Score = 27.5 bits (58), Expect = 3.1
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 142 AWEAGK-PLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTL 261
AW K L I ++ P +VRV++ A G+C +D + L
Sbjct: 26 AWLVAKNTLKIMPFKLPPVGPYDVRVRMKAVGICGSDVHYL 66
>12_02_0002 +
12119832-12120003,12120620-12120866,12121011-12121050,
12121584-12121676,12124850-12124928,12124973-12125019,
12126178-12126266,12126353-12126424,12126617-12126710,
12127167-12127206,12127321-12127445,12130472-12130615,
12131510-12131740
Length = 490
Score = 27.1 bits (57), Expect = 4.0
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +1
Query: 91 SAVMSTVGKVIKCLAAVAW----EAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYT 258
S + ++G+ + C+ A +AG I +IEVDP A E+ K+T +
Sbjct: 48 SPCVFSIGRAVACIEASPTAEYTDAGLQ-DIVQIEVDPAAAAEIDAKLTV--AVQIEVVV 104
Query: 259 LSGKDPEG 282
+ G D +G
Sbjct: 105 VVGGDDDG 112
>08_02_1352 -
26325081-26325150,26325315-26325391,26326799-26326956,
26327433-26327518,26327635-26328317
Length = 357
Score = 27.1 bits (57), Expect = 4.0
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -3
Query: 310 LHVPVLQETLPQDLFRRVYTRQYG 239
LH+ ++Q LPQ + V+ ++YG
Sbjct: 303 LHLAIIQAALPQSIASFVFAKEYG 326
>04_03_0375 - 15085537-15085827,15086742-15087101,15087127-15087684
Length = 402
Score = 27.1 bits (57), Expect = 4.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 194 GGSTSISSMDSGLPASHATAAKHLITLPTVDMT 96
GG S+ +GLP S A AA +P VD T
Sbjct: 129 GGDASVLGGGAGLPGSGALAAGVRAVVPDVDAT 161
>08_01_1059 - 10775143-10776063
Length = 306
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = -2
Query: 254 YASVWQTPVAVILTRTSPAFGGSTSISSMDSGLPASHATAAKH 126
+ S+W P A RT+P G ++ ++ + PA+ A H
Sbjct: 167 FRSLWPYPAAAGAARTTPFLGRGSASAAAAAAAPAAPFYGAVH 209
>07_01_0028 + 217214-218239
Length = 341
Score = 26.6 bits (56), Expect = 5.3
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = -3
Query: 298 VLQETLPQDLFRRVYTRQYGRLRWP*S*RALHRLLAGPLQSPRW---TAACL 152
V +PQ L R ++ Q R P + RLL +S RW TA CL
Sbjct: 73 VTNHGVPQALLRELHDAQVAVFRRPFQEKVTERLLGFSPESYRWGTPTAKCL 124
>03_06_0116 +
31773295-31773603,31773800-31773946,31774080-31774158,
31777558-31778180
Length = 385
Score = 26.6 bits (56), Expect = 5.3
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -2
Query: 242 WQ-TPVAVILTRTSPAFGGSTSISSMDSGLPASHATAA 132
W+ TPVA + T A GG S D GL A+ A AA
Sbjct: 328 WKPTPVAGMTFPTVEAAGGGFRHSGHDGGLAAAAAAAA 365
>08_01_0208 +
1662101-1662223,1663130-1663243,1663327-1663468,
1663496-1663610,1663936-1664077,1664216-1664313,
1664396-1664525,1664740-1664884,1665163-1665389
Length = 411
Score = 26.2 bits (55), Expect = 7.1
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -2
Query: 257 VYASVWQTPVAVILTRTSPAFGGSTSISSMDSGL 156
V A++ T + + + + SP FGGS+ S + G+
Sbjct: 16 VIAALVLTTLCIFILKQSPGFGGSSVFSRHEPGV 49
>05_04_0028 +
17302359-17302445,17303887-17303952,17305415-17305489,
17305638-17305737,17305819-17305865,17305937-17305994,
17306161-17306210,17306417-17306473,17306561-17306703,
