Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0212
(730 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132865-9|CAB60608.2| 276|Caenorhabditis elegans Hypothetical ... 209 1e-54
AL132865-10|CAB60607.2| 279|Caenorhabditis elegans Hypothetical... 208 2e-54
AL132865-18|CAJ76950.1| 282|Caenorhabditis elegans Hypothetical... 203 9e-53
AL132865-11|CAC42380.2| 265|Caenorhabditis elegans Hypothetical... 203 9e-53
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 31 0.84
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 29 3.4
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 29 3.4
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 3.4
U38377-3|AAA79748.1| 652|Caenorhabditis elegans Cohesin family ... 28 5.9
U97014-1|AAB52425.1| 893|Caenorhabditis elegans Hypothetical pr... 28 7.9
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei... 28 7.9
AL021346-2|CAB63233.1| 419|Caenorhabditis elegans Hypothetical ... 28 7.9
AC024805-10|AAK39342.3| 1058|Caenorhabditis elegans Hypothetical... 28 7.9
>AL132865-9|CAB60608.2| 276|Caenorhabditis elegans Hypothetical
protein Y62E10A.13a protein.
Length = 276
Score = 209 bits (511), Expect = 1e-54
Identities = 114/234 (48%), Positives = 151/234 (64%), Gaps = 5/234 (2%)
Frame = +3
Query: 24 MYIYV-IKTITPLKSNLQYATLKTLSLVSISVMSPQQTVQELFRTADCVCFDVDSTVIQD 200
+Y Y+ I+ P ++ ++ T +IS + ++ V+ ++R AD VCFDVDSTV QD
Sbjct: 9 IYAYLMIRVALPTTASAIPRSISTSPGETIS-KNHEEEVKRVWRKADAVCFDVDSTVCQD 67
Query: 201 EGIDELAKFCGKGDEVKRLTAEAMGGNMTFQEALKKRLDIIRPNVGQIREFIEKFPVRLT 380
EGIDELA + G G+ V +T AM GN F++AL RL +++PN Q+ +F+ +LT
Sbjct: 68 EGIDELAAYLGVGEAVANVTRTAMNGNARFRDALAARLQVMKPNHEQLEQFVNISKPKLT 127
Query: 381 PGITELVKELHERGVIVYLVSGGFRSLIEPVAERLNIPTINIFANRLKFYFNGEYAGFDE 560
GI ELV LH RG VYLVSGGFR LI PVAE L I I+AN + F G+Y GFD
Sbjct: 128 VGIRELVSRLHARGTHVYLVSGGFRRLILPVAELLGIEKSRIYANEILFDKFGKYHGFDT 187
Query: 561 NEPTSRSG----GKGLVVRRLKELHGYQRLVIVGDGATDAEASPPADGFIGFRG 710
+E TS SG GK V+ LK+++ Y+ +V+VGDGATD EASPPAD FIGF G
Sbjct: 188 SELTSDSGSKETGKPAVIALLKKMYNYKTVVMVGDGATDVEASPPADAFIGFGG 241
>AL132865-10|CAB60607.2| 279|Caenorhabditis elegans Hypothetical
protein Y62E10A.13b protein.
Length = 279
Score = 208 bits (509), Expect = 2e-54
Identities = 107/199 (53%), Positives = 135/199 (67%), Gaps = 4/199 (2%)
Frame = +3
Query: 126 QQTVQELFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQEALK 305
++ V+ ++R AD VCFDVDSTV QDEGIDELA + G G+ V +T AM GN F++AL
Sbjct: 46 EEEVKRVWRKADAVCFDVDSTVCQDEGIDELAAYLGVGEAVANVTRTAMNGNARFRDALA 105
Query: 306 KRLDIIRPNVGQIREFIEKFPVRLTPGITELVKELHERGVIVYLVSGGFRSLIEPVAERL 485
RL +++PN Q+ +F+ +LT GI ELV LH RG VYLVSGGFR LI PVAE L
Sbjct: 106 ARLQVMKPNHEQLEQFVNISKPKLTVGIRELVSRLHARGTHVYLVSGGFRRLILPVAELL 165
Query: 486 NIPTINIFANRLKFYFNGEYAGFDENEPTSRSG----GKGLVVRRLKELHGYQRLVIVGD 653
I I+AN + F G+Y GFD +E TS SG GK V+ LK+++ Y+ +V+VGD
Sbjct: 166 GIEKSRIYANEILFDKFGKYHGFDTSELTSDSGSKETGKPAVIALLKKMYNYKTVVMVGD 225
Query: 654 GATDAEASPPADGFIGFRG 710
GATD EASPPAD FIGF G
Sbjct: 226 GATDVEASPPADAFIGFGG 244
>AL132865-18|CAJ76950.1| 282|Caenorhabditis elegans Hypothetical
protein Y62E10A.13d protein.
