Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0205
(480 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 88 6e-19
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 64 1e-11
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 58 9e-10
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 56 4e-09
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 53 3e-08
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 52 3e-08
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 52 6e-08
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 46 3e-06
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 46 4e-06
SPCC1682.09c |||guanine nucleotide transporter|Schizosaccharomyc... 46 4e-06
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 44 9e-06
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 44 1e-05
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 44 2e-05
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 42 6e-05
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 42 6e-05
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 41 8e-05
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 40 3e-04
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 39 5e-04
SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharo... 33 0.022
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 30 0.16
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 29 0.48
SPAC1F7.13c |rpl801|rpl8-1, rpl18, rpk5a, rpl2-1, SPAC21E11.02c|... 27 1.5
SPBC2F12.07c |rpl802|rpl8-2, rpk37, rpk5b|60S ribosomal protein ... 27 1.5
SPBC839.04 |rpl803|rpl8-3, rpk5-b, rpkD4|60S ribosomal protein L... 27 1.5
SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit Pst... 27 1.9
SPAC1952.06c |||DUF1716 family protein|Schizosaccharomyces pombe... 26 2.6
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 26 3.4
SPBC11C11.10 ||SPBC3B8.13c|pseudouridine synthase|Schizosaccharo... 26 3.4
SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||M... 25 4.5
SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase ... 25 5.9
SPAC18B11.05 |gpi18||pig-V|Schizosaccharomyces pombe|chr 1|||Manual 25 7.8
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 88.2 bits (209), Expect = 6e-19
Identities = 50/113 (44%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
Frame = +2
Query: 143 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 322
AG AG EV ++PLD+VKTR+Q+ KS Y+G DC+KK+ + EG +
Sbjct: 14 AGAVAGISEVLTLYPLDVVKTRMQLSVGKSD--------YNGTFDCLKKIVKNEGPHRLY 65
Query: 323 KGILPPILAETPKRAVKFATFEQYKKLF--MFGSDTPTPLTFSLAGLGAGITE 475
+GILPPIL E PKRA+KFA+ + Y KL+ +F +P L G AG TE
Sbjct: 66 RGILPPILMEAPKRALKFASNDTYSKLWRKVFKRKDSSPALSILTGSCAGFTE 118
Score = 39.5 bits (88), Expect = 3e-04
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = +2
Query: 128 AMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEG 307
A+ I G AGF E ++ P +L+K RLQ N S Y+G +DC K+ + E
Sbjct: 105 ALSILTGSCAGFTETFVVVPFELMKIRLQDVKNASK--------YNGTVDCFTKIVKQER 156
Query: 308 FTSFWKG 328
+ + G
Sbjct: 157 ILALYNG 163
Score = 37.5 bits (83), Expect = 0.001
Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 7/111 (6%)
Frame = +2
Query: 74 NHKYISKMSDVEKLLKQAAMQIG-------AGGSAGFVEVCIMHPLDLVKTRLQIQSNKS 232
N Y + + L A+ +IG AG G + P D++K+R+Q +
Sbjct: 175 NAGYFGVIQKIRNSLTPASSRIGEIRNNLIAGTIGGIFGTFLSTPFDVIKSRIQTVPRIA 234
