Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0211
(331 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 125 9e-30
AL031269-2|CAA20332.1| 299|Caenorhabditis elegans Hypothetical ... 94 2e-20
Z81147-8|CAB03537.1| 338|Caenorhabditis elegans Hypothetical pr... 29 0.79
AF045641-4|AAO91715.1| 332|Caenorhabditis elegans Hypothetical ... 29 0.79
AF045641-3|AAO91716.1| 368|Caenorhabditis elegans Hypothetical ... 29 0.79
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ... 29 0.79
AF039710-3|AAD32272.1| 347|Caenorhabditis elegans Serpentine re... 29 0.79
AF039710-4|AAD32273.1| 347|Caenorhabditis elegans Serpentine re... 27 2.4
Z81062-10|CAB02940.1| 79|Caenorhabditis elegans Hypothetical p... 27 3.2
U39648-2|AAM15606.1| 166|Caenorhabditis elegans Hypothetical pr... 27 3.2
AF303270-1|AAG50228.1| 79|Caenorhabditis elegans 2M776 protein. 27 3.2
U97189-1|AAC48164.1| 623|Caenorhabditis elegans Hypothetical pr... 26 5.5
Z49969-4|CAA90268.1| 309|Caenorhabditis elegans Hypothetical pr... 26 7.3
AF016661-2|AAB66051.1| 246|Caenorhabditis elegans Hypothetical ... 26 7.3
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z78545-3|CAB01767.1| 306|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z19158-6|CAA79575.2| 615|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z19156-3|CAA79564.2| 615|Caenorhabditis elegans Hypothetical pr... 25 9.7
AF079899-1|AAC83661.1| 615|Caenorhabditis elegans sodium- and c... 25 9.7
>AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical
protein Y59A8B.7 protein.
Length = 316
Score = 125 bits (301), Expect = 9e-30
Identities = 50/94 (53%), Positives = 76/94 (80%)
Frame = +2
Query: 50 VNVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKRIK 229
VNVY+T +++NLSRH+ML WVNDCLQ++F KIE+L TGA YC F D LFP S+ +K++K
Sbjct: 6 VNVYTTASSADNLSRHEMLMWVNDCLQAHFTKIEQLHTGAGYCLFTDFLFPDSIQLKKVK 65
Query: 230 FKTNLEHEYIQNFKILQAGFKKMGVDKIVPIDKL 331
+ + LE +++ N+K++Q +K +GV+K++P+DKL
Sbjct: 66 WNSRLELDWLSNWKLVQTTWKNLGVEKVIPVDKL 99
>AL031269-2|CAA20332.1| 299|Caenorhabditis elegans Hypothetical
protein VW02B12L.3 protein.
Length = 299
Score = 94.3 bits (224), Expect = 2e-20
Identities = 40/96 (41%), Positives = 68/96 (70%)
Frame = +2
Query: 44 MAVNVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKR 223
M VNV+ + VT++ LSR + +AWVN+ L+S+F K+EE+ +GAAYCQ +LF ++ +K+
Sbjct: 1 MVVNVFISAVTTDTLSRKEAVAWVNNLLKSHFTKVEEMASGAAYCQLTHLLF-NAINLKK 59
Query: 224 IKFKTNLEHEYIQNFKILQAGFKKMGVDKIVPIDKL 331
+KF E + + N+K+L +K +G+DK V ++K+
Sbjct: 60 VKFNPRSEPDVLNNWKVLTTTWKDLGIDKPVDVEKM 95
>Z81147-8|CAB03537.1| 338|Caenorhabditis elegans Hypothetical
protein T09E11.10 protein.
Length = 338
Score = 29.1 bits (62), Expect = 0.79
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = +2
Query: 185 MDMLFPGSVPMKR-IKFKTNL---EHEYIQNFKILQAGFKK 295
M M+F G P K I F +++ +HEY++ ++I A FK+
Sbjct: 288 MTMMFMGYEPTKEPILFSSHIPLKDHEYLEQYRIQMADFKE 328
>AF045641-4|AAO91715.1| 332|Caenorhabditis elegans Hypothetical
protein F53H1.4b protein.
Length = 332
Score = 29.1 bits (62), Expect = 0.79
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Frame = +2
Query: 44 MAVNVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKR 223
+A+ VYS V + NLS D+L + D + F E+L + + G + +
Sbjct: 17 LAIEVYS-KVHNSNLSEDDLLDEIEDLIDEKFFAGEKLMSSGKEYTVVSSEKRGGLTLYT 75
Query: 224 IKFKTNLEHEYIQNFKILQA-GFKKMGVDKIVPIDK 328
++ T + H ++ K L KK+ ++ +D+
Sbjct: 76 MEDGTKIGHRDLRRKKGLSVEEIKKIAIEDAEFVDE 111
>AF045641-3|AAO91716.1| 368|Caenorhabditis elegans Hypothetical
protein F53H1.4c protein.
