Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0218
(538 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 1e-17
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 62 2e-10
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 61 5e-10
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 61 6e-10
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 58 5e-09
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 50 1e-06
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 49 3e-06
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 41 7e-04
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 36 0.016
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 34 0.085
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 34 0.085
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.26
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 32 0.34
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 32 0.34
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.79
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 31 0.79
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 30 1.4
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 29 1.8
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_31039| Best HMM Match : Fibrinogen_C (HMM E-Value=4.2e-39) 29 3.2
SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07) 28 5.6
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 86.2 bits (204), Expect = 1e-17
Identities = 35/98 (35%), Positives = 58/98 (59%)
Frame = +3
Query: 240 PDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPD 419
P+ + +PFNKNFY+ HP + K+S E+++ R + VSG P F F +
Sbjct: 467 PEKSKIDYKPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDE 526
Query: 420 YVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTG 533
+ ++ + Y +PT IQ Q PIA+SG++++G+A+TG
Sbjct: 527 QMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTG 564
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 66.1 bits (154), Expect = 2e-11
Identities = 32/103 (31%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Frame = +3
Query: 225 QNMRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFE 401
+ ++ D +V QPF K+FY P + K +P E +E+R + E + V G P++ +
Sbjct: 49 EELQPVDHKTVVYQPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWA 108
Query: 402 EANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQT 530
+ + +K Y++PTPIQAQ P+ MSG++++ + T
Sbjct: 109 QTGVQLKILDVLKKNSYEKPTPIQAQAIPVIMSGRDMIAIVMT 151
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 62.5 bits (145), Expect = 2e-10
Identities = 25/66 (37%), Positives = 43/66 (65%)
Frame = +3
Query: 336 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 515
+R + ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + ++++
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDII 142
Query: 516 GVAQTG 533
GVA+TG
Sbjct: 143 GVAETG 148
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 61.3 bits (142), Expect = 5e-10
Identities = 27/83 (32%), Positives = 47/83 (56%)
Frame = +3
Query: 285 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 464
Y HPT+ + +V++ R+ E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 465 PIQAQGWPIAMSGKNLVGVAQTG 533
PIQ Q P+ +SG++++ A TG
Sbjct: 221 PIQMQVLPVLLSGRDVMVCASTG 243
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 60.9 bits (141), Expect = 6e-10
Identities = 27/56 (48%), Positives = 37/56 (66%)
Frame = +3
Query: 312 RSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 479
R +EV+ YR + ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 58.0 bits (134), Expect = 5e-09
Identities = 27/88 (30%), Positives = 48/88 (54%)
Frame = +3
Query: 270 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 449
F ++YD + V + S V+E R + + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 450 YKEPTPIQAQGWPIAMSGKNLVGVAQTG 533
++ PTPIQ Q MSG++++G+A+TG
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDIIGLAETG 119
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/61 (40%), Positives = 35/61 (57%)
Frame = +3
Query: 351 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQT 530
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++++ AQT
Sbjct: 698 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQT 757
Query: 531 G 533
G
Sbjct: 758 G 758
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/61 (40%), Positives = 35/61 (57%)
Frame = +3
Query: 351 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQT 530
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++++ AQT
Sbjct: 121 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQT 180
Query: 531 G 533
G
Sbjct: 181 G 181
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +3
Query: 324 EVEEYRNNHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 491
++ +R+ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
Query: 492 AMSGKNLVG 518
G G
Sbjct: 197 MAHGPKKSG 205
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 47.6 bits (108), Expect = 6e-06