Length = 282
Score = 203 bits (496), Expect = 9e-53
Identities = 107/201 (53%), Positives = 135/201 (67%), Gaps = 6/201 (2%)
Frame = +3
Query: 126 QQTVQELFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQ--EA 299
++ V+ ++R AD VCFDVDSTV QDEGIDELA + G G+ V +T AM GN F+ +A
Sbjct: 47 EEEVKRVWRKADAVCFDVDSTVCQDEGIDELAAYLGVGEAVANVTRTAMNGNARFRYRDA 106
Query: 300 LKKRLDIIRPNVGQIREFIEKFPVRLTPGITELVKELHERGVIVYLVSGGFRSLIEPVAE 479
L RL +++PN Q+ +F+ +LT GI ELV LH RG VYLVSGGFR LI PVAE
Sbjct: 107 LAARLQVMKPNHEQLEQFVNISKPKLTVGIRELVSRLHARGTHVYLVSGGFRRLILPVAE 166
Query: 480 RLNIPTINIFANRLKFYFNGEYAGFDENEPTSRSG----GKGLVVRRLKELHGYQRLVIV 647
L I I+AN + F G+Y GFD +E TS SG GK V+ LK+++ Y+ +V+V
Sbjct: 167 LLGIEKSRIYANEILFDKFGKYHGFDTSELTSDSGSKETGKPAVIALLKKMYNYKTVVMV 226
Query: 648 GDGATDAEASPPADGFIGFRG 710
GDGATD EASPPAD FIGF G
Sbjct: 227 GDGATDVEASPPADAFIGFGG 247
>AL132865-11|CAC42380.2| 265|Caenorhabditis elegans Hypothetical
protein Y62E10A.13c protein.
Length = 265
Score = 203 bits (496), Expect = 9e-53
Identities = 107/201 (53%), Positives = 135/201 (67%), Gaps = 6/201 (2%)
Frame = +3
Query: 126 QQTVQELFRTADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQ--EA 299
++ V+ ++R AD VCFDVDSTV QDEGIDELA + G G+ V +T AM GN F+ +A
Sbjct: 30 EEEVKRVWRKADAVCFDVDSTVCQDEGIDELAAYLGVGEAVANVTRTAMNGNARFRYRDA 89
Query: 300 LKKRLDIIRPNVGQIREFIEKFPVRLTPGITELVKELHERGVIVYLVSGGFRSLIEPVAE 479
L RL +++PN Q+ +F+ +LT GI ELV LH RG VYLVSGGFR LI PVAE
Sbjct: 90 LAARLQVMKPNHEQLEQFVNISKPKLTVGIRELVSRLHARGTHVYLVSGGFRRLILPVAE 149
Query: 480 RLNIPTINIFANRLKFYFNGEYAGFDENEPTSRSG----GKGLVVRRLKELHGYQRLVIV 647
L I I+AN + F G+Y GFD +E TS SG GK V+ LK+++ Y+ +V+V
Sbjct: 150 LLGIEKSRIYANEILFDKFGKYHGFDTSELTSDSGSKETGKPAVIALLKKMYNYKTVVMV 209
Query: 648 GDGATDAEASPPADGFIGFRG 710
GDGATD EASPPAD FIGF G
Sbjct: 210 GDGATDVEASPPADAFIGFGG 230
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 31.1 bits (67), Expect = 0.84
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = -1
Query: 244 SSPFPQNLASSS-MPSSCMTVESTSKQTQSAVLNNSWTVC*GDITLIDTSESVFNVAYCR 68
SSP L++SS +PS T +S Q QS V NNS + L T++ V +
Sbjct: 831 SSPSSTRLSNSSNIPSCFATPDSPDSQLQSFVSNNSDLDADTSVNLSITTDGVHLMMCVD 890
Query: 67 LLFKGVIVFITYM 29
+GV+V T++
Sbjct: 891 KAAQGVVVEATHV 903
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 31.1 bits (67), Expect = 0.84
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = -1
Query: 244 SSPFPQNLASSS-MPSSCMTVESTSKQTQSAVLNNSWTVC*GDITLIDTSESVFNVAYCR 68
SSP L++SS +PS T +S Q QS V NNS + L T++ V +
Sbjct: 831 SSPSSTRLSNSSNIPSCFATPDSPDSQLQSFVSNNSDLDADTSVNLSITTDGVHLMMCVD 890
Query: 67 LLFKGVIVFITYM 29
+GV+V T++
Sbjct: 891 KAAQGVVVEATHV 903
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 29.1 bits (62), Expect = 3.4
Identities = 30/111 (27%), Positives = 44/111 (39%)
Frame = -1
Query: 484 SLSATGSIRLLNPPETRYTMTPLSCNSFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLF 305
S + TGS + PE +P T SV V+ S +LG ++
Sbjct: 421 SSTPTGSSQSTITPEGSTASSPTGSTGSTFSVATEVTSQSTVPSGS----SLGTQSTNSS 476
Query: 304 FNASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV 152
+ S L P S +S LTS P P + SS S+ T Q+ S++
Sbjct: 477 PSPS---SLSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQSTSSL 524
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 29.1 bits (62), Expect = 3.4
Identities = 30/111 (27%), Positives = 44/111 (39%)
Frame = -1