Query: 233 AMKPSDPHYYSGIIDCMKKMYRYEGFTSFWKGILPPILAETPKRAVKFATF 385
P Y+ + + R EGFT+ +KG +P +L P + F
Sbjct: 235 GQVPK----YNWAYPALVTVAREEGFTALYKGFVPKVLRLGPGGGILLVVF 281
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 64.1 bits (149), Expect = 1e-11
Identities = 37/112 (33%), Positives = 59/112 (52%)
Frame = +2
Query: 143 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 322
AG S G +V + P D VK RLQ QSN S + Y+ +DC+KK+ + EG +F+
Sbjct: 23 AGVSGGVAQVLVGQPFDCVKVRLQSQSNVSPI-------YNNALDCVKKISKNEGLAAFY 75
Query: 323 KGILPPILAETPKRAVKFATFEQYKKLFMFGSDTPTPLTFSLAGLGAGITEA 478
KG + P+L +++F TFE K+ F T + ++G +G+ +
Sbjct: 76 KGTVLPLLGIGFCVSIQFTTFEYCKRFFSRDGTPVTMPQYYVSGAISGLANS 127
Score = 40.7 bits (91), Expect = 1e-04
Identities = 22/81 (27%), Positives = 35/81 (43%)
Frame = +2
Query: 146 GGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWK 325
G AG+ +P D+VK+++Q S Y C K +Y G F++
Sbjct: 219 GAGAGYAMWLAAYPFDIVKSKIQTDGFLSKAT------YKNSWQCAKGIYTKAGLRGFYR 272
Query: 326 GILPPILAETPKRAVKFATFE 388
G +P ++ P AV F +E
Sbjct: 273 GFVPVLVRAAPANAVTFYVYE 293
Score = 38.3 bits (85), Expect = 6e-04
Identities = 24/86 (27%), Positives = 39/86 (45%)
Frame = +2
Query: 143 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 322
+G +G ++ P++ V+ RLQIQ+ K+ + Y G DC+KK+ G +
Sbjct: 118 SGAISGLANSFLVGPVEHVRIRLQIQTGKNVL-------YHGPWDCIKKISSQYGLSGIM 170
Query: 323 KGILPPILAETPKRAVKFATFEQYKK 400
KG P E + F +E K
Sbjct: 171 KGYNPTAAREAHGLGMYFLAYEALVK 196
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 57.6 bits (133), Expect = 9e-10
Identities = 29/85 (34%), Positives = 43/85 (50%)
Frame = +2
Query: 146 GGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWK 325
G +G I+ PL++++TRLQ Q + P Y G IDC K + EGF +K
Sbjct: 342 GALSGSTGATIVFPLNVIRTRLQTQGTSA-----HPATYDGFIDCFYKTTKNEGFRGLYK 396
Query: 326 GILPPILAETPKRAVKFATFEQYKK 400
G+ P +L P A+ + +E KK
Sbjct: 397 GLSPNLLKVAPSVAISYLVYENCKK 421
Score = 47.6 bits (108), Expect = 1e-06
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Frame = +2
Query: 143 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 322
+GG AG V PLD +K L + + KPS + ++ ++ K ++ G SF+
Sbjct: 133 SGGIAGIVSRTCTAPLDRLKVML---ISDTGSKPSPKYPFATLLHTTKVLWNRNGIRSFF 189
Query: 323 KGILPPILAETPKRAVKFATFEQYKKL--FMFGSDTPTPLTFSLAGLGAG 466
G +L P+ ++KF T+E K++ S+ +PL LAG AG
Sbjct: 190 VGNGINVLKVMPESSIKFGTYEAMKRVLGISSSSENHSPLYSYLAGGMAG 239
Score = 45.2 bits (102), Expect = 5e-06
Identities = 27/89 (30%), Positives = 43/89 (48%)
Frame = +2
Query: 143 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 322
AGG AG V ++P+D +K R+Q H S I+ K++Y+ G ++
Sbjct: 234 AGGMAGSVAQMFIYPVDTLKFRIQCSDLSRGQ-----HGKSIILSNAKELYKSVGIRGYY 288
Query: 323 KGILPPILAETPKRAVKFATFEQYKKLFM 409
+G+L IL P A TFE K+ ++
Sbjct: 289 RGVLVGILGMFPYSATDLGTFEGLKRTWI 317
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 55.6 bits (128), Expect = 4e-09
Identities = 31/94 (32%), Positives = 51/94 (54%)
Frame = +2
Query: 143 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 322
+GG +G + + PLD+VKT LQ + + S + G +D ++ +Y Y G SF+
Sbjct: 210 SGGLSGAIASSLTTPLDVVKTLLQTRGSSSI---PEVRKCKGSLDVVRFIYNYGGIPSFF 266
Query: 323 KGILPPILAETPKRAVKFATFEQYKKLFMFGSDT 424
KGI P ++ P AV +A +E K++ + S T
Sbjct: 267 KGIRPRMVVAMPATAVSWAAYEAGKEILIRVSKT 300
Score = 52.0 bits (119), Expect = 5e-08
Identities = 32/104 (30%), Positives = 52/104 (50%)
Frame = +2
