Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0212
(730 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0457 - 23800451-23800576,23801259-23801312,23801390-238015... 218 4e-57
12_02_0452 - 19188601-19188726,19189364-19189417,19189493-191896... 162 2e-40
01_07_0175 - 41715304-41716760,41717200-41717500,41718109-41718369 33 0.18
06_03_0706 + 23719392-23719641,23720337-23720383,23720988-237210... 32 0.54
12_01_0090 + 717524-719080 31 1.2
06_01_0817 - 6185881-6187074 30 1.6
05_02_0028 - 5764980-5766374 30 1.6
03_06_0421 - 33797836-33797992,33798450-33798549,33798646-337987... 29 2.9
09_04_0198 + 15528576-15528645,15528746-15528893,15529182-155293... 29 3.8
08_01_0998 - 10136050-10138356 29 3.8
07_02_0009 - 11716174-11716435,11716837-11717459,11718385-117184... 29 3.8
03_02_0254 + 6862762-6863663,6863994-6864241,6864323-6864465,686... 29 3.8
02_01_0567 - 4168164-4168250,4168672-4168828,4168951-4169090,417... 29 5.0
09_02_0456 - 9525067-9525422,9525679-9528226 28 6.6
02_05_0767 + 31609773-31610174,31610409-31610501,31610608-316106... 28 6.6
02_02_0109 + 6830802-6833412,6833491-6833861 28 6.6
01_06_0768 - 31829753-31829851,31830454-31830593,31830729-318308... 28 6.6
08_02_0657 - 19749835-19751942,19753123-19753561 28 8.7
07_01_0989 + 8348706-8348882,8348988-8349028,8350071-8350120,835... 28 8.7
03_05_0056 - 20349217-20349484,20349563-20350032,20350049-203504... 28 8.7
02_05_0712 + 31130650-31130786,31130927-31130980,31131076-311312... 28 8.7
>11_06_0457 -
23800451-23800576,23801259-23801312,23801390-23801539,
23801919-23802012,23802460-23802567,23802661-23802793,
23802903-23803139,23803488-23803586,23804968-23804983
Length = 338
Score = 218 bits (532), Expect = 4e-57
Identities = 108/198 (54%), Positives = 138/198 (69%), Gaps = 2/198 (1%)
Frame = +3
Query: 123 PQQTVQELFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQEAL 302
P + V E + AD VCFDVDSTV DEGIDELA FCG G V TA+AM G + F+EAL
Sbjct: 115 PSKGVLETWCNADAVCFDVDSTVCLDEGIDELADFCGAGKAVAEWTAKAMTGTVPFEEAL 174
Query: 303 KKRLDIIRPNVGQIREFIEKFPVRLTPGITELVKELHERGVIVYLVSGGFRSLIEPVAER 482
RL +I+P + Q+ + + K P R++PGI +L+K+L V+LVSGGFR +I+PVA
Sbjct: 175 AARLSLIKPYLSQVDDCLVKRPPRISPGIADLIKKLKANNTDVFLVSGGFRQMIKPVASE 234
Query: 483 LNIPTINIFANRLKFYFNGEYAGFDENEPTSRSGGKGLVVRRLKELHGYQRLVIVGDGAT 662
L IP NI AN+L F +GEYAGFD EPTSRSGGK L V+++++ HGY+ LV++GDGAT
Sbjct: 235 LGIPPENIIANQLLFGTSGEYAGFDPTEPTSRSGGKALAVQQIRQNHGYKTLVMIGDGAT 294
Query: 663 DAEASPP--ADGFIGFRG 710
D EA P AD FI + G
Sbjct: 295 DLEARQPGGADLFICYAG 312
>12_02_0452 -
19188601-19188726,19189364-19189417,19189493-19189642,
19189994-19190087,19190607-19190710
Length = 175
Score = 162 bits (394), Expect = 2e-40
Identities = 80/149 (53%), Positives = 108/149 (72%), Gaps = 2/149 (1%)
