Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0206
         (433 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    23   3.5  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   6.1  
Y13592-1|CAA73920.1|  136|Anopheles gambiae voltage-gated sodium...    22   8.1  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    22   8.1  

>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 133 GYIVCNII*LFGNL*RFHNVNKQLW 207
           GYI C  I +FG     + V+K+ W
Sbjct: 364 GYIFCKAINIFGTRSTRNTVSKKHW 388


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3

Query: 158  HMILHTMYPKRIIHYFLRERM 96
            ++ L T+ P R  +Y LRER+
Sbjct: 3240 NVFLSTVNPSRTFYYQLRERI 3260


>Y13592-1|CAA73920.1|  136|Anopheles gambiae voltage-gated sodium
           channel protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 10/35 (28%), Positives = 22/35 (62%)
 Frame = +3

Query: 171 SMKIS*RQQTVVELRKLL*IVCLLDFVYELMTMKL 275
           ++ IS   +T+  L  L  ++C++ F++ +M M+L
Sbjct: 2   NLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQL 36


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 10/35 (28%), Positives = 22/35 (62%)
 Frame = +3

Query: 171  SMKIS*RQQTVVELRKLL*IVCLLDFVYELMTMKL 275
            ++ IS   +T+  L  L  ++C++ F++ +M M+L
Sbjct: 917  NLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQL 951


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 427,272
Number of Sequences: 2352
Number of extensions: 6947
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35717724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)