Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0211
         (331 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            21   2.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   2.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          20   6.7  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      20   6.7  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    20   6.7  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    20   8.9  

>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 80  ENLSRHDMLAWVNDC 124
           +NL+++ M+ W  DC
Sbjct: 13  KNLNQNQMMIWALDC 27


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 164 LYTTLRSSQSLTGDNH 117
           LY+  RSS+SLT   H
Sbjct: 53  LYSGTRSSESLTAQAH 68


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = +2

Query: 173 YCQFMDMLFPGSVPMKRIKFKTNLEHEYIQNFKIL 277
           Y  F+   FP  +P K          EY+ + K+L
Sbjct: 232 YYFFLRQAFPFWLPSKEYDLPDYRGEEYLYSHKLL 266


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = +2

Query: 173 YCQFMDMLFPGSVPMKRIKFKTNLEHEYIQNFKIL 277
           Y  F+   FP  +P K          EY+ + K+L
Sbjct: 232 YYFFLRQAFPFWLPSKEYDLPDYRGEEYLYSHKLL 266


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -1

Query: 319 GYYLVHTHL 293
           GYYL HT++
Sbjct: 245 GYYLFHTYI 253


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 58  YIYSHFYYV 32
           YI+SHF YV
Sbjct: 113 YIWSHFPYV 121


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,037
Number of Sequences: 438
Number of extensions: 1901
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7342137
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)