Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0212
(730 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55851| Best HMM Match : Hydrolase (HMM E-Value=0.95) 58 1e-08
SB_56087| Best HMM Match : Extensin_2 (HMM E-Value=0.29) 30 2.2
SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_36190| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89) 29 5.1
SB_27497| Best HMM Match : Death (HMM E-Value=0.028) 28 6.7
SB_16004| Best HMM Match : efhand (HMM E-Value=1.7) 28 6.7
SB_40415| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_58912| Best HMM Match : rve (HMM E-Value=2.2e-17) 28 8.9
SB_56221| Best HMM Match : AOX (HMM E-Value=3.6) 28 8.9
SB_55168| Best HMM Match : rve (HMM E-Value=2.2e-17) 28 8.9
SB_28953| Best HMM Match : rve (HMM E-Value=8.9e-07) 28 8.9
SB_28657| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_24087| Best HMM Match : rve (HMM E-Value=2.2e-17) 28 8.9
SB_2133| Best HMM Match : rve (HMM E-Value=2.2e-17) 28 8.9
SB_2115| Best HMM Match : rve (HMM E-Value=0.091) 28 8.9
SB_51094| Best HMM Match : VWA (HMM E-Value=0) 28 8.9
SB_44752| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_41308| Best HMM Match : rve (HMM E-Value=6e-12) 28 8.9
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
>SB_55851| Best HMM Match : Hydrolase (HMM E-Value=0.95)
Length = 209
Score = 57.6 bits (133), Expect = 1e-08
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = +3
Query: 144 LFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEV 248
++++AD VCFDVDSTV+ E IDELA FCG+G+EV
Sbjct: 12 IWKSADAVCFDVDSTVVTGEAIDELASFCGRGEEV 46
Score = 52.4 bits (120), Expect = 4e-07
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +3
Query: 408 LHERGVIVYLVSGGFRSLIEPVAERLNIPTINIFANRLKFYFN 536
L G VYLVSGGF+S++EP+A+ L IP N+FAN++ F N
Sbjct: 62 LLSHGTQVYLVSGGFQSILEPIAKDLGIPKTNVFANKILFNSN 104
>SB_56087| Best HMM Match : Extensin_2 (HMM E-Value=0.29)
Length = 403
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -1
Query: 718 PRYPRKPMKPSAGGLASASVAPSPTITRRWYPCSSFSRLTTKPLPPDLDVG-SFSSKP 548
P YP KP+ L+ S+ SP+ YP F R+TT P L S+ KP
Sbjct: 64 PSYPYKPLPRIPTSLSLVSLQASPS-----YPYKPFPRITTSPSLVHLQASPSYPYKP 116
>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +3
Query: 279 NMTFQEALKKRLDIIRPNVGQIREFIEKFPVRLTP--GITELVKELHERGVIVYLVSGGF 452
+++F+E K L+ +R I ++ RLT I ELVK H RG+ ++ F
Sbjct: 928 SLSFEELKKSVLESLRQEPAPIPPEVQHGWWRLTEPSNIKELVKACHSRGIREKMLQKNF 987
Query: 453 RSLIEPVAERLNIP 494
+ E ++ P
Sbjct: 988 QKYSEYISSSCKKP 1001
>SB_36190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 993
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -3
Query: 368 WKFLNEFSDLTDVRPDDVQSLLQRFLE 288
WK + EF + ++R D+ LL RF+E
Sbjct: 615 WKAMAEFPGVVEIRSRDIVPLLLRFIE 641
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1
Query: 265 SAVSLLTSSPFPQNLASSSMPSSCMTVES-TSKQTQSAVLNNSWTVC 128
SAV+ SP P NL + S TV+S +Q++++ + +S ++C
Sbjct: 3389 SAVNSREGSPLPTNLEIGNASKSVSTVKSEEQEQSEASCVQSSSSIC 3435
>SB_16018| Best HMM Match : Antimicrobial18 (HMM E-Value=0.89)
Length = 1494
Score = 28.7 bits (61), Expect = 5.1