Length = 368
Score = 29.1 bits (62), Expect = 0.79
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Frame = +2
Query: 44 MAVNVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKR 223
+A+ VYS V + NLS D+L + D + F E+L + + G + +
Sbjct: 53 LAIEVYS-KVHNSNLSEDDLLDEIEDLIDEKFFAGEKLMSSGKEYTVVSSEKRGGLTLYT 111
Query: 224 IKFKTNLEHEYIQNFKILQA-GFKKMGVDKIVPIDK 328
++ T + H ++ K L KK+ ++ +D+
Sbjct: 112 MEDGTKIGHRDLRRKKGLSVEEIKKIAIEDAEFVDE 147
>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
protein F53H1.4a protein.
Length = 1370
Score = 29.1 bits (62), Expect = 0.79
Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Frame = +2
Query: 44 MAVNVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKR 223
+A+ VYS V + NLS D+L + D + F E+L + + G + +
Sbjct: 53 LAIEVYS-KVHNSNLSEDDLLDEIEDLIDEKFFAGEKLMSSGKEYTVVSSEKRGGLTLYT 111
Query: 224 IKFKTNLEHEYIQNFKILQA-GFKKMGVDKIVPIDK 328
++ T + H ++ K L KK+ ++ +D+
Sbjct: 112 MEDGTKIGHRDLRRKKGLSVEEIKKIAIEDAEFVDE 147
>AF039710-3|AAD32272.1| 347|Caenorhabditis elegans Serpentine
receptor, class h protein100 protein.
Length = 347
Score = 29.1 bits (62), Expect = 0.79
Identities = 21/79 (26%), Positives = 33/79 (41%)
Frame = +2
Query: 53 NVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKRIKF 232
N YSTN + NLS + +W ++F +I L F +L V MK +K+
Sbjct: 7 NYYSTNYSKCNLSESFLASWKGVAYPTDFIQIFSL--PLQILAFYIILTKTPVQMKSMKW 64
Query: 233 KTNLEHEYIQNFKILQAGF 289
H + F ++ F
Sbjct: 65 PLFYNHLFCSIFDVILCTF 83
>AF039710-4|AAD32273.1| 347|Caenorhabditis elegans Serpentine
receptor, class h protein99 protein.
Length = 347
Score = 27.5 bits (58), Expect = 2.4
Identities = 20/79 (25%), Positives = 32/79 (40%)
Frame = +2
Query: 53 NVYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAAYCQFMDMLFPGSVPMKRIKF 232
N YSTN + NLS + +W ++ +I L F +L V MK +K+
Sbjct: 7 NYYSTNYSKCNLSESFLASWKGVAYPTDIIQIFSL--PLQILAFFIILAKSPVQMKSMKW 64
Query: 233 KTNLEHEYIQNFKILQAGF 289
H + F ++ F
Sbjct: 65 PLFYNHLFCSIFDLILCTF 83
>Z81062-10|CAB02940.1| 79|Caenorhabditis elegans Hypothetical
protein F15A4.10 protein.
Length = 79
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 92 RHDMLAWVNDCLQSNFAKIEELC 160
R D L W D LQ N A+ +E+C
Sbjct: 31 RIDALLWEVDTLQKNIAETKEMC 53
>U39648-2|AAM15606.1| 166|Caenorhabditis elegans Hypothetical
protein T13C5.7 protein.
Length = 166
Score = 27.1 bits (57), Expect = 3.2
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = -2
Query: 324 SMGTILST-PIFLKPACNILKFCIYSCSKFVLNLILFIGTLPGNSMSMNWQ*AAPVHNSS 148
++G +L+ P +C+ + C + + L ILF TLPG S ++ W
Sbjct: 86 ALGAVLALFPFVPAGSCSTIVVCPPTTT---LQYILFGTTLPGPSPAVAWCEETGPDAGK 142
Query: 147 IFAKFDWRQSFTHASISC 94
+ W F AS++C
Sbjct: 143 WYTGVSWLLRFELASLAC 160
>AF303270-1|AAG50228.1| 79|Caenorhabditis elegans 2M776 protein.
Length = 79
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 92 RHDMLAWVNDCLQSNFAKIEELC 160
R D L W D LQ N A+ +E+C
Sbjct: 31 RIDALLWEVDTLQKNIAETKEMC 53
>U97189-1|AAC48164.1| 623|Caenorhabditis elegans Hypothetical
protein C48B6.4 protein.
