Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0204
         (520 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   1.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   1.6  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   5.0  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   5.0  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   6.5  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.7  

>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +3

Query: 444  LDDTXREKAKLEIDLKRLYEEN 509
            +D+   EKA++  DLK L +++
Sbjct: 1247 IDENKEEKARIAADLKELRDQS 1268


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +3

Query: 444  LDDTXREKAKLEIDLKRLYEEN 509
            +D+   EKA++  DLK L +++
Sbjct: 1247 IDENKEEKARIAADLKELRDQS 1268


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 118 VFLVFVYLVGYIFVTITNFD 59
           +FL+FV    Y+  T++NF+
Sbjct: 188 IFLMFVSYNIYVCQTVSNFE 207


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -1

Query: 118 VFLVFVYLVGYIFVTITNFD 59
           +FL+FV    Y+  T++NF+
Sbjct: 114 IFLMFVSYNIYVCQTVSNFE 133


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -1

Query: 244 LVGLSGLLGRPAELEGRLPTGVLDCSGLCSD 152
           ++GLS +LGR   +E  LP  +      C +
Sbjct: 351 IMGLSPILGRHNTIEHLLPLFLTQLKDECPE 381


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 88  IPLSIQKQEKL*HLHQML 141
           +  S+QK ++L HLH  L
Sbjct: 250 VTFSVQKIQELSHLHYKL 267


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 88  IPLSIQKQEKL*HLHQML 141
           +  S+QK ++L HLH  L
Sbjct: 206 VTFSVQKIQELSHLHYKL 223


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,857
Number of Sequences: 336
Number of extensions: 2595
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)