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 12/159 (7%)
Frame = -1
Query: 619 SSFSRLTTKPLPPDLDVGSFSSKPAYSPLK*NLSRLAKMLIVGMFSLSATGSIRLLNPPE 440
+S S L+ P P L +S S + S L+ L S S + + +
Sbjct: 459 TSSSSLSVFPTPSSLPSDFLTSSSLPSDFLTSSSSLSDFLTS---SSSLSDFLTSSSSLS 515
Query: 439 TRYTMTPLSCNSFTNSVIPGVSLTGNFSMNSLI*PTLGLMMS---------SLFF--NAS 293
YT + L + T+S +P LT + S++ + TL ++S S+F ++S
Sbjct: 516 VFYTSSSLPSDFLTSSSLPSDFLTSSSSLSDFL--TLSSLLSDFLTSSSSLSVFLTSSSS 573
Query: 292 WNVILPPIASAVSLLTSSP-FPQNLASSSMPSSCMTVES 179
+V L +S LTSS L SSS+PS +T S
Sbjct: 574 LSVFLTSSSSLSDFLTSSSSLSVFLTSSSLPSDFLTSSS 612
>SB_27497| Best HMM Match : Death (HMM E-Value=0.028)
Length = 892
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 327 PNVGQIREFIEKFPVRLTPGITEL-VKELHERGVIVYLVSGGFRSLIEPVAERL 485
P VG++RE I + +L + ++ L V+ L+ GF S+ P AER+
Sbjct: 342 PQVGKLRENIHEIAQKLLQVREPIPIRWLQFEKVVASLIEKGFNSIKLPEAERI 395
>SB_16004| Best HMM Match : efhand (HMM E-Value=1.7)
Length = 201
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 6 EPCVKNMYIYVIKTITPLKSNLQYATLKTLSLVSIS 113
+PC N YI V +TI P +N + +T+ S S
Sbjct: 162 KPCSNNAYISVYRTIKPCSNNAYISVNRTIKPCSNS 197
>SB_40415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = -1
Query: 274 PIASAVSLLTSSPFP-QNLASSSMPSSCMTVESTSKQTQSAVLNNSWT 134
P+A + SL +SS + + LAS S SC +VE++++ NNS++
Sbjct: 886 PLAPSTSLTSSSAYSTEGLASGSESGSCPSVEASAEAKDCD--NNSYS 931
>SB_58912| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 511
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -1
Query: 715 RYPRKPMKPSAGGLA-SASVAPSPTITRRWYPCSSFSRLTTKPLPPDLDVGSFSSKPAYS 539
+ P+ S G++ PSP +TR P + + T PP+ + GS + S
Sbjct: 420 KLPKGTATTSPTGISVETPTRPSPPLTRDTGPGTGTTGSDTPTRPPETEPGSAEASEPVS 479
Query: 538 PLK 530
P K
Sbjct: 480 PAK 482
>SB_56221| Best HMM Match : AOX (HMM E-Value=3.6)
Length = 361
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -1
Query: 715 RYPRKPMKPSAGGLA-SASVAPSPTITRRWYPCSSFSRLTTKPLPPDLDVGSFSSKPAYS 539
+ P+ S G++ PSP +TR P + + T PP+ + GS + S
Sbjct: 270 KLPKGTATTSPTGISVETPTRPSPPLTRDTGPGTGTTGSDTPTRPPETEPGSAEASEPVS 329
Query: 538 PLK 530
P K
Sbjct: 330 PAK 332
>SB_55168| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1017
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -1
Query: 715 RYPRKPMKPSAGGLA-SASVAPSPTITRRWYPCSSFSRLTTKPLPPDLDVGSFSSKPAYS 539
+ P+ S G++ PSP +TR P + + T PP+ + GS + S
Sbjct: 926 KLPKGTATTSPTGISVETPTRPSPPLTRDTGPGTGTTGSDTPTRPPETEPGSAEASEPVS 985
Query: 538 PLK 530
P K
Sbjct: 986 PAK 988
>SB_28953| Best HMM Match : rve (HMM E-Value=8.9e-07)
Length = 555
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -1
Query: 715 RYPRKPMKPSAGGLA-SASVAPSPTITRRWYPCSSFSRLTTKPLPPDLDVGSFSSKPAYS 539
+ P+ S G++ PSP +TR P + + T PP+ + GS + S
Sbjct: 464 KLPKGTATTSPTGISVETPTRPSPPLTRDTGPGTGTTGSDTPTRPPETEPGSAEASEPVS 523
Query: 538 PLK 530
P K
Sbjct: 524 PAK 526
>SB_28657| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3296
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 366 PVRLTPGITELVKELHERGVIVYLVSGGFRSLIEP 470
P RLTP + E V L GV+ + R L+EP
Sbjct: 3146 PFRLTPNMAEFVTPLGVSGVMSASMVAAARCLVEP 3180