Query: 143 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 322
AG +G +E +M+P+D +KTR+Q+ + S + I++ + K+ EG S W
Sbjct: 25 AGAFSGILEHSVMYPVDAIKTRMQMLNGVSRSVSGN------IVNSVIKISSTEGVYSLW 78
Query: 323 KGILPPILAETPKRAVKFATFEQYKKLFMFGSDTPTPLTFSLAG 454
+GI I+ P A+ F+ E +K D PL +LAG
Sbjct: 79 RGISSVIMGAGPSHAIYFSVLEFFKSKINASPD--RPLASALAG 120
Score = 34.7 bits (76), Expect = 0.007
Identities = 22/82 (26%), Positives = 36/82 (43%)
Frame = +2
Query: 143 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 322
AG A + M P D++K R+Q+ S K Y + C ++R EG +F+
Sbjct: 119 AGACAITISDAFMTPFDVIKQRMQLPSRK----------YKSALHCATTVFRNEGLGAFY 168
Query: 323 KGILPPILAETPKRAVKFATFE 388
I P A++ AT++
Sbjct: 169 ISYPTCIAMSIPFTAIQVATYD 190
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 52.8 bits (121), Expect = 3e-08
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +2
Query: 143 AGGSAGFVEVCIMHPLDLVKTRLQIQ-SNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSF 319
AGG+AG ++ PLD+VKTR Q Q + S + G + M+ ++ EG
Sbjct: 11 AGGAAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGL 70
Query: 320 WKGILPPILAETPKRAVKFATFEQYKKLF 406
++G+ P +L P ++ F +E+ K LF
Sbjct: 71 YRGVGPMMLGYLPSWSIYFVVYEKCKVLF 99
Score = 38.3 bits (85), Expect = 6e-04
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +2
Query: 260 YSGIIDCMKKMYRYEGFTSFWKGILPPILAETPKRAVKFATFEQYK 397
Y+ D +K+Y+YEG +F++G+ P + T ++F +E +K
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSLFG-TLHVGIQFPLYEYFK 274
Score = 27.1 bits (57), Expect = 1.5
Identities = 18/75 (24%), Positives = 40/75 (53%)
Frame = +2
Query: 176 IMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWKGILPPILAET 355
+ +P ++++TRLQ S P+ H + ++ ++ ++R EG+ ++ G+ +
Sbjct: 303 VTYPHEVLRTRLQ-----SLDAPT--HNSATLL--IRDIWRSEGWRKYYSGMATNFIRTI 353
Query: 356 PKRAVKFATFEQYKK 400
P +V F +FE +K
Sbjct: 354 PASSVTFLSFEIVRK 368
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 52.4 bits (120), Expect = 3e-08
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Frame = +2
Query: 143 AGGSAGFVEVCIMHPLDLVKTRLQ--IQSNKSAMKPSDPHYYSGIIDCMKKMYRYEG-FT 313
AGG G +MH LD VKTR Q + +NK Y+G++ C + EG F
Sbjct: 21 AGGIGGATADFLMHSLDTVKTRQQAALYTNK----------YNGMVKCYSTILCEEGVFH 70
Query: 314 SFWKGILPPILAETPKRAVKFATFEQYKKLFMFGSDTPTPLTFSLAG 454
+ G+ P ++ P A+ F+++E K+ M + P L F LAG
Sbjct: 71 GLYSGVCPMLIGSLPATALFFSSYEYTKRHLMSNYNLPETLCFLLAG 117
Score = 34.3 bits (75), Expect = 0.010
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Frame = +2
Query: 185 PLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWKGILPPILAETPKR 364
P +++KTRLQ+Q + + Y +K++ + EG +F+ G IL + P
Sbjct: 130 PSEVLKTRLQLQGRYNNPHFQSNYNYPSFRGAVKQIAKQEGMKTFFYGYRATILRDIPFS 189
Query: 365 AVKFATFEQYKKLFM--FGSDT----PTPLTFSLAGLGAG 466
+ +E+ +++ G +T SLAG GAG
Sbjct: 190 GFQLLFYEKLRQVAQKECGQKDIGVFRELITGSLAGAGAG 229
Score = 24.6 bits (51), Expect = 7.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 143 AGGSAGFVEVCIMHPLDLVKTRLQ 214
AG AGF+ PLD+ KTRLQ
Sbjct: 224 AGAGAGFLTT----PLDVAKTRLQ 243
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 51.6 bits (118), Expect = 6e-08
Identities = 27/99 (27%), Positives = 50/99 (50%)
Frame = +2
Query: 119 KQAAMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYR 298
K A + +GG+AG + ++ LD +TRL KSA K + ++G++D +K YR
Sbjct: 130 KWFAGNLASGGAAGAASLLFVYSLDYARTRL-ANDAKSAKKGGE-RQFNGLVDVYRKTYR 187
Query: 299 YEGFTSFWKGILPPILAETPKRAVKFATFEQYKKLFMFG 415