Query: 484 SLSATGSIRLLNPPETRYTMTPLSCNSFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLF 305
S + TGS + PE +P T SV V+ S +LG ++
Sbjct: 628 SSTPTGSSQSTITPEGSTASSPTGSTGSTFSVATEVTSQSTVPSGS----SLGTQSTNSS 683
Query: 304 FNASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV 152
+ S L P S +S LTS P P + SS S+ T Q+ S++
Sbjct: 684 PSPS---SLSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQSTSSL 731
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 29.1 bits (62), Expect = 3.4
Identities = 30/111 (27%), Positives = 44/111 (39%)
Frame = -1
Query: 484 SLSATGSIRLLNPPETRYTMTPLSCNSFTNSVIPGVSLTGNFSMNSLI*PTLGLMMSSLF 305
S + TGS + PE +P T SV V+ S +LG ++
Sbjct: 628 SSTPTGSSQSTITPEGSTASSPTGSTGSTFSVATEVTSQSTVPSGS----SLGTQSTNSS 683
Query: 304 FNASWNVILPPIASAVSLLTSSPFPQNLASSSMPSSCMTVESTSKQTQSAV 152
+ S L P S +S LTS P P + SS S+ T Q+ S++
Sbjct: 684 PSPS---SLSPSTSGMSTLTSEPSPSSTQSSGAQSTLTTPSPNPSQSTSSL 731
>U38377-3|AAA79748.1| 652|Caenorhabditis elegans Cohesin family
protein 1 protein.
Length = 652
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 240 DEVKRLTAEAMGGNMTFQEALKKRLDIIRPN 332
D+VK +T E M GNM + RLD+ P+
Sbjct: 385 DDVKMITGEEMKGNMADFSDILTRLDLAPPS 415
>U97014-1|AAB52425.1| 893|Caenorhabditis elegans Hypothetical
protein T05E8.1 protein.
Length = 893
Score = 27.9 bits (59), Expect = 7.9
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 5/88 (5%)
Frame = -3
Query: 713 LPPKANEAVSRWASLGIGSPVPDDHQALVPVQFLQSSHH*AFATRSRC----WLVFIETS 546
+PP NE W ++G V + Q VP ++H AF + R W F T
Sbjct: 737 VPPLENE----WNAVGPWI-VMNTRQTFVPKLGQHTAHDKAFEIQKRAETGTWKHFQYTD 791
Query: 545 VFTIEIKLESISEDVDSWDV*SL-RDRF 465
+ E+K + + + V W V S +D+F
Sbjct: 792 CYADELKPKDLDKHVKGWQVGSWDQDKF 819
>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
protein.
Length = 2427
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +3
Query: 177 VDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMTFQEALKKRLDIIRPNVGQIRE 350
+D+ + E L K KG+E+ R AEA G ++ +KKR++ + + GQIR+
Sbjct: 1766 IDTELASHEPQVSLVKL--KGEELLRSAAEAGVG----EDQIKKRMEDLEQSWGQIRD 1817
>AL021346-2|CAB63233.1| 419|Caenorhabditis elegans Hypothetical
protein H37A05.2 protein.
Length = 419
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +3
Query: 357 EKFPVRLTPGITELVKELHERGVIVYLVSGGFRSLIEPVAERLNIPTINIFA--NRLKFY 530
E + + +T LVKELH R V +Y + R +P +N+ ++ F + LK Y
Sbjct: 96 ETWDIEKMKSMTSLVKELHNREVDMYRII--MRE--KPACPTVNVLSLEAFTELSPLKAY 151
Query: 531 FNGEY 545
EY
Sbjct: 152 IISEY 156
>AC024805-10|AAK39342.3| 1058|Caenorhabditis elegans Hypothetical
protein Y51H7C.11 protein.
Length = 1058
Score = 27.9 bits (59), Expect = 7.9
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Frame = +3
Query: 153 TADCVCFDVDSTVIQDEGIDELAKFCGKGDEVKRLTAEAMGGNMT--FQEALKKRLDIIR 326
+AD V F VDS V D ++E ++ K L + N+T + E +KK L I
Sbjct: 295 SADDVEF-VDS-VEDDVDVEEYSQLFDVNLVWKNLN---LASNLTKNYMERMKKELTICY 349
Query: 327 PNVGQIRE----FIEKFPV--------RLTPGITELVKELHERGV 425
P +GQ+ FIEK PV RL I++L + L E G+
Sbjct: 350 PLLGQVYAFDPIFIEKLPVFAHYDHVARLHINISQLAEHLVEFGI 394
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,692,056
Number of Sequences: 27780
Number of extensions: 315407
Number of successful extensions: 1293
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1287
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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