17306793-17306834,17307083-17307124,17308239-17308272,
17308342-17308443,17310373-17310652,17311202-17311332,
17311676-17311773,17312525-17312717
Length = 534
Score = 26.2 bits (55), Expect = 7.1
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +2
Query: 140 SRGKQASRCPSRRLKWTRQKPVKCALRSRPPESAILTRIHSPEK 271
SR SR SR + +R + RSR P S +R HSP K
Sbjct: 200 SRSISRSRSRSRSISRSRSRSYS---RSRSPRSRSASRSHSPVK 240
>02_01_0023 +
146841-147002,147962-148036,148181-148234,148284-148388,
148736-148836,148937-148992,149284-149324,149427-149527,
149629-149724,149905-149969,150048-150119,150537-150772,
150874-150904,151020-151165,151264-151365,151469-151513,
151614-151780,151812-152214
Length = 685
Score = 26.2 bits (55), Expect = 7.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 76 DWQLSSAVMSTVGKVIKCLAAVAWEAGKPLSIEEIEV 186
DW S M VG+ C+A VA E G + I++
Sbjct: 461 DWFKDSKRMDNVGRQKGCVAQVAAEKGMHTFVANIQI 497
>09_04_0545 -
18457169-18457399,18457733-18457915,18458012-18458227,
18459050-18459610
Length = 396
Score = 25.8 bits (54), Expect = 9.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 325 PRFRRLHVPVLQETLPQDLFRRVYTRQYG 239
PR + H P+ LP++LF + R+YG
Sbjct: 55 PRDTQPHPPLPPPLLPEELFFAEFERRYG 83
>06_03_0431 + 20713186-20713977
Length = 263
Score = 25.8 bits (54), Expect = 9.3
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +2
Query: 101 CQQSV--K*LSAWPQSRGKQASRCPSRRLKW 187
C+ SV + + W +SRG++A+ C R +W
Sbjct: 191 CRNSVHGECFARWKRSRGRRAATCVVCRARW 221
>05_01_0493 + 4113869-4116728,4116859-4117370
Length = 1123
Score = 25.8 bits (54), Expect = 9.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 264 GECIRVSMADSGGRDLNAHFTG 199
G C R+ + D GG L+ H G
Sbjct: 579 GSCTRLQLLDVGGNSLSGHVPG 600
>04_02_0018 -
8595479-8595678,8595782-8595935,8596396-8597032,
8597126-8597217
Length = 360
Score = 25.8 bits (54), Expect = 9.3
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 205 EVRVKITATGVCHTDAYTLSGKDPEGVFPVV 297
+V +K+ G+CHTD + + ++PVV
Sbjct: 37 DVTIKVKYCGMCHTDLHFIHNDWGITMYPVV 67
>01_07_0291 +
42555233-42555444,42556515-42556550,42556652-42556796,
42556885-42556938,42557130-42557260,42557830-42558056,
42558670-42558846,42558928-42559076
Length = 376
Score = 25.8 bits (54), Expect = 9.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -2
Query: 116 LPTVDMTALDNCQSQNVEIIV 54
L +DMTA+ CQ N+ ++V
Sbjct: 310 LSVMDMTAITLCQENNIPVVV 330
>01_06_0068 + 26163623-26163740,26163749-26165274
Length = 547
Score = 25.8 bits (54), Expect = 9.3
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 40 ALHSSTIIS--TFCDWQLSSAVMSTVGKVIKCLAAVAWEAGKPLSIEEIE 183
A+ TI++ +C W+ A++S + + ++ AA A A +PL E+ E
Sbjct: 151 AILIGTIVALVVYCIWKPYQALLSCIERRLRRKAAAAATAAEPLPPEKKE 200
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,513,663
Number of Sequences: 37544
Number of extensions: 198663
Number of successful extensions: 696
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 506210712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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