+G ++G P ++ R + F ++ K + + G
Sbjct: 188 SDGLRGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLVG 226
Score = 47.6 bits (108), Expect = 1e-06
Identities = 27/87 (31%), Positives = 43/87 (49%)
Frame = +2
Query: 146 GGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWK 325
GG + V P++ VK +Q Q ++ H Y GI +C K+ EG S W+
Sbjct: 34 GGVSAAVSKTAAAPIERVKLLIQNQ-DEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWR 92
Query: 326 GILPPILAETPKRAVKFATFEQYKKLF 406
G +L P +A+ FA +++KK+F
Sbjct: 93 GNTANVLRYFPTQALNFAFKDKFKKMF 119
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 46.0 bits (104), Expect = 3e-06
Identities = 35/112 (31%), Positives = 51/112 (45%)
Frame = +2
Query: 143 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 322
AGG AG +E+ I +P + KTRLQ+ N K P + G+ ++
Sbjct: 23 AGGVAGAIEISITYPAEFAKTRLQLYRNVEGTKAKLPPF--GL--------------EWY 66
Query: 323 KGILPPILAETPKRAVKFATFEQYKKLFMFGSDTPTPLTFSLAGLGAGITEA 478
+G I+ + K AV+F F+ KK T LAGLGAG+ E+
Sbjct: 67 RGCSTVIVGNSLKAAVRFFAFDSIKKSLSDEHGHLTGPRTVLAGLGAGVAES 118
Score = 38.7 bits (86), Expect = 5e-04
Identities = 28/105 (26%), Positives = 45/105 (42%)
Frame = +2
Query: 89 SKMSDVEKLLKQAAMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSG 268
S++ EKL +G+ AG + V P+D VK+R+Q + SA K Y
Sbjct: 193 SRLPPDEKLSTVTTFLVGS--VAGIITVYCTQPIDTVKSRMQ---SLSASKE-----YKN 242
Query: 269 IIDCMKKMYRYEGFTSFWKGILPPILAETPKRAVKFATFEQYKKL 403
I C K+ +G FW G P + + F +E+ ++
Sbjct: 243 SIHCAYKILTQDGLLRFWSGATPRLARLILSGGIVFTVYEKVMEI 287
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 45.6 bits (103), Expect = 4e-06
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 13/134 (9%)
Frame = +2
Query: 101 DVEKLLKQAAMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQS--NKSAMKPSD-------- 250
DV+ + K + +G+ + + PLD+VKTRLQ +S S+ +P
Sbjct: 21 DVKPIAKMLSACVGS-----VITTLTVTPLDVVKTRLQSESISQYSSTQPISSAKILGKG 75
Query: 251 ---PHYYSGIIDCMKKMYRYEGFTSFWKGILPPILAETPKRAVKFATFEQYKKLFMFGSD 421
P G + + ++ R+EG S W+G++P + P V+F +EQ L+ SD
Sbjct: 76 RPAPKPLGGPVSGLYQIARHEGVRSLWRGLVPSLTMLLPANTVQFLGYEQLLPLY---SD 132
Query: 422 TPTPLTFSLAGLGA 463
P ++AG A
Sbjct: 133 WGFPAAAAIAGASA 146
>SPCC1682.09c |||guanine nucleotide transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 300
Score = 45.6 bits (103), Expect = 4e-06
Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Frame = +2
Query: 80 KYISKMSDVEKL-LKQAAMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPH 256
+YI K+ D + Q AG SA + + PLD++KTR+Q NK+ P
Sbjct: 198 EYIFKLKDYSQATFFQNFFTSIAGASASLI---VSAPLDVIKTRIQ---NKNFDNPQ--- 248
Query: 257 YYSGIIDCMKKMYRYEGFTSFWKGILPPILAETPKRAVKF 376
SG +K M ++EG TSF+KG+ P +L PK F
Sbjct: 249 --SGFT-ILKNMLKFEGPTSFFKGLTPKLLTTGPKLVFSF 285
Score = 28.3 bits (60), Expect = 0.64
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 122 QAAMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNK 229
Q A +G+ SAG +E+ + HP+D + RL K
Sbjct: 12 QTARIVGSA-SAGILELSLFHPVDTISKRLMSNHGK 46
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 44.4 bits (100), Expect = 9e-06
Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 1/112 (0%)
Frame = +2
Query: 77 HKYISKMSDVEKLLKQAAMQ-IGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDP 253
+ + +M + LL++ ++ + A +GF C M D V TR+ Q NK
Sbjct: 212 YNWAKRMIEHYNLLEEGMIKHLTASAVSGFGVCCTMQIFDTVMTRMYNQKNKEL------ 265
Query: 254 HYYSGIIDCMKKMYRYEGFTSFWKGILPPILAETPKRAVKFATFEQYKKLFM 409