Identities = 22/58 (37%), Positives = 31/58 (53%)
Frame = +3
Query: 360 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTG 533
VSG I F E F + + + GY+ PTP+Q PI M+G++L+ AQTG
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTG 526
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 40.7 bits (91), Expect = 7e-04
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +3
Query: 387 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTG 533
++ F + G+ G+ PT IQ QG P+A+SG++++G A+TG
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTG 97
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +3
Query: 387 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTG 533
I FE+ + + + V GYK+PTP+Q PI ++L+ AQTG
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMACAQTG 922
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 36.3 bits (80), Expect = 0.016
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 429 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTG 533
+ V +G+ PTPIQA P+A+ GK++ A TG
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDVCACAATG 57
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 33.9 bits (74), Expect = 0.085
Identities = 13/46 (28%), Positives = 28/46 (60%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTG 533
FE+ + G+ G+ +P+PIQ + P+A++G++++ A+ G
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNG 94
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 33.9 bits (74), Expect = 0.085
Identities = 13/46 (28%), Positives = 28/46 (60%)
Frame = +3
Query: 396 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTG 533
FE+ + G+ G+ +P+PIQ + P+A++G++++ A+ G
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNG 94
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 32.3 bits (70), Expect = 0.26
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 429 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTG 533
QG+K MG+ T IQ + + G++L+G A+TG
Sbjct: 585 QGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTG 619
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 31.9 bits (69), Expect = 0.34
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Frame = +3
Query: 348 HEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK--NL 512
HEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ ++ N+
Sbjct: 86 HEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVNM 145
Query: 513 VGVAQTG 533
+ +Q+G
Sbjct: 146 IAQSQSG 152
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 31.9 bits (69), Expect = 0.34
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +3
Query: 351 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQT 530
EV + G P + F +Y + +G PT +Q WP + G+++ GVA
Sbjct: 178 EVLIQGESAPRPFLTMNNSTFYEYGPR----LGVTVPTSLQKHMWPSLLRGRDVAGVAIE 233
Query: 531 G 533
G
Sbjct: 234 G 234
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 0.79
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +3
Query: 372 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 485
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 30.7 bits (66), Expect = 0.79
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 444 MGYKEPTPIQAQGWPIAMSGKNLVGVAQTG 533
MG K+PT IQ P + G++ +G A+TG
Sbjct: 25 MGIKKPTEIQLNCVPPILQGRDCIGCAKTG 54
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +3
Query: 282 FYDPHPTVLKRSPYEVEEYRNN--HEVTVSGVEVHNPIQYFEEANFPDY 422
+ D VL E EE NN H++ + + +HNP YFE+ + DY
Sbjct: 217 YRDEDDGVLVPIEQEAEEEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 414 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTG 533
P V++ +K MG +P PIQ + P S K+L+ ++TG
Sbjct: 169 PKLVEK-LKKMGITKPVPIQEKALPSVFSHKSLLIKSETG 207
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 414 PDYVQQGVKTMGYKEPTPIQAQGWPIA-MSGKNLVGVAQTG 533
PD + + + G+ +PTPIQ+ P A + ++++G A+TG
Sbjct: 139 PD-ILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETG 178
>SB_31039| Best HMM Match : Fibrinogen_C (HMM E-Value=4.2e-39)
Length = 411
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -2
Query: 267 VGVKQNPNLGDACSDLQRILFSHQ--ILQILQIYCH 166
+GVKQ P L +CS++Q F+H I I CH
Sbjct: 269 IGVKQQPPLLPSCSEIQSEHFAHTSGIFPIALTPCH 304
>SB_19782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -2
Query: 231 CSDLQRILFSHQILQILQIYCHRC-QIETN 145
CS +L +IL+ +YC +C Q ETN
Sbjct: 14 CSLCSEVLTEPKILRCFHVYCQKCLQAETN 43
>SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07)
Length = 401
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -2
Query: 162 CQIETNYRRICCLLQIWN-HRFHGYYSS 82
C + +YRR CC L +W H + Y+SS
Sbjct: 218 CCVRVDYRRKCC-LHVWRVHTTNTYWSS 244
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,308,405
Number of Sequences: 59808
Number of extensions: 262920
Number of successful extensions: 780
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1215643300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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