>SB_24087| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 1229
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -1
Query: 715 RYPRKPMKPSAGGLA-SASVAPSPTITRRWYPCSSFSRLTTKPLPPDLDVGSFSSKPAYS 539
+ P+ S G++ PSP +TR P + + T PP+ + GS + S
Sbjct: 1138 KLPKGTATTSPTGISVETPTRPSPPLTRDTGPGTGTTGSDTPTRPPETEPGSAEASEPVS 1197
Query: 538 PLK 530
P K
Sbjct: 1198 PAK 1200
>SB_2133| Best HMM Match : rve (HMM E-Value=2.2e-17)
Length = 425
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -1
Query: 715 RYPRKPMKPSAGGLA-SASVAPSPTITRRWYPCSSFSRLTTKPLPPDLDVGSFSSKPAYS 539
+ P+ S G++ PSP +TR P + + T PP+ + GS + S
Sbjct: 334 KLPKGTATTSPTGISVETPTRPSPPLTRDTGPGTGTTGSDTPTRPPETEPGSAEASEPVS 393
Query: 538 PLK 530
P K
Sbjct: 394 PAK 396
>SB_2115| Best HMM Match : rve (HMM E-Value=0.091)
Length = 345
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -1
Query: 715 RYPRKPMKPSAGGLA-SASVAPSPTITRRWYPCSSFSRLTTKPLPPDLDVGSFSSKPAYS 539
+ P+ S G++ PSP +TR P + + T PP+ + GS + S
Sbjct: 254 KLPKGTATTSPTGISVETPTRPSPPLTRDTGPGTDTTGSDTPTRPPETEPGSAEASEPVS 313
Query: 538 PLK 530
P K
Sbjct: 314 PAK 316
>SB_51094| Best HMM Match : VWA (HMM E-Value=0)
Length = 3544
Score = 27.9 bits (59), Expect = 8.9
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Frame = +3
Query: 240 DEVKRLTAEAMGGNMTFQEALKKRLDIIRPNVGQIREFIEKFPVRLTPG--------ITE 395
+EV + +++ GN +EAL I+ N R+ K V +T + +
Sbjct: 2317 EEVNKAIRQSLSGNSNLEEALTNAKKIL--NTPNTRKSSRKAVVIITDNTSGKTPTVLKD 2374
Query: 396 LVKELHERGVIVYLVSGG 449
K LHE+G+IV VS G
Sbjct: 2375 TAKPLHEQGIIV--VSSG 2390
>SB_44752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 421
Score = 27.9 bits (59), Expect = 8.9
Identities = 26/107 (24%), Positives = 39/107 (36%), Gaps = 3/107 (2%)
Frame = -1
Query: 706 RKPMKPSAGGLASASVAPSP---TITRRWYPCSSFSRLTTKPLPPDLDVGSFSSKPAYSP 536
R PM P+ GG A V P + + +R + P P DLD Y
Sbjct: 262 RSPMSPAGGGPGDAFVPPQTNGGVVVSGYSTFPRAARPASYPTPADLDDIQIPDSMKYGG 321
Query: 535 LK*NLSRLAKMLIVGMFSLSATGSIRLLNPPETRYTMTPLSCNSFTN 395
N+ R++ G + G + N +T Y L+ S T+
Sbjct: 322 SSNNVFRVSG---PGFGKSQSLGRLGTSNDSQTEYNRGRLARISLTD 365
>SB_41308| Best HMM Match : rve (HMM E-Value=6e-12)
Length = 581
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -1
Query: 715 RYPRKPMKPSAGGLA-SASVAPSPTITRRWYPCSSFSRLTTKPLPPDLDVGSFSSKPAYS 539
+ P+ S G++ PSP +TR P + + T PP+ + GS + S
Sbjct: 490 KLPKGTATTSPTGISVETPTRPSPPLTRDTGPGTGTTGSDTPTRPPETEPGSAEASEPVS 549
Query: 538 PLK 530
P K
Sbjct: 550 PAK 552
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -1
Query: 700 PMKPSAGGLASASVAPSPTITRRWYPCSSFSRLTTKPLPPDLDVGSFSSKPAYSPLK 530
P+KPS ++ + PSP+ T P S S +T P+ P P+ +P+K
Sbjct: 1263 PIKPSPSTTSTTPIKPSPS-TNPIKP--SPSTTSTTPIKPSPSTTPIKPSPSTTPIK 1316
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,314,767
Number of Sequences: 59808
Number of extensions: 425883
Number of successful extensions: 1700
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1697
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1949964354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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