Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0210
(496 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0183 + 13543833-13544051,13544161-13544257,13545616-135457... 31 0.38
06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,805... 30 1.2
05_01_0473 - 3783379-3783783,3785149-3785173,3785498-3785511 30 1.2
05_01_0405 - 3191639-3192059,3192107-3192234,3192312-3192440,319... 29 2.1
10_08_0933 + 21661209-21662813 29 2.7
01_01_1062 + 8381281-8381490,8382353-8382449,8382546-8382637,838... 29 2.7
07_03_0457 - 18404577-18405193,18405317-18405563,18405734-184059... 28 3.6
01_01_0096 + 737928-739894,740164-740221 28 3.6
01_01_0093 + 727977-729854,729877-729930 28 3.6
09_04_0003 - 13577369-13578082,13579045-13579092 28 4.7
05_06_0020 + 24976990-24977167,24978763-24978874,24979634-249797... 28 4.7
02_04_0488 + 23397480-23397687,23397777-23397805,23398462-233985... 28 4.7
12_02_0689 + 22160627-22160720,22161331-22161425,22161679-221618... 27 6.3
11_06_0321 - 22341267-22342565 27 6.3
11_03_0131 + 10497674-10499617 27 6.3
08_02_0011 - 11234393-11235348,11235364-11235700 27 8.3
08_02_0004 + 11187587-11187923,11187939-11189861,11190195-11190391 27 8.3
>01_03_0183 +
13543833-13544051,13544161-13544257,13545616-13545707,
13545928-13546047,13546170-13546355,13546439-13546602,
13546691-13546769,13548256-13548387,13548560-13548687,
13548785-13549140,13549211-13549221,13549312-13549431,
13549510-13549637,13552210-13552260,13553105-13553189,
13553856-13553954,13555260-13555535
Length = 780
Score = 31.5 bits (68), Expect = 0.38
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -1
Query: 205 LVQHSQRAKQVVIVPAVRSFGNIKTAFTEETECV 104
LV+ VV++PA+R+ GNI T +T+C+
Sbjct: 288 LVELLSHPSPVVLIPALRTVGNIVTGDDAQTQCI 321
>06_01_1032 + 8055678-8055782,8055875-8055936,8057302-8057507,
8057595-8058314,8058404-8058603,8058988-8059172,
8059287-8059354,8059432-8060246,8060502-8060599,
8060702-8060887,8061358-8061538,8061651-8061812,
8061894-8061937,8062059-8062115,8062409-8062505,
8062614-8062786,8062868-8063081,8063270-8063395,
8064072-8064188,8064459-8064566,8064729-8064898,
8065049-8065127,8065211-8065285,8065845-8065942,
8066030-8066137,8066238-8066295,8066527-8066631,
8067461-8069516,8069804-8070697,8070896-8071852,
8072022-8072075,8072157-8072222,8072294-8073472,
8073868-8075598,8075764-8075829,8076763-8077788,
8077893-8078041
Length = 4264
Score = 29.9 bits (64), Expect = 1.2
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 8/98 (8%)
Frame = +2
Query: 74 DEYNANPQRGNAFSFLGKRGLDITKAANSGDDHHLFSSLGMLHECSPSMMSTADKSFYGT 253
++ N + G G + D+ DD HL ++L P+ + + G
Sbjct: 3362 EDGNGLQREGTTVDVTGSKEDDMEAEEKQMDDSHLPAALQSTESSQPTEHAAPTQDD-GN 3420
Query: 254 HEQCQ--------SNEDIFNCEEEIDENLERAPTSMLP 343
QC+ S EDI EE++ +++ +P+S LP
Sbjct: 3421 GLQCEGTTVDVSGSKEDIMEVEEKLIDDISGSPSSHLP 3458
>05_01_0473 - 3783379-3783783,3785149-3785173,3785498-3785511
Length = 147
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/61 (27%), Positives = 25/61 (40%)
Frame = +3
Query: 36 RKDIQSHNYKYPWTNTTLILREGTHSVSSVNAVLILPKLRTAGTITTCLARWECCTSAAP 215
R DI H Y+ P L +H +++ A LP T G +TT +S+
Sbjct: 64 RADIVRHKYRLPSAAAVLPSSHASHLLAAAAAARQLPVAGTMGVVTTATLPASASSSSTT 123
Query: 216 A 218
A
Sbjct: 124 A 124
>05_01_0405 -
3191639-3192059,3192107-3192234,3192312-3192440,
3193538-3193616,3193716-3193879,3193968-3194153,
3194258-3194389,3194484-3194575,3195054-3195150,
3195258-3195485
Length = 551
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -1
Query: 205 LVQHSQRAKQVVIVPAVRSFGNIKTAFTEETECV 104
LV+ V++PA+R+ GNI T +T+CV
Sbjct: 295 LVELLMHPSASVLIPALRTVGNIVTGDDMQTQCV 328
>10_08_0933 + 21661209-21662813
Length = 534
Score = 28.7 bits (61), Expect = 2.7
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +2
Query: 308 ENLERAPTSMLPDEDDPL-SPENLVQDNVKHFCRLMKFANGHSPALYFSMDPEEERNVTR 484
ENL + D+DD + SP+N + K F L K A H P+L ++ E R V
Sbjct: 273 ENLRAGLVPVDDDDDDDVGSPQNAPKV-AKGFLSLYKTAGDHVPSLSDAIVDEVRRLVEV 331
Query: 485 IEG 493
EG
Sbjct: 332 FEG 334
>01_01_1062 +
8381281-8381490,8382353-8382449,8382546-8382637,
8382729-8382860,8382975-8383160,8383244-8383407,
8383514-8383592,8384484-8384612,8385102-8385229,
8385348-8385711
Length = 526
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -1
Query: 172 VIVPAVRSFGNIKTAFTEETECV 104
