Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0215
         (445 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X69018-1|CAA48783.1|  395|Drosophila melanogaster TWINE protein.       29   2.8  
M94158-1|AAA28413.1|  426|Drosophila melanogaster cdc25 homologu...    29   2.8  
AY061266-1|AAL28814.1|  426|Drosophila melanogaster LD19391p pro...    29   2.8  
AE014134-2683|AAF53508.1|  426|Drosophila melanogaster CG4965-PA...    29   2.8  
AY142217-1|AAN52145.1| 3803|Drosophila melanogaster transformati...    29   3.8  
AE013599-60|AAF57342.2| 3805|Drosophila melanogaster CG33554-PA,...    29   3.8  

>X69018-1|CAA48783.1|  395|Drosophila melanogaster TWINE protein.
          Length = 395

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -2

Query: 219 MKSIYLKLVKSLNGMKLMRRNSIEPEMLNPIDERCVLSCI 100
           MK +  K + S+N  ++MR    EPE++  + + C L C+
Sbjct: 165 MKKMQRKTL-SMNDAEIMRALGDEPELIGDLSKPCTLPCL 203


>M94158-1|AAA28413.1|  426|Drosophila melanogaster cdc25 homologue
           protein.
          Length = 426

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -2

Query: 219 MKSIYLKLVKSLNGMKLMRRNSIEPEMLNPIDERCVLSCI 100
           MK +  K + S+N  ++MR    EPE++  + + C L C+
Sbjct: 196 MKKMQRKTL-SMNDAEIMRALGDEPELIGDLSKPCTLPCL 234


>AY061266-1|AAL28814.1|  426|Drosophila melanogaster LD19391p
           protein.
          Length = 426

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -2

Query: 219 MKSIYLKLVKSLNGMKLMRRNSIEPEMLNPIDERCVLSCI 100
           MK +  K + S+N  ++MR    EPE++  + + C L C+
Sbjct: 196 MKKMQRKTL-SMNDAEIMRALGDEPELIGDLSKPCTLPCL 234


>AE014134-2683|AAF53508.1|  426|Drosophila melanogaster CG4965-PA
           protein.
          Length = 426

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = -2

Query: 219 MKSIYLKLVKSLNGMKLMRRNSIEPEMLNPIDERCVLSCI 100
           MK +  K + S+N  ++MR    EPE++  + + C L C+
Sbjct: 196 MKKMQRKTL-SMNDAEIMRALGDEPELIGDLSKPCTLPCL 234


>AY142217-1|AAN52145.1| 3803|Drosophila melanogaster
           transformation/transcription domain-associated protein
           protein.
          Length = 3803

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
 Frame = +3

Query: 102 YNSRRNVHRLDLTSRVQYYFVSSISFRLNF*LISNKSTSLYLALIIIQFSK---INLYSM 272
           +++   +HRL +T  ++ +  + I+  L      N+   L    III+  K    +  S 
Sbjct: 142 FDTHEMIHRLPITESLRQHVKTIITMMLKILKTDNEENVLVCLRIIIELHKHFRPSFNSE 201

Query: 273 VFT*MTTTRLKEQKPMGIINTRVCLPF 353
               +   RL E   + +I T +C PF
Sbjct: 202 GMVEIPKERLDESHALEVIVTDLCGPF 228


>AE013599-60|AAF57342.2| 3805|Drosophila melanogaster CG33554-PA,
           isoform A protein.
          Length = 3805

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
 Frame = +3

Query: 102 YNSRRNVHRLDLTSRVQYYFVSSISFRLNF*LISNKSTSLYLALIIIQFSK---INLYSM 272
           +++   +HRL +T  ++ +  + I+  L      N+   L    III+  K    +  S 
Sbjct: 142 FDTHEMIHRLPITESLRQHVKTIITMMLKILKTDNEENVLVCLRIIIELHKHFRPSFNSE 201

Query: 273 VFT*MTTTRLKEQKPMGIINTRVCLPF 353
               +   RL E   + +I T +C PF
Sbjct: 202 GMVEIPKERLDESHALEVIVTDLCGPF 228


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,657,106
Number of Sequences: 53049
Number of extensions: 287562
Number of successful extensions: 363
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 363
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1438687674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)