Y IDC+ K R EGF + +KG + P EQ KLF+
Sbjct: 266 --YKNPIDCILKTIRSEGFFALYKGFGAHLARIAPHTIFCLTFVEQTNKLFL 315
Score = 35.9 bits (79), Expect = 0.003
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +2
Query: 143 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 322
+GG A V + +P +++KTR Q+Q + + PS Y + + R+EG
Sbjct: 29 SGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDPS-KRIYKSVGQAFSLIARHEGIRGLQ 87
Query: 323 KGI 331
+G+
Sbjct: 88 RGL 90
Score = 29.5 bits (63), Expect = 0.28
Identities = 20/92 (21%), Positives = 37/92 (40%)
Frame = +2
Query: 128 AMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEG 307
A+ + +G +G P LVKTR+Q S K + + Y I + ++ + G
Sbjct: 129 AINVASGAGSGLCGALFGSPFFLVKTRMQSYSPKFPV--GQQYGYKHIFNAFSRIIKENG 186
Query: 308 FTSFWKGILPPILAETPKRAVKFATFEQYKKL 403
+ G IL +V+ + K++
Sbjct: 187 VKGLFVGADAAILRTVSGSSVQLPIYNWAKRM 218
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 44.0 bits (99), Expect = 1e-05
Identities = 31/90 (34%), Positives = 44/90 (48%)
Frame = +2
Query: 86 ISKMSDVEKLLKQAAMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYS 265
+S++ EKL +++ + AG GF+ + PLDL+KTR Q QS + ++ P
Sbjct: 1 MSEIKKTEKLGVKSSKHLAAGALGGFISSTTLQPLDLLKTRCQ-QSQRDSL----PKMVR 55
Query: 266 GIIDCMKKMYRYEGFTSFWKGILPPILAET 355
II G S WKG LP IL T
Sbjct: 56 RII------LHEGGVFSLWKGTLPSILRST 79
Score = 38.7 bits (86), Expect = 5e-04
Identities = 21/86 (24%), Positives = 40/86 (46%)
Frame = +2
Query: 131 MQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGF 310
+ + +G +G I +P D++KTR+Q++ PH Y + K +Y EGF
Sbjct: 212 VNVMSGLISGATATAITNPFDMLKTRVQLE----------PHIYKNFLHSAKLVYANEGF 261
Query: 311 TSFWKGILPPILAETPKRAVKFATFE 388
F G +L ++ + ++ +E
Sbjct: 262 RGFLDGFFLRVLRKSISSTITWSVYE 287
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 43.6 bits (98), Expect = 2e-05
Identities = 26/93 (27%), Positives = 45/93 (48%)
Frame = +2
Query: 119 KQAAMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYR 298
+ + + + A AG + +P+ LVKTRLQ+ K Y IDC+ K R
Sbjct: 160 ENSQIHLMAAAIAGVITSAATNPIWLVKTRLQLDK-----KSGQAAQYRSSIDCIIKTIR 214
Query: 299 YEGFTSFWKGILPPILAETPKRAVKFATFEQYK 397
EGF +KG+ +L + +++ +E++K
Sbjct: 215 LEGFRGLYKGLSASLLG-VGESTLQWVLYEKFK 246
Score = 43.6 bits (98), Expect = 2e-05
Identities = 24/85 (28%), Positives = 43/85 (50%)
Frame = +2
Query: 134 QIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFT 313
++G G A F+ I +P ++V+TRL+ QS P Y+G+I C K ++ +G
Sbjct: 275 KLGGAGIAKFMAAGIAYPHEVVRTRLR-QSPSINGTPK----YTGLIQCFKLVWMEQGIV 329
Query: 314 SFWKGILPPILAETPKRAVKFATFE 388
+ G+ +L P + F ++E
Sbjct: 330 GLYGGLTAHLLRVVPNACILFGSYE 354
Score = 40.7 bits (91), Expect = 1e-04
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Frame = +2
Query: 143 AGGSAGFVEVCIMHPLDLVKTRLQ--------IQSNKSAMKPSDPHYYSGIIDC--MKKM 292
AGG AG + PLD+VKTRLQ ++ + P Y + C +K +
Sbjct: 54 AGGVAGMLGAIATAPLDVVKTRLQSDFYKDRFLKQTAKSKSPLTAAYRHFMDTCIILKNV 113
Query: 293 YRYEGFTSFWKGILPPILAETPKRAVKFATFEQYKKL 403
+EG + ++G+ P ++ P R++ F ++ K++
Sbjct: 114 KVHEGTRALFRGLGPNLIGTIPARSINFFSYGNGKRI 150
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 41.5 bits (93), Expect = 6e-05
Identities = 28/108 (25%), Positives = 51/108 (47%)
Frame = +2
Query: 143 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 322
AGG+AG V ++ PLD VK + Q+N ++ + + G+ +K +Y G +
Sbjct: 23 AGGTAGCVAKSVVAPLDRVK--ILYQTNHASYR-GYAYSRHGLYKAIKHIYHVYGLHGLY 79
