Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0206
         (433 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7P040 Cluster: Chromosome chr6 scaffold_3, whole genom...    33   3.4  
UniRef50_UPI0000586CDE Cluster: PREDICTED: similar to Gq-coupled...    32   4.5  
UniRef50_UPI0001597892 Cluster: NrsF; n=1; Bacillus amyloliquefa...    31   7.8  
UniRef50_UPI0001553551 Cluster: PREDICTED: hypothetical protein;...    31   7.8  

>UniRef50_A7P040 Cluster: Chromosome chr6 scaffold_3, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr6 scaffold_3, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 228

 Score = 32.7 bits (71), Expect = 3.4
 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +2

Query: 95  TFVL*ENNELFV-WDTSCVISYDYLVIYEDFITSTNSCGT 211
           ++ L EN E  V  + SC I +DYLV YE  IT T   G+
Sbjct: 57  SYSLSENGEFVVSLEGSCYIQFDYLVYYEASITGTLKYGS 96


>UniRef50_UPI0000586CDE Cluster: PREDICTED: similar to Gq-coupled
           rhodopsin; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to Gq-coupled rhodopsin -
           Strongylocentrotus purpuratus
          Length = 347

 Score = 32.3 bits (70), Expect = 4.5
 Identities = 15/57 (26%), Positives = 31/57 (54%)
 Frame = +2

Query: 14  LYLIFLT*LLSHTQHMIHNLSNQNFAFTFVL*ENNELFVWDTSCVISYDYLVIYEDF 184
           L+L+F+T  LS   + +    +++++F+  L    ++ +W TS V  Y Y ++   F
Sbjct: 272 LFLLFITYTLSLIPYCVFVFFDKHYSFSIWLWRAADILLWSTSAVNPYVYALMTSSF 328


>UniRef50_UPI0001597892 Cluster: NrsF; n=1; Bacillus
           amyloliquefaciens FZB42|Rep: NrsF - Bacillus
           amyloliquefaciens FZB42
          Length = 549

 Score = 31.5 bits (68), Expect = 7.8
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = +2

Query: 38  LLSHTQHMIHNLSNQNFAFTFVL--*ENNELFVWDTSCV 148
           LL   QH +  L + NF + F+L   + N+++ WD +CV
Sbjct: 243 LLKTHQHRVTQLYSPNFGYKFLLDNYKKNQIYNWDLTCV 281


>UniRef50_UPI0001553551 Cluster: PREDICTED: hypothetical protein;
           n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
           Mus musculus
          Length = 153

 Score = 31.5 bits (68), Expect = 7.8
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 359 FLDPNIKIASYVGKPRRTPVRGPDP 433
           F +P    A++ G+PRR P RGP P
Sbjct: 111 FTEPGASDAAWPGQPRRAPRRGPSP 135


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 395,494,294
Number of Sequences: 1657284
Number of extensions: 7024525
Number of successful extensions: 13250
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13246
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21075479950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)