Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0210
(496 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical ... 30 1.1
U41543-11|AAP40530.1| 362|Caenorhabditis elegans Hypothetical p... 29 1.9
U41543-9|AAB37021.2| 453|Caenorhabditis elegans Hypothetical pr... 29 1.9
AC006695-17|AAF39983.2| 327|Caenorhabditis elegans Hypothetical... 29 2.4
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 27 7.5
U40061-7|AAA81153.1| 357|Caenorhabditis elegans Unidentified vi... 27 7.5
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 27 7.5
Z75553-4|CAA99946.1| 389|Caenorhabditis elegans Hypothetical pr... 27 9.9
U70845-3|AAB09101.1| 244|Caenorhabditis elegans Hypothetical pr... 27 9.9
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr... 27 9.9
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 27 9.9
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 27 9.9
>AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical
protein F07G11.9 protein.
Length = 2025
Score = 29.9 bits (64), Expect = 1.1
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Frame = +2
Query: 74 DEYNANPQRGNAFSFLGKRGLDITKAANSGDDHHLFSSLGMLHECSPSMMSTADKSFYGT 253
D YN+NP N + + D+ K A + L+ S + + S + +
Sbjct: 1021 DNYNSNPSEANENAMNEELLADLQKPAVNSKLKELYKSDEKIRKILDSQHPLPREKYCEE 1080
Query: 254 HEQCQSNEDIFNCEEEIDENL---ERAPTSMLPDEDDPLSPEN 373
++ + +++I NC E +E L + T ++ D +D SP+N
Sbjct: 1081 IKKTKMSDNIKNCYCENEELLLYCQVLATKVILDGEDWNSPQN 1123
>U41543-11|AAP40530.1| 362|Caenorhabditis elegans Hypothetical
protein F46H5.2b protein.
Length = 362
Score = 29.1 bits (62), Expect = 1.9
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 185 SLGMLHECSPSMMSTADKSFYGTHEQCQSNEDIFNCEEEIDENLERAPTSM-LPDEDD 355
S+G E SPS+ +K+ E+ Q E N E+D++L RA T LPD+DD
Sbjct: 301 SVGDQEENSPSVKDAEEKTT-DNDEEMQDVEMSDN-GTEVDDDLIRAATEAPLPDDDD 356
>U41543-9|AAB37021.2| 453|Caenorhabditis elegans Hypothetical
protein F46H5.2a protein.
Length = 453
Score = 29.1 bits (62), Expect = 1.9
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 185 SLGMLHECSPSMMSTADKSFYGTHEQCQSNEDIFNCEEEIDENLERAPTSM-LPDEDD 355
S+G E SPS+ +K+ E+ Q E N E+D++L RA T LPD+DD
Sbjct: 392 SVGDQEENSPSVKDAEEKTT-DNDEEMQDVEMSDN-GTEVDDDLIRAATEAPLPDDDD 447
>AC006695-17|AAF39983.2| 327|Caenorhabditis elegans Hypothetical
protein W06H8.6 protein.
Length = 327
Score = 28.7 bits (61), Expect = 2.4
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Frame = +2
Query: 140 ITKAANSGDDHHLFSSL-GMLHECSPSMMS---TADKSFYGTHEQCQSNE 277
I K + DD L+ SL GM ++ + +M T D+ +GT + C +NE
Sbjct: 129 IQKDLDQLDDEELYCSLVGMSNDTTAMLMEVDGTGDEYSWGTEKDCYNNE 178
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +2
Query: 5 ETSNKIE*LLPEGHPIA*LQVSVDEY--NANPQ-RGNAFSFLGKRGLDITKAANSGDDH 172
ETS +E L+ +G+ + L +VDEY A P+ F + K G+ I + + H
Sbjct: 527 ETSPFVERLIAKGYEVLFLTEAVDEYCIQAMPEYESKKFQNVAKEGVTIDDGEKAKEAH 585
>U40061-7|AAA81153.1| 357|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 7 protein.
Length = 357
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +3
Query: 102 GTHSVSSVNAVLI--LPKLRTAGTITTCLARWEC 197
G V + +V++ LP L+T GT+ L W C
Sbjct: 170 GQGMVQTAGSVMLSELPPLKTRGTVLATLTMWAC 203
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 185 SLGMLHECSPSMMSTADKSFYGTHEQCQSNEDIFNCEEEIDENLERA-PTSMLP 343
S+ M+ S D S E C+ + I++C I+E E+ TS+LP
Sbjct: 133 SIDMIIPSSKRCDGLKDCSDGSDEENCKECQSIYSCRAHIEEESEKKDKTSVLP 186
>Z75553-4|CAA99946.1| 389|Caenorhabditis elegans Hypothetical
protein ZC443.4 protein.
Length = 389
Score = 26.6 bits (56), Expect = 9.9
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +2
Query: 197 LHECSPSMMSTADKSFYGTHEQCQSNEDIFNCEEEIDENLERAPTSMLPDEDDPLSPENL 376
L+E ++STA S E + +D + +EE +EN+E ++ DEDD ++
Sbjct: 252 LNEVVEKLISTAKDSGKSQKEDEEEEDDDDDDDEEEEENVE-DDENLEDDEDDRTEDQSS 310
Query: 377 VQ 382
++
Sbjct: 311 IR 312
>U70845-3|AAB09101.1| 244|Caenorhabditis elegans Hypothetical
protein F22H10.4 protein.
Length = 244
Score = 26.6 bits (56), Expect = 9.9
Identities = 18/74 (24%), Positives = 31/74 (41%)
Frame = +2
Query: 269 SNEDIFNCEEEIDENLERAPTSMLPDEDDPLSPENLVQDNVKHFCRLMKFANGHSPALYF 448
+N I N +E +S L E + ++ E L D + FC ++ A G+ F
Sbjct: 13 NNHSILNFQEVRVAGTSADTSSKLITEINKVTDELLPDDLINSFCDKLQLAYGYEIEGMF 72
Query: 449 SMDPEEERNVTRIE 490
SM + N ++
Sbjct: 73 SMQYLKVENTADVQ 86
>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical
protein R07G3.3c protein.
Length = 1316
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 257 EQCQSNEDIFNCEEEIDENLERAPTSMLPDEDDPLSPENLVQ-DNVKH 397
E+ ++ D+F + E EN+ +L + D + ENL D +KH
Sbjct: 275 EESKNAADLFKDQLEAQENVLVEVRKVLQEHQDEMERENLAHADAIKH 322
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical
protein R07G3.3a protein.
Length = 1982
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 257 EQCQSNEDIFNCEEEIDENLERAPTSMLPDEDDPLSPENLVQ-DNVKH 397
E+ ++ D+F + E EN+ +L + D + ENL D +KH
Sbjct: 275 EESKNAADLFKDQLEAQENVLVEVRKVLQEHQDEMERENLAHADAIKH 322
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical
protein R07G3.3b protein.
Length = 1987
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 257 EQCQSNEDIFNCEEEIDENLERAPTSMLPDEDDPLSPENLVQ-DNVKH 397
E+ ++ D+F + E EN+ +L + D + ENL D +KH
Sbjct: 275 EESKNAADLFKDQLEAQENVLVEVRKVLQEHQDEMERENLAHADAIKH 322
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,998,484
Number of Sequences: 27780
Number of extensions: 223091
Number of successful extensions: 781
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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