Query: 323 KGILPPILAETPKRAVKFATFEQYKKLFMFGSDTPTPLTFSLAGLGAG 466
+G + P +KF +EQ +++ + + T L+G AG
Sbjct: 80 QGHTATLYRVFPYAGIKFVAYEQVRRVLIRDPEHETHARRFLSGSLAG 127
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 41.5 bits (93), Expect = 6e-05
Identities = 22/71 (30%), Positives = 39/71 (54%)
Frame = +2
Query: 179 MHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWKGILPPILAETP 358
M+PL +++TRLQ+ + PH I++ + + +R +G F+KG LP +L P
Sbjct: 204 MYPLLVIRTRLQVMRS--------PH--RSIMNLVLQTWRLQGILGFYKGFLPHLLRVVP 253
Query: 359 KRAVKFATFEQ 391
+ + F +EQ
Sbjct: 254 QTCITFLVYEQ 264
Score = 32.3 bits (70), Expect = 0.039
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +2
Query: 143 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSA 235
AG +AG IMHPLDL K ++Q N+ +
Sbjct: 6 AGLAAGTASTLIMHPLDLAKIQMQASMNQDS 36
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 41.1 bits (92), Expect = 8e-05
Identities = 28/96 (29%), Positives = 45/96 (46%)
Frame = +2
Query: 113 LLKQAAMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKM 292
LL + + +GG A V + PL+ +K Q+Q+NK Y+ + + K+
Sbjct: 16 LLSNDLISMLSGGVAATVSRTAVSPLERMKIIFQVQNNKE---------YTSLTSTLVKI 66
Query: 293 YRYEGFTSFWKGILPPILAETPKRAVKFATFEQYKK 400
+ EG F++G L P AV+FATF K+
Sbjct: 67 WNREGLIGFFRGNGTNCLRAFPYGAVQFATFNMLKQ 102
Score = 25.8 bits (54), Expect = 3.4
Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Frame = +2
Query: 146 GGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSG---------IIDCMKKMYR 298
G AG +PLD+ +TRL I++ + + + + + + +
Sbjct: 122 GAIAGAASCATTYPLDIARTRLSIETAGLTSRSLAINNVANNSLKVKPLTLWSTLLYIVQ 181
Query: 299 YE-GFTSFWKGILPPILAETPKRAVKFATFEQYKKLFMFGSD 421
+E G+ + + G+ +L P ++ F TFE K+ F +D
Sbjct: 182 HEGGYPALYNGLPATLLNVVPYVSICFFTFEFCKQKFFSNAD 223
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 39.5 bits (88), Expect = 3e-04
Identities = 24/105 (22%), Positives = 51/105 (48%)
Frame = +2
Query: 77 HKYISKMSDVEKLLKQAAMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPH 256
HKY + + + + ++ + A SA + ++ P++ +K R+Q S+P
Sbjct: 104 HKYSTLVGAQKAHEYRTSIYLAASASAELLADIMLCPMEAIKVRVQT---------SNPR 154
Query: 257 YYSGIIDCMKKMYRYEGFTSFWKGILPPILAETPKRAVKFATFEQ 391
+ + + K+ EGF + ++G+ P + P +KFA+FE+
Sbjct: 155 FANTTREAWSKIVTNEGFGTLYRGLAPLWFRQIPYTMMKFASFER 199
Score = 29.9 bits (64), Expect = 0.21
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = +2
Query: 185 PLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWKGILPPILAETPKR 364
PLDL+K R Q+ +P+ Y G I K + EG + G +P ++ + +
Sbjct: 43 PLDLIKCRKQV----------NPNIYPGNIAGFKTILSKEGLRGLYTGGMPTLIGYSLQG 92
Query: 365 AVKFATFEQYK 397
K+ +E +K
Sbjct: 93 CGKYGFYELFK 103
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 38.7 bits (86), Expect = 5e-04
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Frame = +2
Query: 80 KYISKMSDVEKLLKQAAMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHY 259
KY+ K S+ + + A A G+ V I PLD+VKTR Q+ + SAM+ ++
Sbjct: 162 KYLQKQSNWD--ISVIAPICSALGTV--VATTISTPLDIVKTRYQV-ATSSAMRKAEYGL 216
Query: 260 YS----GIIDCMKKMYRYEGFTSFWKGILPPILAETPKRAVKFATFEQYK 397
+ GI++ K ++ G F +G+ + P + + FE +K
Sbjct: 217 QAEKELGILEIAKLLFSKHGVKGFTRGLFTRMCYIMPSGMISMSVFESFK 266
>SPAC12B10.09 |||S-adenosylmethionine transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 345
Score = 33.1 bits (72), Expect = 0.022
Identities = 24/89 (26%), Positives = 43/89 (48%)