Frame = +3
Query: 270 MGGNMTFQEALKKRLDIIRPNVGQIREFIEKFPVRLTPGITELVKELHERGVIVYLVSGG 449
M G++ F++AL RL + +P++GQ+ + +EK P R++PGI ELVK L + V VYLVSGG
Sbjct: 1 MTGSVPFEKALAARLSLFKPSLGQVEDCMEKRPPRISPGIAELVKMLKAKNVDVYLVSGG 60
Query: 450 FRSLIEPVAERLNIPTINIFANRLKFYFNGEYAGFDENEPTSRSGGKGLVVRRLKELHGY 629
FR +I+PVA +L IP NIFAN+L F +GEY GFD +EPTSRSGGK + V+ +++ GY
Sbjct: 61 FRQMIKPVAMQLGIPPENIFANQLLFGTSGEYVGFDPSEPTSRSGGKAVAVQNIRQKCGY 120
Query: 630 QRLVIVGDGATDAEASPP--ADGFIGFRG 710
+ L +VGDGATD EA P AD FI + G
Sbjct: 121 RTLFMVGDGATDLEARQPNGADLFICYAG 149
>01_07_0175 - 41715304-41716760,41717200-41717500,41718109-41718369
Length = 672
Score = 33.5 bits (73), Expect = 0.18
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +3
Query: 57 LKSNLQYATLKTLSLVSISVMSPQ-QTVQELFRTADCVCFDVDSTVIQDEGIDELAKFCG 233
L N Q T LV +SP Q +++ R AD + +T++QDE + +K
Sbjct: 533 LVHNSQCTVKSTFCLVKAGAVSPLIQILEDDNREADGAVLEALATLMQDEIWENGSKVIE 592
Query: 234 KGDEVKRLTAEAMGGNMTFQE 296
K V L A GN T QE
Sbjct: 593 KASGVHALLRIAEAGNSTSQE 613
>06_03_0706 +
23719392-23719641,23720337-23720383,23720988-23721060,
23721323-23721540,23721868-23722170,23722322-23722399,
23723064-23723549,23723875-23724312
Length = 630
Score = 31.9 bits (69), Expect = 0.54
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = -1
Query: 286 VILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSA-VLNNS 140
V+ PP +S + + SSP +N + SMPSS T ES S T +A VL+ S
Sbjct: 486 VLAPPSSS--NAVESSPKIENSGTKSMPSSQHTSESDSATTSAAQVLDKS 533
>12_01_0090 + 717524-719080
Length = 518
Score = 30.7 bits (66), Expect = 1.2
Identities = 28/79 (35%), Positives = 42/79 (53%)
Frame = -1
Query: 385 PGVSLTGNFSMNSLI*PTLGLMMSSLFFNASWNVILPPIASAVSLLTSSPFPQNLASSSM 206
P S G +++L+ LGL+ S F +A + LPP SA+SLL +P P L S S+
Sbjct: 13 PRRSAAGGHQLHALL-AKLGLLHRSEFLSALLSR-LPPSPSALSLLLEAP-PAVL-SPSL 68
Query: 205 PSSCMTVESTSKQTQSAVL 149
+ S+S+ SA+L
Sbjct: 69 VCPVIVAFSSSQAPSSALL 87
>06_01_0817 - 6185881-6187074
Length = 397
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 622 CSSFSRLTTKPLPPDLDVGSFSSKPAYSPLK 530
C S TT P+PP S S PAY P++
Sbjct: 31 CRSCGAPTTTPVPPPWSASSDSPPPAYRPIR 61
>05_02_0028 - 5764980-5766374
Length = 464
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -3
Query: 722 APTLPPKANEAVSRWASLGIGSPVPDDHQAL 630
+P L P A A+ R A G+GSPV D H +L
Sbjct: 311 SPPLSPDAAGALRRGAWAGVGSPVNDVHVSL 341
>03_06_0421 -
33797836-33797992,33798450-33798549,33798646-33798700,
33798965-33799085,33799759-33799856,33800004-33800105,
33800196-33800360,33800441-33800522,33800960-33801117,
33801214-33801339,33801533-33801616,33802011-33802100,
33802188-33802258,33803420-33803513,33803585-33803671,
33804258-33804306,33805450-33805538,33805691-33805756,
33806009-33806071,33806174-33806282,33806376-33806446,
