Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0211
(331 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18003| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 1e-11
SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22) 29 1.2
SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.1
SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.8
SB_57234| Best HMM Match : Phage_fiber (HMM E-Value=4.5e-08) 27 2.8
SB_31903| Best HMM Match : Amino_oxidase (HMM E-Value=3.36312e-44) 27 2.8
SB_48741| Best HMM Match : ASC (HMM E-Value=4.9e-11) 27 3.7
SB_14934| Best HMM Match : ASC (HMM E-Value=1.8e-05) 27 3.7
SB_44545| Best HMM Match : ASC (HMM E-Value=4.8e-13) 27 3.7
SB_38475| Best HMM Match : ASC (HMM E-Value=3.1e-14) 27 3.7
SB_35796| Best HMM Match : ASC (HMM E-Value=7.4e-18) 27 3.7
SB_40301| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.9
SB_29737| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.5
>SB_18003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 65.3 bits (152), Expect = 1e-11
Identities = 27/41 (65%), Positives = 33/41 (80%)
Frame = +2
Query: 209 VPMKRIKFKTNLEHEYIQNFKILQAGFKKMGVDKIVPIDKL 331
VP+K++KF EHEYI NFKILQ+ FKK G DKI+P+DKL
Sbjct: 43 VPLKKVKFGAKQEHEYIANFKILQSAFKKCGCDKIIPVDKL 83
>SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22)
Length = 820
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 164 GAAYCQFMDMLFPGSVPMKRIKFKTNLE 247
G A C+ ++ L PG +P + K KTN E
Sbjct: 456 GMAICELVNALQPGLIPDSKYKEKTNSE 483
>SB_28495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6753
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +1
Query: 139 CEDRRVVYRCRLLPVH-GHAVPWQCTNEKNQI 231
C+D Y C+ P+H G W C ++K I
Sbjct: 3148 CQDLHGSYNCKCSPLHAGRDCQWGCLDQKANI 3179
>SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 27.5 bits (58), Expect = 2.8
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = -1
Query: 274 YFKVLYIFMFQICLKFDSFHWYTAREQHVHELAI 173
Y V Y+F+F L++ H++ E+ +H+ +
Sbjct: 595 YVMVCYVFVFCALLEYAVVHYFFVYEKQIHQFQL 628
>SB_57234| Best HMM Match : Phage_fiber (HMM E-Value=4.5e-08)
Length = 355
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -1
Query: 250 MFQICLKFDSFHWYTAREQHVHELAIGGTCTQLFDLR 140
+ + L+ D H+ R H+H LAI G ++R
Sbjct: 78 LHNLALRGDHLHYLAIRSDHLHYLAIRGDHLHYLEIR 114
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = -1
Query: 325 VNGYYLVHTHLFKTSL*YFKVLYIFMFQICLKFDSFHWYTAREQHVHELAIGG 167
+ G +L + + L Y + + + ++ D H+ R H+H LAI G
Sbjct: 23 IRGDHLHNLAIRGDQLHYLAIRGDHLHNLAIRGDHLHYLAIRGDHLHNLAIKG 75
Score = 26.2 bits (55), Expect = 6.5
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = -1
Query: 325 VNGYYLVHTHLFKTSL*YFKVLYIFMFQICLKFDSFHWYTAREQHVHELAIGG 167
+ G +L + + L Y + + + ++ D H+ R H+H LAI G
Sbjct: 213 IRGDHLHYLAIRGDHLHYLAIRGDHLHYLAIRGDHLHYLAIRGDHLHNLAIRG 265
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = -1
Query: 325 VNGYYLVHTHLFKTSL*YFKVLYIFMFQICLKFDSFHWYTAREQHVHELAIGG 167
+ G +L + + L Y + + + ++ D H+ R H+H LAI G
Sbjct: 263 IRGDHLHNLAIRGDHLHYLAIRGDHLHYLAIRGDHLHYLAIRGDHLHNLAIRG 315
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = -1
Query: 325 VNGYYLVHTHLFKTSL*YFKVLYIFMFQICLKFDSFHWYTAREQHVHELAIGG 167
+ G +L + + L Y + + + ++ D H+ R H+H LAI G
Sbjct: 283 IRGDHLHYLAIRGDHLHYLAIRGDHLHNLAIRGDHLHYLAIRGDHLHYLAIRG 335
