Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0212
(730 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC3H7.07c |||phosphoserine phosphatase |Schizosaccharomyces po... 85 1e-17
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 42 7e-05
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 35 0.010
SPBC25B2.07c |mug164||microtubule-associated protein|Schizosacch... 30 0.39
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.51
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 29 0.68
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 29 0.68
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 29 0.90
SPAC7D4.11c |sec39||secretory pathway protein Sec39 |Schizosacch... 29 0.90
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom... 27 2.7
SPAC16C9.02c |||S-methyl-5-thioadenosine phosphorylase|Schizosac... 27 2.7
SPBC1921.03c |mex67||mRNA export receptor Mex67|Schizosaccharomy... 26 6.3
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 25 8.4
SPCC663.15c |||conserved fungal protein|Schizosaccharomyces pomb... 25 8.4
>SPBC3H7.07c |||phosphoserine phosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 298
Score = 84.6 bits (200), Expect = 1e-17
Identities = 59/170 (34%), Positives = 92/170 (54%), Gaps = 3/170 (1%)
Frame = +3
Query: 165 VCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQEALKKRLDIIRP-NVGQ 341
V FD+DST+IQ E IDELA G EV +T+ AM G + FQE+L++R+ +++ +V
Sbjct: 79 VVFDMDSTLIQQECIDELAAEAGIQKEVATITSLAMNGEIDFQESLRRRVSLLQGLSVDV 138
Query: 342 IREFIEKFPVRLTPGITELVKELHERGVIVYLVSGGFRSLIEPVAERLNIPTINIFANRL 521
I + I K + TPG +L L + G + + SGGF + E V +L++ +AN L
Sbjct: 139 INKVIGK--ITFTPGAKQLCHCLKQMGATLVVASGGFVPMAEYVKGQLDLD--YAYANVL 194
Query: 522 KFYFNGEYAGFDENEPTSRSGGKGLVVRRLKELHGYQRL--VIVGDGATD 665
+F +G++ K ++R +E G +L + VGDGA D
Sbjct: 195 EFSDDGKFLTGKVQGAIVDGQRKASILREKREELGLNKLETMAVGDGAND 244
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 42.3 bits (95), Expect = 7e-05
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 6/209 (2%)
Frame = -1
Query: 700 PMKPSAGGLASASVAPSPTITRRWYPCSSFSRLTTKPLPPDLDVGSFSSKPAYSPLK*NL 521
P S + S S PS T + P SS+S T LP S +S Y+P
Sbjct: 78 PTSSSEPSIFSESATPSETNSYS-SPVSSYSDPATSQLPSSTSFFSPTSSE-YTPSSTES 135
Query: 520 SRLAKMLIVGMFSLSATGSIRLLNPPETRYTMTPLSCNSF------TNSVIPGVSLTGNF 359
S L V L ++ S+ + + + PL+ ++F T+S P VS T +
Sbjct: 136 SSLLDPSSVSSAILPSSTSVEVSISSSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSS 195
Query: 358 SMNSLI*PTLGLMMSSLFFNASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVES 179
+ +S PT S L ++ + P +S+ S LTSS +L++SS+PS+ + S
Sbjct: 196 TFSSAA-PT-STSSSYLSSSSVVSSSSSPSSSSSSTLTSS----SLSTSSIPSTSSSSSS 249
Query: 178 TSKQTQSAVLNNSWTVC*GDITLIDTSES 92
TS S+ +++ + ++I +S S
Sbjct: 250 TSSSLSSSSSSSTASSSSSSSSIISSSSS 278
Score = 33.5 bits (73), Expect = 0.032
Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 5/178 (2%)
Frame = -1
Query: 673 ASASVAPSPTITRRWYPCSSFSRLTTKPLPPD----LDVGSFSSKPAYSPLK*NLSRLAK 506
+S S A P+ T SS S ++ PL L + SS+P+ S + A
Sbjct: 142 SSVSSAILPSSTSVEVSISSSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAA 201
Query: 505 MLIVGMFSLSATGSIRLLNPPETRYTMTPLSCNSFTNSVIPGVSLTGNFSMNSLI*PTLG 326
LS++ + + P + + T L+ +S + S IP S + + + +SL +
Sbjct: 202 PTSTSSSYLSSSSVVSSSSSPSSSSSST-LTSSSLSTSSIPSTSSSSSSTSSSLSSSSSS 260
Query: 325 LMMSSLFFNASWNVILPPIASAVS-LLTSSPFPQNLASSSMPSSCMTVESTSKQTQSA 155
SS ++S ++I +S+ S TSS + +SSS P+S + S+S + S+
Sbjct: 261 STASSS--SSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSS 316
Score = 29.1 bits (62), Expect = 0.68
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 4/200 (2%)