33807212-33807298,33807390-33807535,33808848-33808953,
33809429-33809494,33809672-33809741,33810839-33811206
Length = 959
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +3
Query: 93 LSLVSISVMSPQQTVQELFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKR 254
+ ++S+ + +P+ T+QEL F T++ ++GI E K G+G V R
Sbjct: 268 VDVLSVMIENPEATLQELLECMPGPDFPTGGTIVGNQGILEAYK-TGRGRVVMR 320
>09_04_0198 +
15528576-15528645,15528746-15528893,15529182-15529377,
15529512-15529604,15530403-15530462,15530563-15530637,
15531072-15531152,15531262-15531603,15531967-15531999
Length = 365
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = -3
Query: 662 GSPVPD--DHQALVPVQFLQSSHH*AFATRSRCWLVFIETSVFTIEIKLESISEDVDSWD 489
G+ +P+ + + V+ + S H ++ S CW+ + S++ + + + ++V SWD
Sbjct: 206 GAAIPNWLEVDGALAVESIHFSEH-FISSLSDCWMHVKKQSLYASADEFQDLVKEVLSWD 264
Query: 488 V*SLRDR 468
+ SL R
Sbjct: 265 IRSLSQR 271
>08_01_0998 - 10136050-10138356
Length = 768
Score = 29.1 bits (62), Expect = 3.8
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = -1
Query: 400 TNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLFFNASWNV---ILPPIASAVSLLTSSPFP 230
T +++ G+ L+ N+ N I L + S F N S N I+P + +L S F
Sbjct: 571 TVALMAGIDLSSNYLSNE-IPSELCNLESMRFLNLSRNHLSGIIPKEIGNLKILESLDFS 629
Query: 229 QNLASSSMPSSCMTVESTS 173
N S S+PSS + S S
Sbjct: 630 WNELSGSIPSSISNLMSLS 648
>07_02_0009 -
11716174-11716435,11716837-11717459,11718385-11718469,
11719346-11719374
Length = 332
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 709 PRKPMKPSAGGLASASVAPSPTITRRWYPCSS 614
P+ P+A A+A P+P T +W+PC S
Sbjct: 297 PKVEATPAAA--ATAPAPPAPPATTKWFPCCS 326
>03_02_0254 +
6862762-6863663,6863994-6864241,6864323-6864465,
6864532-6864570,6865403-6865501
Length = 476
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -1
Query: 730 FVTHPRYPRKPMKPSAGGLASASVAPSPTITRRWYP 623
+V R+P P + GL S PSP TR +P
Sbjct: 370 YVVSFRWPNLPQMEGSSGLGSKLKKPSPAATRDMFP 405
>02_01_0567 -
4168164-4168250,4168672-4168828,4168951-4169090,
4170318-4170456,4170562-4170830,4170914-4171000,
4171259-4171327,4171427-4171455,4171544-4171950,
4172906-4172977,4173150-4173221,4173299-4173370,
4173454-4173519,4173717-4173785,4173866-4173995,
4174846-4174975
Length = 664
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = -1
Query: 319 MSSLFFNASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSA 155
+SS F+ S L ++S +L +PF ++A S+ PSS T ST QT S+
Sbjct: 182 ISSNNFSGSLPPSLGSLSSLTTLKDGNPFNTSIAPSASPSSTPT-GSTPTQTPSS 235
>09_02_0456 - 9525067-9525422,9525679-9528226
Length = 967
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = -1
Query: 541 SPLK*NLSRLAKMLIVGMFSLSATGSIRLLNPPETRYTMTPLSCNSFTNSVIPGV 377
SPL NL LA + ++ + + S TGSI T LS N+ T + P +
Sbjct: 192 SPLPDNLGDLAALRVLFLANCSLTGSIPPSVGKLTNLVDLDLSSNNLTGEIPPSI 246
