Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0223
(348 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12420| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 1e-22
SB_46589| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.34
SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.78
SB_37040| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.78
SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71) 29 1.4
SB_37880| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.8
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 27 3.2
SB_25818| Best HMM Match : Pkinase (HMM E-Value=1.7e-20) 27 3.2
SB_19564| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.2
SB_43329| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.2
SB_59432| Best HMM Match : MORN (HMM E-Value=9.3e-26) 27 4.2
SB_24608| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-14) 27 5.5
SB_9507| Best HMM Match : Cadherin (HMM E-Value=0) 26 7.3
SB_22169| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.3
SB_48787| Best HMM Match : 7tm_3 (HMM E-Value=0) 26 9.7
SB_42496| Best HMM Match : rve (HMM E-Value=0.02) 26 9.7
SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3) 26 9.7
SB_14562| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.7
SB_5616| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.7
SB_28083| Best HMM Match : Uso1_p115_C (HMM E-Value=5.7) 26 9.7
SB_8880| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.7
SB_6987| Best HMM Match : RVT_1 (HMM E-Value=2.2e-21) 26 9.7
>SB_12420| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 101 bits (243), Expect = 1e-22
Identities = 47/60 (78%), Positives = 50/60 (83%)
Frame = +1
Query: 121 IKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPVVL 300
I C AAVAWE KPLSIE IEV PPKA EVR+KI ATGVCHTDAYTLSG DPEG+FP +L
Sbjct: 2 ITCQAAVAWEPKKPLSIETIEVAPPKAHEVRIKILATGVCHTDAYTLSGVDPEGLFPCIL 61
>SB_46589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 562
Score = 30.7 bits (66), Expect = 0.34
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +1
Query: 142 AWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTL 261
AW G L ++ V P A + +IT TG T AYTL
Sbjct: 361 AWSFGLKLGLKSQNVGPGPAYLIPARITRTGTDGTPAYTL 400
>SB_38582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 29.5 bits (63), Expect = 0.78
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = +2
Query: 77 IGSCPVQSCQQSVK*LSAWPQSRGKQASRCPSRRLKWTRQKPVKCALRSRPPESAILTRI 256
+GS P +S + +K +P+ R + +S S L K K R E+AIL R
Sbjct: 987 VGSGP-ESIKMRIKGSRKFPKMRRQLSSTTTSAEL--IEHKQSKTTPSGRKLETAILRRA 1043
Query: 257 HSPEKI 274
HSP+ +
Sbjct: 1044 HSPQTV 1049
>SB_37040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 29.5 bits (63), Expect = 0.78
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 107 QSVK*LSAWPQSRGKQASRCPSRRLKWTRQKPVKCALRSRPPESAILTRIH 259
QS L+ P +RG Q + R KW + P KC ++ + E A++ R+H
Sbjct: 3 QSGNALTPLPHTRGIQTNTLLLR--KWAVEAPSKCRMKGQTKE-AVVQRVH 50
>SB_14000| Best HMM Match : DUF1213 (HMM E-Value=0.71)
Length = 1281
Score = 28.7 bits (61), Expect = 1.4
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 104 QQSVK*LSAWPQSRGKQASRCPSRRLKWTRQKPV-KCALRSRPPESAILTRIHSPE 268