Length = 623
Score = 26.2 bits (55), Expect = 5.5
Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 127 PVKLCEDRRVVYRCRLLPV-HGHAVPWQCTNE 219
P + C+ ++ RC+L+P +G V W C +
Sbjct: 315 PYRHCKIQKFAVRCKLVPENYGWYVVWHCQRD 346
>Z49969-4|CAA90268.1| 309|Caenorhabditis elegans Hypothetical
protein W01C9.4 protein.
Length = 309
Score = 25.8 bits (54), Expect = 7.3
Identities = 15/62 (24%), Positives = 29/62 (46%)
Frame = +2
Query: 134 NFAKIEELCTGAAYCQFMDMLFPGSVPMKRIKFKTNLEHEYIQNFKILQAGFKKMGVDKI 313
NF EL + AY +D++ G+ + K ++++ + + AG+ + G I
Sbjct: 115 NFIMATELLSSNAYGTIIDIVLKGTFNVTTELGKRCIQNKTGASITSITAGYARAGAPFI 174
Query: 314 VP 319
VP
Sbjct: 175 VP 176
>AF016661-2|AAB66051.1| 246|Caenorhabditis elegans Hypothetical
protein F02E11.3 protein.
Length = 246
Score = 25.8 bits (54), Expect = 7.3
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 56 VYSTNVTSENLSRHDMLAWVNDCLQSNFAKIEELCTGAA 172
+Y+TNVT E+L L ++N SNF + GAA
Sbjct: 124 IYNTNVTGEHL----WLCFLNSETSSNFCHNNGISDGAA 158
>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical protein
F25C8.3b protein.
Length = 3175
Score = 25.4 bits (53), Expect = 9.7
Identities = 7/17 (41%), Positives = 15/17 (88%)
Frame = +1
Query: 7 QEFFNQGLIHSKNGCKC 57
++FF+ G+++++NG KC
Sbjct: 1235 EDFFDDGIVNNQNGEKC 1251
>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical protein
F25C8.3a protein.
Length = 3184
Score = 25.4 bits (53), Expect = 9.7
Identities = 7/17 (41%), Positives = 15/17 (88%)
Frame = +1
Query: 7 QEFFNQGLIHSKNGCKC 57
++FF+ G+++++NG KC
Sbjct: 1235 EDFFDDGIVNNQNGEKC 1251
>Z78545-3|CAB01767.1| 306|Caenorhabditis elegans Hypothetical
protein M03B6.4 protein.
Length = 306
Score = 25.4 bits (53), Expect = 9.7
Identities = 7/14 (50%), Positives = 13/14 (92%)
Frame = +1
Query: 124 SPVKLCEDRRVVYR 165
SP +LC+D+R+++R
Sbjct: 132 SPKRLCQDKRIIFR 145
>Z19158-6|CAA79575.2| 615|Caenorhabditis elegans Hypothetical
protein T23G5.5 protein.
Length = 615
Score = 25.4 bits (53), Expect = 9.7
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -2
Query: 258 IYSCSKFVLNLILFIGTLPGNSMSMNWQ*AAP-VHNSSIFAKFDWRQSFTH 109
IY +FV ++ +G PGN W AAP + S I + F Q+ T+
Sbjct: 491 IYGLRQFVHDVKEMMGFRPGNYWKFCWSCAAPFILLSMITSNFINYQALTY 541
>Z19156-3|CAA79564.2| 615|Caenorhabditis elegans Hypothetical
protein T23G5.5 protein.
Length = 615
Score = 25.4 bits (53), Expect = 9.7
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -2
Query: 258 IYSCSKFVLNLILFIGTLPGNSMSMNWQ*AAP-VHNSSIFAKFDWRQSFTH 109
IY +FV ++ +G PGN W AAP + S I + F Q+ T+
Sbjct: 491 IYGLRQFVHDVKEMMGFRPGNYWKFCWSCAAPFILLSMITSNFINYQALTY 541
>AF079899-1|AAC83661.1| 615|Caenorhabditis elegans sodium- and
chloride-dependentantidepressant- and cocaine-sensitive
dopamine transporterprotein.
Length = 615
Score = 25.4 bits (53), Expect = 9.7
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -2
Query: 258 IYSCSKFVLNLILFIGTLPGNSMSMNWQ*AAP-VHNSSIFAKFDWRQSFTH 109
IY +FV ++ +G PGN W AAP + S I + F Q+ T+
Sbjct: 491 IYGLRQFVHDVKEMMGFRPGNYWKFCWSCAAPFILLSMITSNFINYQALTY 541
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,140,270
Number of Sequences: 27780
Number of extensions: 163836
Number of successful extensions: 489
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 488
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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