>02_05_0767 +
31609773-31610174,31610409-31610501,31610608-31610668,
31610797-31610865,31611274-31611440
Length = 263
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 277 PPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSA 155
PPI+S++SL+ S+P P + P +TV + S + S+
Sbjct: 4 PPISSSLSLMASNPIPS--PPVAKPGRPLTVAACSNSSSSS 42
>02_02_0109 + 6830802-6833412,6833491-6833861
Length = 993
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 411 HERGVIVYLVSGGFRSLIEPVAERLNIPTINIFANRL 521
H++ +YL + GF IEP LN+ I++ +N L
Sbjct: 266 HKKLQNLYLYANGFTGEIEPNVSALNLVEIDVSSNEL 302
>01_06_0768 -
31829753-31829851,31830454-31830593,31830729-31830818,
31830905-31831059,31831598-31831663,31831862-31831931,
31832299-31832429,31832516-31832702,31832828-31832894
Length = 334
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 381 PGITELVKELHERGVIVYLVSGGFRSLIE 467
PG+ LVK LH GV + L S R I+
Sbjct: 93 PGVERLVKHLHRNGVPLALASNSVRRNID 121
>08_02_0657 - 19749835-19751942,19753123-19753561
Length = 848
Score = 27.9 bits (59), Expect = 8.7
Identities = 22/80 (27%), Positives = 41/80 (51%)
Frame = +3
Query: 225 FCGKGDEVKRLTAEAMGGNMTFQEALKKRLDIIRPNVGQIREFIEKFPVRLTPGITELVK 404
FC +GD VKR E + G + + + +R + QIRE +E P+R P + + +
Sbjct: 194 FCDEGDPVKREDEERLDG-PGYDD-----VGGVRKQLAQIRELVE-LPLR-HPKLFQTLG 245
Query: 405 ELHERGVIVYLVSGGFRSLI 464
+G+++Y G ++L+
Sbjct: 246 VRPPKGILLYGPPGTGKTLL 265
>07_01_0989 +
8348706-8348882,8348988-8349028,8350071-8350120,
8350502-8350646,8351570-8351626,8352141-8352261,
8352436-8352945,8353242-8353289
Length = 382
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -1
Query: 718 PRYPRKPMKPSAGGLASASVAPSPTITRRWYPCSSFSRLTTKPLPPDLDVGSFSSKPAYS 539
P++PR +P + L P PT + P + +P PP S +S P YS
Sbjct: 297 PQHPRITQQPHSAPLLQPF--PLPTAS----PSPPYGTPLLQPFPPPNPSPSLASAPVYS 350
Query: 538 PL 533
P+
Sbjct: 351 PV 352
>03_05_0056 -
20349217-20349484,20349563-20350032,20350049-20350424,
20350546-20350568
Length = 378
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +3
Query: 582 GGKGLVVRRLKELHGYQRL-VIVGDGATDAEASPPA 686
GG G RR K HG+ L + D +ASPPA
Sbjct: 230 GGSGKKRRRCKRCHGFGHLQKTCNEPVYDPDASPPA 265
>02_05_0712 +
31130650-31130786,31130927-31130980,31131076-31131249,
31131425-31131530,31131646-31131687,31131768-31131824,
31132410-31132850
Length = 336
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 712 YPRKPMKPSAGGLASASVAPSPTI 641
+P P AGGL A+ APSPT+
Sbjct: 218 HPSSAAFPGAGGLQDAAWAPSPTM 241
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,306,554
Number of Sequences: 37544
Number of extensions: 401449
Number of successful extensions: 1615
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1614
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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