Q S K ++ PQ + KQASR LK KP + SRP ++++ T+ P+
Sbjct: 52 QASRKTKTSKPQDQDKQASRPRQASLKTKTSKPQDQDKQASRPRQASLKTKTSKPQ 107
Score = 26.6 bits (56), Expect = 5.5
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 104 QQSVK*LSAWPQSRGKQASRCPSRRLKWTRQKPV-KCALRSRPPESAILTRIHSPE 268
Q S+K ++ PQ + KQA+R K KP + SRP ++++ T+ P+
Sbjct: 30 QASLKTKTSKPQDQDKQATRPRQASRKTKTSKPQDQDKQASRPRQASLKTKTSKPQ 85
Score = 25.8 bits (54), Expect = 9.7
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 104 QQSVK*LSAWPQSRGKQASRCPSRRLKWTRQKPV-KCALRSRPPESAILTRIHSPE 268
Q S+K ++ PQ + KQASR LK KP + +RP ++ T+ P+
Sbjct: 74 QASLKTKTSKPQDQDKQASRPRQASLKTKTSKPQDQDKQAARPRQANRKTKTSKPQ 129
Score = 25.8 bits (54), Expect = 9.7
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 104 QQSVK*LSAWPQSRGKQASRCPSRRLKWTRQKPVKCALRSRPPE 235
Q S K ++ PQ + KQASR S + K ++ K + S+P +
Sbjct: 957 QASRKTKTSKPQDQDKQASRQASCKTKTSKTSKPKTSKTSKPQD 1000
>SB_37880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -2
Query: 230 VAVILTRTSPAFGGSTSISSMDSGLPASHATAAKHLITLPTVDMTALDN 84
V+V S + G +S SS +P+S + T+PT DM A N
Sbjct: 3 VSVAENTPSSSSGDPSSHSSQSQSVPSSMDSGGSTAATVPTQDMVAFAN 51
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 27.5 bits (58), Expect = 3.2
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 134 PQSRGKQASRCPSRRLKWTRQKPVKCALRSRPPESAILTRIHSPEKI 274
P+ R + SR P R + + + RSR P+S + +R SP +I
Sbjct: 295 PRKRRRSKSRSPRRYRDSSSCRRRRSRSRSRSPKSRLRSRSRSPYRI 341
>SB_25818| Best HMM Match : Pkinase (HMM E-Value=1.7e-20)
Length = 956
Score = 27.5 bits (58), Expect = 3.2
Identities = 15/71 (21%), Positives = 32/71 (45%)
Frame = +2
Query: 134 PQSRGKQASRCPSRRLKWTRQKPVKCALRSRPPESAILTRIHSPEKILRECFL*YWDMKA 313
P+SR + R S + + V C + +A+L ++ + + R+C YWD
Sbjct: 462 PESRDPEVIRAQSDAERSRLLEDVSCMEQFGEKWAAVLDKVLPTKPVFRKC---YWDDSE 518
Query: 314 AESWRVSVRES 346
++ + +R +
Sbjct: 519 GRAFEIHLRRA 529
>SB_19564| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 27.5 bits (58), Expect = 3.2
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -2
Query: 260 SVYASVWQTPVAVILTRTSPAFGGSTSISSMDSGLPASHATAAKHLITLP 111
S AS ++PV +++R + G S ++ SG P A + I +P
Sbjct: 321 SASASCSKSPVRPMVSRRIASAGSSQGVTPRQSGTPTQGAQPKRRSIAMP 370
>SB_43329| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 282
Score = 27.1 bits (57), Expect = 4.2
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 185 WTRQKPVKCALRSRPPESAILTRIH 259
+ R PV+C ++S PP S IH
Sbjct: 137 YNRDTPVRCRIQSYPPRSLSTEEIH 161
>SB_59432| Best HMM Match : MORN (HMM E-Value=9.3e-26)
Length = 1362
Score = 27.1 bits (57), Expect = 4.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 172 EEIEVDPPKAGEVRVKITATGVCHTDAYTLSG 267
EE P+A +V++K A G CHT A + G
Sbjct: 154 EEKHETQPQATDVKIKSIACGDCHTLALSSRG 185
>SB_24608| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-14)
Length = 390
Score = 26.6 bits (56), Expect = 5.5
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -1
Query: 273 IFSGECIRVSMADSGGRD 220
IF G+C+ V+M+DS G++
Sbjct: 88 IFRGKCLEVNMSDSPGKE 105
>SB_9507| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2735
Score = 26.2 bits (55), Expect = 7.3
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +1