V++PA+R+ GNI T +T+C+
Sbjct: 300 VLIPALRTVGNIVTGDDAQTQCI 322
>07_03_0457 -
18404577-18405193,18405317-18405563,18405734-18405953,
18406239-18406333
Length = 392
Score = 28.3 bits (60), Expect = 3.6
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +2
Query: 380 QDNVKHFCRLMKFANGHSPALYFSMDPEEER 472
+DNV++FC FA+ H+ ++ ++ E R
Sbjct: 348 EDNVEYFCATQLFASKHNRVMFENISTNEAR 378
>01_01_0096 + 737928-739894,740164-740221
Length = 674
Score = 28.3 bits (60), Expect = 3.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 81 YSSTDTCSYAIGCPSGSNYSIL 16
YS D+ S CPSG+NY I+
Sbjct: 223 YSLDDSSSTTFTCPSGTNYQII 244
>01_01_0093 + 727977-729854,729877-729930
Length = 643
Score = 28.3 bits (60), Expect = 3.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 81 YSSTDTCSYAIGCPSGSNYSIL 16
YS D S CPSG+NY I+
Sbjct: 221 YSRNDASSPGFTCPSGTNYQII 242
>09_04_0003 - 13577369-13578082,13579045-13579092
Length = 253
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 274 VRLTLFVGSVETFVCRRHHAGAALVQHSQ 188
+RL+ VG + R HH GA++V H +
Sbjct: 130 LRLSYMVGYGRRYPARVHHRGASIVSHKE 158
>05_06_0020 + 24976990-24977167,24978763-24978874,24979634-24979722,
24979801-24979869,24979953-24980082,24980506-24980664,
24980767-24981127,24981343-24981452,24981753-24981909,
24983336-24983748,24983828-24984020,24984384-24986198
Length = 1261
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +3
Query: 6 KRLTKSNSYYRKDIQSHNYKYPWTNTTLILREGTHS 113
K L + +S Y++ H Y PW + + GT +
Sbjct: 1040 KHLWRDDSTYQQTTNGHAYPQPWKDVNFLQARGTET 1075
>02_04_0488 + 23397480-23397687,23397777-23397805,23398462-23398564,
23398811-23398982,23399380-23399440,23399757-23399889,
23400438-23400709,23400776-23400843,23401096-23401235,
23401413-23401499,23401580-23402088,23402173-23402990,
23403024-23403222,23403662-23403817
Length = 984
Score = 27.9 bits (59), Expect = 4.7
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 105 THSVSSVNA-VLILPKL-RTAGTITTCLARWECCTSAAPA*CRRQTKVSTEPTNSVSRTK 278
+H V +N ++L KL G C+A ++ APA S +P S+S K
Sbjct: 800 SHGVDLLNRDFVVLGKLIYMLGVCMKCMAMHPEASAVAPALLDMIRSRSAKPKTSISVLK 859
Query: 279 IFLIVKK 299
FL++ K
Sbjct: 860 TFLVITK 866
>12_02_0689 +
22160627-22160720,22161331-22161425,22161679-22161822,
22162256-22162513,22162595-22162666,22162759-22162824,
22163212-22163346,22163562-22163697,22163807-22163983,
22164086-22164192,22164281-22164421,22164604-22164740,
22164823-22165076,22165158-22165300,22165423-22165581,
22166049-22166461,22167369-22167474
Length = 878
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +2
Query: 371 NLVQD---NVKHFCRLMKFANGHSPALYFSMDPEEERNVTRI 487
N +QD N++ +CR+ F GH +L S+ EER +T I
Sbjct: 327 NQIQDLKGNIRVYCRVRPFLPGHR-SLSSSVADTEERTITII 367
>11_06_0321 - 22341267-22342565
Length = 432
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 233 DKSFYGTHEQCQSNEDIFNCEEEIDENLERAPTSMLPD 346
D FY + ++ +I NC EE D LE+ ++PD
Sbjct: 280 DGKFYVIGGKADNHNEILNCGEEFD--LEKGTWRLIPD 315
>11_03_0131 + 10497674-10499617
Length = 647
Score = 27.5 bits (58), Expect = 6.3
Identities = 22/78 (28%), Positives = 36/78 (46%)
Frame = +2
Query: 101 GNAFSFLGKRGLDITKAANSGDDHHLFSSLGMLHECSPSMMSTADKSFYGTHEQCQSNED 280
G + LG G ++ SG D H SLGM+ P++ + ++ +G S+ED
Sbjct: 562 GTSGGVLGIHGFSVSHCDQSGSDSHSAQSLGMI----PAIANLHQQASFGD----VSSED 613
Query: 281 IFNCEEEIDENLERAPTS 334
N +E + L A +S
Sbjct: 614 RGNLIKENVQALSAAQSS 631
>08_02_0011 - 11234393-11235348,11235364-11235700
Length = 430
Score = 27.1 bits (57), Expect = 8.3
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 224 STADKSFYGTHEQCQSNEDIFNCEE--EIDENLER 322
S DKS G +Q NEDI E+ E+D+ LER
Sbjct: 13 SRDDKSLSGIVKQKGKNEDIDELEDIAEVDKQLER 47
>08_02_0004 + 11187587-11187923,11187939-11189861,11190195-11190391
Length = 818
Score = 27.1 bits (57), Expect = 8.3
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 224 STADKSFYGTHEQCQSNEDIFNCEE--EIDENLER 322
S DKS G +Q NEDI E+ E+D+ LER
Sbjct: 13 SRDDKSLSGIVKQKGKNEDIDELEDIAEVDKQLER 47
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,386,920
Number of Sequences: 37544
Number of extensions: 241015
Number of successful extensions: 740
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1035514020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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