Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0206
         (433 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   6.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.6  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   6.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    20   8.8  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    20   8.8  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +1

Query: 367 SQHQDRFLCWQTSKDSSQGSRP 432
           S+HQ  +  W    D+ +  RP
Sbjct: 28  SKHQQIYGIWADDSDNDEEERP 49


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -3

Query: 149 LHTMYPKRIIHYFLRERM*TRNFGLTDCVSCVVYVTKVKSRKS 21
           LHT+    +I Y L +    +   LT+C+  V  V  + SR +
Sbjct: 176 LHTVGIALLIFYILPDLDVVKGAMLTNCICFVPGVLGLLSRSN 218


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -3

Query: 149 LHTMYPKRIIHYFLRERM*TRNFGLTDCVSCVVYVTKVKSRKS 21
           LHT+    +I Y L +    +   LT+C+  V  V  + SR +
Sbjct: 176 LHTVGIALLIFYILPDLDVVKGAMLTNCICFVPGVLGLLSRSN 218


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -3

Query: 149 LHTMYPKRIIHYFLRERM*TRNFGLTDCVSCVVYVTKVKSRKS 21
           LHT+    +I Y L +    +   LT+C+  V  V  + SR +
Sbjct: 176 LHTVGIALLIFYILPDLDVVKGAMLTNCICFVPGVLGLLSRSN 218


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -3

Query: 149 LHTMYPKRIIHYFLRERM*TRNFGLTDCVSCVVYVTKVKSRKS 21
           LHT+    +I Y L +    +   LT+C+  V  V  + SR +
Sbjct: 176 LHTVGIALLIFYILPDLDVVKGAMLTNCICFVPGVLGLLSRSN 218


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 319 IVNRHKDLLQMTTFPRSQHQDRFLCWQT 402
           +VN HK+L+++     S +    L W T
Sbjct: 233 LVNLHKNLVKVAKDHNSLYSLHLLLWIT 260


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 136 YIVCNII*LFGNL*RFHNVNKQLWN 210
           Y VC  + + G L    N+  +LWN
Sbjct: 135 YYVCLAMTITGPLVIIGNIAMELWN 159


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 327 IDYHRKSLIDLRDYHLFLA 271
           ID++   L+ L  Y  FLA
Sbjct: 17  IDWYTVCLVPLNPYQFFLA 35


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,527
Number of Sequences: 336
Number of extensions: 1887
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9565283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)