Query: 157 KPLSIEEIEVDPPKAGEVRVKITA----TGVCHTDAYTLSGKDPEGVFPV 294
+PLS + + GE +++ A TG+ Y+++G DP+G F +
Sbjct: 1266 EPLSYSAVVREDVDIGERLLRVRAFDEDTGIYKIFKYSIAGGDPQGQFKI 1315
>SB_22169| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 26.2 bits (55), Expect = 7.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 157 KPLSIEEIEVDPPKAGEVRVKITATGVCHT 246
KPLSI E + P ++++TA+G+C T
Sbjct: 258 KPLSISEPLL--PSVSGTKLEVTASGICDT 285
>SB_48787| Best HMM Match : 7tm_3 (HMM E-Value=0)
Length = 1142
Score = 25.8 bits (54), Expect = 9.7
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = -1
Query: 216 NAHFTGFWRVHFNLLDGQRLACFPRDCGQAL 124
N F +W HFN + L +P C +L
Sbjct: 330 NPWFQEYWEHHFNCSLNETLGKYPTKCNDSL 360
>SB_42496| Best HMM Match : rve (HMM E-Value=0.02)
Length = 371
Score = 25.8 bits (54), Expect = 9.7
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = +2
Query: 140 SRGKQASRCPSRRLKWTRQK-----PVKCALRSRPPESAILTRIHSPEKILRECF 289
+RG +S L W K P ++R + I TR++ EK ++ CF
Sbjct: 61 TRGMSSSSLTESELWWKGPKLLSASPASWPSQTRNEDEIIATRVNRKEKPIKSCF 115
>SB_29610| Best HMM Match : Extensin_2 (HMM E-Value=2.3)
Length = 1353
Score = 25.8 bits (54), Expect = 9.7
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +2
Query: 104 QQSVK*LSAWPQSRGKQASRCPSRRLKWTRQKPVKCALRSRPPESAILTRIHSPE 268
Q S K ++ PQ + KQA+R P ++ + T K + +RP +++ T+ P+
Sbjct: 649 QASRKTKTSKPQDQDKQAAR-PRQKSRKTNTKKPQDKQAARPRQASRKTKTSKPQ 702
>SB_14562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 237
Score = 25.8 bits (54), Expect = 9.7
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 182 KWTRQKPVKCALRSRPPESAILTRIHSPEKIL 277
KWT Q P +CAL + I+T IH E I+
Sbjct: 183 KWTLQPPPECALEC---DKEIVTVIHPGEIIV 211
>SB_5616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 193
Score = 25.8 bits (54), Expect = 9.7
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -1
Query: 276 RIFSGECIRVSMADSGGRDLNAHFTGFWRV 187
RIF+ E + V M +GG D W++
Sbjct: 94 RIFTSETVNVVMTTAGGLDSKDRSVRLWKI 123
>SB_28083| Best HMM Match : Uso1_p115_C (HMM E-Value=5.7)
Length = 307
Score = 25.8 bits (54), Expect = 9.7
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 169 IEEIEVDPPKAGEVRVKIT 225
IEEI V+ P GEV+ KIT
Sbjct: 126 IEEISVNEPTFGEVKNKIT 144
>SB_8880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 25.8 bits (54), Expect = 9.7
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 290 GNTPSGSFPESVYASVWQTPVAVILTRTSPAFGGSTS 180
G P+ + VW +PVA++++ GGSTS
Sbjct: 32 GRLPTNKKRPPITIKVWLSPVAILISIEFLQPGGSTS 68
>SB_6987| Best HMM Match : RVT_1 (HMM E-Value=2.2e-21)
Length = 521
Score = 25.8 bits (54), Expect = 9.7
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 80 GSCPVQSCQQSVK*LSAWPQSRGKQASRCPS-RRLKWTRQKPVKCALRSRPPESAILTRI 256
G + CQ V L WP + +RC + +L+ R++P+ + P S + T +
Sbjct: 449 GHLGITKCQGRVSSLVWWPLITKQMVNRCQTCAKLRPERREPLMALILPNLPWSRVGTDL 508
Query: 257 HSPEK 271
E+
Sbjct: 509 FELEQ 513
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,686,982
Number of Sequences: 59808
Number of extensions: 217219
Number of successful extensions: 717
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 523129866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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