Frame = +2
Query: 80 KYISKMSDVEKLLKQAAMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHY 259
K+ K S + L +AA+ +G AG + + P D+VKTR+ + +
Sbjct: 246 KWRIKHSRNKNLAHEAAI---SGSIAGGIAAALTTPFDVVKTRIMTSQQRLSY------- 295
Query: 260 YSGIIDCMKKMYRYEGFTSFWKGILPPIL 346
+ +K + +EGF + +KGI+P +L
Sbjct: 296 ----VFTIKSIVAHEGFLALYKGIVPRVL 320
Score = 26.2 bits (55), Expect = 2.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 137 IGAGGSAGFVEVCIMHPLDLVKTRLQ 214
+GAG AG + P+D +KTRLQ
Sbjct: 86 LGAGICAGLAVDLSLFPIDTLKTRLQ 111
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 30.3 bits (65), Expect = 0.16
Identities = 30/128 (23%), Positives = 55/128 (42%)
Frame = +2
Query: 86 ISKMSDVEKLLKQAAMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYS 265
++K D ++ + AGG + + ++ P D++K R+QI +S+++P
Sbjct: 3 LAKQKDSQEFAQPVWHYTLAGGISSVICRFMIAPFDVIKIRMQI--TQSSLRP------- 53
Query: 266 GIIDCMKKMYRYEGFTSFWKGILPPILAETPKRAVKFATFEQYKKLFMFGSDTPTPLTFS 445
K+ + EG + W+G + L A +F F + K L + + F
Sbjct: 54 ----VFKETVQKEGVRALWRGNVVAELLYLVYGAAEFVAFSKLKHLTENLAMNDHAVNF- 108
Query: 446 LAGLGAGI 469
L G AGI
Sbjct: 109 LCGTSAGI 116
Score = 28.3 bits (60), Expect = 0.64
Identities = 21/74 (28%), Positives = 29/74 (39%)
Frame = +2
Query: 143 AGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFW 322
+G AG IM P+D V LQ + P Y DC +YR G +
Sbjct: 198 SGVIAGAGSKAIMFPVDTVVKTLQ----------TFPSNYKSFKDCFLSIYRNSGIKGLY 247
Query: 323 KGILPPILAETPKR 364
+G+ +L P R
Sbjct: 248 RGLSVSMLKVAPGR 261
Score = 25.4 bits (53), Expect = 4.5
Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 1/113 (0%)
Frame = +2
Query: 128 AMQIGAGGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEG 307
A+ G SAG +PLD ++T K A PH ++ KK+Y G
Sbjct: 105 AVNFLCGTSAGIFATLTSYPLDTMRT-------KFASYAKTPH----MLPATKKIYAEAG 153
Query: 308 FTSFWKGILPPILAETPKRAVKFATFEQYKK-LFMFGSDTPTPLTFSLAGLGA 463
F+ G+ ++ P F + + L G + L+ +AG G+
Sbjct: 154 IKGFFPGLKFSVIQIGPYAGCFFMFYRASEAVLSPLGLALSSTLSGVIAGAGS 206
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 28.7 bits (61), Expect = 0.48
Identities = 17/81 (20%), Positives = 39/81 (48%)
Frame = +2
Query: 155 AGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWKGIL 334
+G + ++ PLD++KT++ ++ P Y ++ +++Y+ G F KG+
Sbjct: 177 SGAITAAVLTPLDVIKTQINLR----------PESYRKVV---RRIYKENGIFGFEKGLG 223
Query: 335 PPILAETPKRAVKFATFEQYK 397
+ A + ++ T+E K
Sbjct: 224 LRVFASSLGLSIYLGTYEHVK 244
>SPAC1F7.13c |rpl801|rpl8-1, rpl18, rpk5a, rpl2-1, SPAC21E11.02c|60S
ribosomal protein L8|Schizosaccharomyces pombe|chr
1|||Manual
Length = 253
Score = 27.1 bits (57), Expect = 1.5
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 146 GGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGII 274
G S+G + + H +D KTR+++ S + PS GI+
Sbjct: 126 GRSSGNYVIIVGHDVDTGKTRVKLPSGAKKVVPSSARGVVGIV 168
>SPBC2F12.07c |rpl802|rpl8-2, rpk37, rpk5b|60S ribosomal protein
L8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 253
Score = 27.1 bits (57), Expect = 1.5
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 146 GGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGII 274
G S+G + + H +D KTR+++ S + PS GI+
Sbjct: 126 GRSSGNYVIIVGHDVDTGKTRVKLPSGAKKVVPSSARGVVGIV 168
>SPBC839.04 |rpl803|rpl8-3, rpk5-b, rpkD4|60S ribosomal protein
L8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 253
Score = 27.1 bits (57), Expect = 1.5