Frame = -1
Query: 718 PRYPRKPMKPSAGGLASASVAPSPTITRRWYPCSSFSRLTTKPLPPDLDVG-SFSSKPAY 542
P + P S S+ PS T + SS S P ++V S SS +
Sbjct: 109 PATSQLPSSTSFFSPTSSEYTPSSTESSSLLDPSSVSSAIL-PSSTSVEVSISSSSLSSS 167
Query: 541 SPLK*N-LSRLAKMLIVGMFSLSATGSIRLLNPPETRYTMTPLSCNSF-TNSVIPGVSLT 368
PL + S L+ S+S+T S + T + + LS +S ++S P S +
Sbjct: 168 DPLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSS 227
Query: 367 GNFSMNSLI*PTL-GLMMSSLFFNASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCM 191
+ +SL ++ SS ++S + ++ S +SS + +SSS P+S
Sbjct: 228 STLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTS 287
Query: 190 TVESTSKQTQSAVLNNSWTV 131
+ S+S + S+ + S T+
Sbjct: 288 STISSSSSSSSSPTSTSSTI 307
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 35.1 bits (77), Expect = 0.010
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 2/116 (1%)
Frame = -1
Query: 430 TMTPLSCNSFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFNASWNVILPPIASAVSL 251
T TP++ ++ NS P SLT ++NS P + SS N+S PI S+ +
Sbjct: 2552 TSTPITSSTVVNSSTPITSLT---ALNSST-P----ITSSSVLNSS-----TPITSSTVV 2598
Query: 250 LTSSPFPQN-LASSSMPSSCMTVESTSKQ-TQSAVLNNSWTVC*GDITLIDTSESV 89
TS+P + + +SS P + T +TS T S+VLN+S + T ++TS S+
Sbjct: 2599 NTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPIT--SSTALNTSTSI 2652
>SPBC25B2.07c |mug164||microtubule-associated
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 29.9 bits (64), Expect = 0.39
Identities = 51/195 (26%), Positives = 79/195 (40%), Gaps = 5/195 (2%)
Frame = -1
Query: 727 VTHPRYPRKPMKPSAGGLA----SASVAPSPTITRRWYPCSSFSRLTTKPLPPDLDVGSF 560
VT ++ KPS +A +A +A P + S SRL P VG F
Sbjct: 144 VTTSKHVATITKPSTSSIARMSSNARIAAIPR-AKSSMAVRSPSRLGNGPNVRSPKVG-F 201
Query: 559 SSKPAYSPLK*NLSRLAKMLIVGMFSLSATGSIRLLNPPETRYTMTPLSCNSFTNSVIPG 380
++K SP+ + K S+ + G+ ++ PP T PLS + TN+
Sbjct: 202 NAKSDDSPVVKSPGSNDKPSASPRISVRSLGNSSVVRPPTRTSTTRPLSRVNVTNA---- 257
Query: 379 VSLTGNFSMNSLI*PTLGLMMSSLFFNASWNVILPPIASAVSLLTSSPFPQNLASSSM-P 203
+G+ S NS S + NAS ++ P A+ S F +N AS++ P
Sbjct: 258 ---SGSISKNS-------TSPSKVKVNASTKIVRPVSAAQTVRPGSRIFRENSASNTQRP 307
Query: 202 SSCMTVESTSKQTQS 158
+ T ST + S
Sbjct: 308 NVSATSNSTVRVASS 322
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 29.5 bits (63), Expect = 0.51
Identities = 26/87 (29%), Positives = 43/87 (49%)
Frame = -1
Query: 415 SCNSFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFNASWNVILPPIASAVSLLTSSP 236
+C++ T S +S +G S S+ +G SS +F S + P +S+ S +SSP
Sbjct: 110 ACSTCTIST-SSLSYSGTISSTSIAPSMIGTRTSSSYFITS-SSSTP--SSSSSSSSSSP 165
Query: 235 FPQNLASSSMPSSCMTVESTSKQTQSA 155
+ SSS S + S+SK + S+
Sbjct: 166 SSSSSKSSSSSKSSSSSSSSSKSSSSS 192
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 29.1 bits (62), Expect = 0.68
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 10/170 (5%)
Frame = -1
Query: 619 SSFSRLT--TKPLPPDLDVGSFSSKPAYSPLK*NLSRLAKMLIVGMFSLSATGS--IRLL 452
+SF LT TK +P S +P N ++ + LI+ F+ S S ++
Sbjct: 403 TSFPSLTSSTKKIPSTTLPTSSKMITTTTPSVSNNTQ-SSFLIISTFTSSYEHSEPFKVS 461
Query: 451 NPPETRYTMTPLSCNSFTNSVIPGVSLTGNFSMNSLI*P------TLGLMMSSLFFNASW 290
+ P T + +S +S ++ I S N +++S + T+ + S+ ++ S
Sbjct: 462 SVPLTSNNFSSISHSSASSLPITPSSYLSNTTLHSSVQSSQSSQFTVSVPSSTQSYSTSS 521
Query: 289 NVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNS 140
N PI + SL S FP + SSS S ++ T+ QS+ L++S
Sbjct: 522 N-FTTPITISTSL---SSFPTTIVSSSFQYSSLSSNVTTTNAQSSSLSSS 567
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.1 bits (62), Expect = 0.68
Identities = 42/154 (27%), Positives = 69/154 (44%)
Frame = -1
Query: 625 PCSSFSRLTTKPLPPDLDVGSFSSKPAYSPLK*NLSRLAKMLIVGMFSLSATGSIRLLNP 446