>SB_31903| Best HMM Match : Amino_oxidase (HMM E-Value=3.36312e-44)
Length = 1021
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -2
Query: 189 SMNWQ*AAPVHNSS--IFAKFDWRQSFTHASISCRDRFSDVTFVEYTFTAIFTMYQPLIK 16
S W+ P++N+ F F+ + S S R D V + +FT+++PL
Sbjct: 710 SRGWRNDTPINNAIEYFFIDFESAKEPDIVSFSPLQRRLDDFLVLEPYDGLFTLFKPLYD 769
Query: 15 KFL 7
KF+
Sbjct: 770 KFI 772
>SB_48741| Best HMM Match : ASC (HMM E-Value=4.9e-11)
Length = 344
Score = 27.1 bits (57), Expect = 3.7
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = +2
Query: 119 DCLQSNFAKIEELCTGAAYCQFMDMLFPGSV----PMKRIKFKTNLEH-EYIQNFKILQA 283
+C +++F+ E L G+ + D F V P+ ++ + N+E +++ N LQA
Sbjct: 171 ECGKNSFSTFEHLRYGSCHTFNSDGQFGLKVDSIGPISGLQLRLNVEEKDHVSNLYGLQA 230
Query: 284 GFK 292
GFK
Sbjct: 231 GFK 233
>SB_14934| Best HMM Match : ASC (HMM E-Value=1.8e-05)
Length = 266
Score = 27.1 bits (57), Expect = 3.7
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = +2
Query: 119 DCLQSNFAKIEELCTGAAYCQFMDMLFPGSV----PMKRIKFKTNLEH-EYIQNFKILQA 283
+C +++F+ E L G+ + D F V P+ ++ + N+E +++ N LQA
Sbjct: 171 ECGKNSFSTFEHLRYGSCHTFNSDGQFGLKVDSIGPISGLQLRLNVEEKDHVSNLYGLQA 230
Query: 284 GFK 292
GFK
Sbjct: 231 GFK 233
>SB_44545| Best HMM Match : ASC (HMM E-Value=4.8e-13)
Length = 386
Score = 27.1 bits (57), Expect = 3.7
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = +2
Query: 119 DCLQSNFAKIEELCTGAAYCQFMDMLFPGSV----PMKRIKFKTNLEH-EYIQNFKILQA 283
+C +++F+ E L G+ + D F V P+ ++ + N+E +++ N LQA
Sbjct: 171 ECGKNSFSTFEHLRYGSCHTFNSDGQFGLKVDSIGPISGLQLRLNVEEKDHVSNLYGLQA 230
Query: 284 GFK 292
GFK
Sbjct: 231 GFK 233
>SB_38475| Best HMM Match : ASC (HMM E-Value=3.1e-14)
Length = 421
Score = 27.1 bits (57), Expect = 3.7
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = +2
Query: 119 DCLQSNFAKIEELCTGAAYCQFMDMLFPGSV----PMKRIKFKTNLEH-EYIQNFKILQA 283
+C +++F+ E L G+ + D F V P+ ++ + N+E +++ N LQA
Sbjct: 171 ECGKNSFSTFEHLRYGSCHTFNSDGQFGLKVDSIGPISGLQLRLNVEEKDHVSNLYGLQA 230
Query: 284 GFK 292
GFK
Sbjct: 231 GFK 233
>SB_35796| Best HMM Match : ASC (HMM E-Value=7.4e-18)
Length = 422
Score = 27.1 bits (57), Expect = 3.7
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = +2
Query: 119 DCLQSNFAKIEELCTGAAYCQFMDMLFPGSV----PMKRIKFKTNLEH-EYIQNFKILQA 283
+C +++F+ E L G+ + D F V P+ ++ + N+E +++ N LQA
Sbjct: 171 ECGKNSFSTFEHLRYGSCHTFNSDGQFGLKVDSIGPISGLQLRLNVEEKDHVSNLYGLQA 230
Query: 284 GFK 292
GFK
Sbjct: 231 GFK 233
>SB_40301| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2653
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 221 RIKFKTNLEHEYIQNFKILQAGFKKMGVDKIVPIDKL 331
+I+ K N+E E ++ IL F KMG D P DKL
Sbjct: 788 QIRPKHNMEPEKFESNPILFGDFMKMGAD---PADKL 821
>SB_29737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 26.2 bits (55), Expect = 6.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +3
Query: 183 SWTCCSLAVYQ*KESNLRQIW 245
+W C L+ Q KE LRQ W
Sbjct: 103 AWATCDLSSAQHKEPGLRQAW 123
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,655,899
Number of Sequences: 59808
Number of extensions: 209081
Number of successful extensions: 466
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 460
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 463065397
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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