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 146 GGSAGFVEVCIMHPLDLVKTRLQIQSNKSAMKPSDPHYYSGII 274
G S+G + + H +D KTR+++ S + PS GI+
Sbjct: 126 GRSSGNYVIIVGHDVDTGKTRVKLPSGAKKVVPSSARGVVGIV 168
>SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit
Pst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1075
Score = 26.6 bits (56), Expect = 1.9
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = +2
Query: 245 SDPHYYSGIIDCMKKMYRYEGFTSFWKGILPPILAETPKRAVKFATFEQYKKLFMFGSDT 424
S+P + + D ++K E S + I+ +LAE P A +F F FGS
Sbjct: 158 SNPEQFFKLQDSLRKFKNSECSLSELQTIVTSLLAEHPSLAHEFHNF--LPSSIFFGSKP 215
Query: 425 PTPLTFSLAGL 457
P +F L G+
Sbjct: 216 PLG-SFPLRGI 225
>SPAC1952.06c |||DUF1716 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 564
Score = 26.2 bits (55), Expect = 2.6
Identities = 33/150 (22%), Positives = 65/150 (43%), Gaps = 3/150 (2%)
Frame = +2
Query: 14 CAFINKNTFNSNWF*LK*K*NHKYISKMSDVEKLLKQAAMQIGAGGSAGFVEVCIMHPLD 193
C+ I +NT W + + IS ++++ ++ A+ I A ++VC ++ +D
Sbjct: 234 CSIIVENTTLVEWLLSRSSVDETSIS--TNLQYAVEILAI-ILANSKEAKLKVCNLNGID 290
Query: 194 LVKTRLQIQSNKSAMKPSDPHYYSGIIDCMKKMYR-YEGFTSFWK--GILPPILAETPKR 364
L+ R+ + + S+ + DC+ + + +G + F K GI IL K
Sbjct: 291 LLLRRISPYRLRDPTQGSEEEMMENVFDCLCSLVQETKGKSLFLKEEGIELCILNMKHKG 350
Query: 365 AVKFATFEQYKKLFMFGSDTPTPLTFSLAG 454
+++T + L TP + F AG
Sbjct: 351 KSRYSTIKVLDYLLFGPLSTPYCIRFVEAG 380
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 25.8 bits (54), Expect = 3.4
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +2
Query: 296 RYEGFTSFWKGILPPILAETPKRAVKFATFEQYKKLFMFGSDTPTPLTFSLAGLGAG 466
RY GFT+ W G + + A F +E +KK + +D ++ +G G
Sbjct: 171 RY-GFTALWNGYRYHLTRDALGSACYFTIYETFKK-NLIANDVKPHFAYAFSGAFCG 225
>SPBC11C11.10 ||SPBC3B8.13c|pseudouridine
synthase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 407
Score = 25.8 bits (54), Expect = 3.4
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -1
Query: 438 VSGVGVSDPNIKSFLYCSKVANLTALLGVSAN 343
V G+G + S L C K TAL G S +
Sbjct: 123 VVGLGTGTKQLSSLLSCMKTYRATALFGCSTD 154
>SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1317
Score = 25.4 bits (53), Expect = 4.5
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -1
Query: 423 VSDPNIKSFLYCSKVANLTALLGVSANIGGRIPFQNEVKPSYLY 292
++D +K+F C+ T L + IGG+ P EVKP + Y
Sbjct: 1096 ITDTILKAFQACAASQGDTNNL--TFGIGGKDPETGEVKPGFGY 1137
>SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase
Its3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 742
Score = 25.0 bits (52), Expect = 5.9
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 218 QSNKSAMKPSDPHYYSGIIDCMKKMYRYEGFTSFWKGI 331
Q+ +P + +Y GIID + K + WKGI
Sbjct: 598 QATDENNEPGNFIFYIGIIDLLTKYSYVKRVEHLWKGI 635
>SPAC18B11.05 |gpi18||pig-V|Schizosaccharomyces pombe|chr 1|||Manual
Length = 426
Score = 24.6 bits (51), Expect = 7.8
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -3
Query: 277 IYNTAVVMWI*WFHC*FVTLYLKPSLDQIQWVHNTHFHK 161
I+ T + WI W FV + + SL + +W ++ + K
Sbjct: 79 IFRTLFISWIRWDAIYFVDMAVNGSLFEQEWAFSSLWPK 117
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,959,133
Number of Sequences: 5004
Number of extensions: 40118
Number of successful extensions: 174
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 155
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 184020746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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