P +S S T+ +PP GS S +P S + + + S S+T + NP
Sbjct: 109 PSTSTSCTTSTSIPPT--GGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNS--NP 164
Query: 445 PETRYTMTPLSCNSFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFNASWNVILPPIA 266
T T SC + T+ IP G+ S+++ I PT+ +S S ++ +PP +
Sbjct: 165 LPT----TSTSCTTSTS--IPPTG--GSSSLSTPITPTVPPTSTS-----STSIPIPPTS 211
Query: 265 SAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQT 164
++ + SSP P S + +S T S+S T
Sbjct: 212 TSSTDTNSSPLPTTSTSCTTSTSIPTGGSSSLST 245
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 28.7 bits (61), Expect = 0.90
Identities = 35/135 (25%), Positives = 59/135 (43%)
Frame = -1
Query: 571 VGSFSSKPAYSPLK*NLSRLAKMLIVGMFSLSATGSIRLLNPPETRYTMTPLSCNSFTNS 392
V SFSS P+ + S L+ + + T +P ET TMT +C+S
Sbjct: 528 VSSFSSSPSPTSSFSGTSALSSSS--NEETTTTTQVTYTTSPEETTTTMTTTTCSSRPEE 585
Query: 391 VIPGVSLTGNFSMNSLI*PTLGLMMSSLFFNASWNVILPPIASAVSLLTSSPFPQNLASS 212
I VS T S + + ++S + +++ ++ ++S+ S+ +SS + SS
Sbjct: 586 TISTVSTTSTVSESG----SSSASITSTYPSSTLSMTTSHLSSS-SVHSSSAHSSSSRSS 640
Query: 211 SMPSSCMTVESTSKQ 167
SM STS Q
Sbjct: 641 SMSLPPSAGSSTSLQ 655
>SPAC7D4.11c |sec39||secretory pathway protein Sec39
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 769
Score = 28.7 bits (61), Expect = 0.90
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = -1
Query: 283 ILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTV 131
+L I A++LLT P +S+ SC +S K ++ +LN T+
Sbjct: 334 LLMEITKAIALLTQLKVPAPTFKTSVSISCSNFDSQIKYLENVLLNALGTI 384
>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 772
Score = 27.1 bits (57), Expect = 2.7
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -1
Query: 280 LPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWT 134
LP + AVS +SS P + S+S +S S+ K T S SWT
Sbjct: 196 LPALDHAVSSSSSSDLPSDPNSASYIASSKQKASSLKLTSSLKKFYSWT 244
>SPAC16C9.02c |||S-methyl-5-thioadenosine
phosphorylase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 307
Score = 27.1 bits (57), Expect = 2.7
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 550 PAYSPLK*NLSRLAKMLIVGMFSLSATGSIRLLNPPE 440
P P + N++ L + ++ + S SA GS+R PPE
Sbjct: 68 PTEVPSRANIAALKSLGVLAIVSFSAVGSLREDIPPE 104
>SPBC1921.03c |mex67||mRNA export receptor Mex67|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 596
Score = 25.8 bits (54), Expect = 6.3
Identities = 9/25 (36%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -1
Query: 292 WNVILPPIASAVSLLTSSPF--PQN 224
WN++LP + +A+ ++ F PQN
Sbjct: 445 WNLVLPSVGAAIKIVVHGQFEEPQN 469
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 25.4 bits (53), Expect = 8.4
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = -1
Query: 418 LSCNSFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFNASWNVILP-PIASAVSLLTS 242
LS +FT S +SLT S S T+ SS+ S ++I+ PI S+ TS
Sbjct: 516 LSTENFT-SASSSLSLTNAKSSLSTPSTTIPTSNSSVSLQTSSSLIISSPIISSSLTATS 574
Query: 241 SPFPQNLASSSMPSSCMTVESTSKQTQSAVLNNSWTVC 128
+ P L S PS+ S + + ++ TVC
Sbjct: 575 TSTPA-LTHSITPSNTSYTSSLIPSSSTDYSSSLITVC 611
>SPCC663.15c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 657
Score = 25.4 bits (53), Expect = 8.4
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3
Query: 518 SISEDVDSWD 489
S+SEDVDSWD
Sbjct: 182 SVSEDVDSWD 191
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,822,245
Number of Sequences: 5004
Number of extensions: 56252
Number of successful extensions: 273
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 272
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 343230174
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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