Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0202
(403 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin pr... 147 3e-36
AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin ... 147 3e-36
Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical pr... 51 3e-07
U40802-4|AAK19010.1| 80|Caenorhabditis elegans Hypothetical pr... 27 3.8
U80033-2|AAM15608.1| 1009|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z81553-1|CAB04490.2| 327|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z66494-5|CAA91259.1| 473|Caenorhabditis elegans Hypothetical pr... 27 6.7
U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain (pr... 27 6.7
AY349016-1|AAQ55496.1| 394|Caenorhabditis elegans NHR-41 protein. 27 6.7
AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein. 27 6.7
AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein. 27 6.7
>X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin
protein.
Length = 395
Score = 147 bits (356), Expect = 3e-36
Identities = 65/117 (55%), Positives = 87/117 (74%), Gaps = 1/117 (0%)
Frame = +3
Query: 54 INCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYA 233
++ +V+F+E+F D SWE WV S+H +FG FKL+AGKFF D+G++TS+DA+FY+
Sbjct: 13 VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFYS 71
Query: 234 LSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMF 401
+ KF K FSN+GK LV+Q+TVKHEQ IDCGGGY+KV + D HGETPY +MF
Sbjct: 72 RAAKFDKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMF 128
>AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin
protein 1 protein.
Length = 395
Score = 147 bits (356), Expect = 3e-36
Identities = 65/117 (55%), Positives = 87/117 (74%), Gaps = 1/117 (0%)
Frame = +3
Query: 54 INCDVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYA 233
++ +V+F+E+F D SWE WV S+H +FG FKL+AGKFF D+G++TS+DA+FY+
Sbjct: 13 VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFYS 71
Query: 234 LSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMF 401
+ KF K FSN+GK LV+Q+TVKHEQ IDCGGGY+KV + D HGETPY +MF
Sbjct: 72 RAAKFDKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMF 128
>Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical
protein ZK632.6 protein.
Length = 619
Score = 51.2 bits (117), Expect = 3e-07
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = +3
Query: 186 EDDKGLKTSEDARFYALSRKFK-PFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFD--CKL 356
E D GL AR +A++ K PF+ + VVQ+ +K E+ +CGGGYLK+ +
Sbjct: 107 EGDLGLIVKTKARHHAIAAKLNTPFAFDANTFVVQYDIKFEEGQECGGGYLKLLSEGAEK 166
Query: 357 EQKDMHGETPYEIMF 401
+ + +T Y IMF
Sbjct: 167 DLANFQDKTAYTIMF 181
>U40802-4|AAK19010.1| 80|Caenorhabditis elegans Hypothetical
protein ZC477.4 protein.
Length = 80
Score = 27.5 bits (58), Expect = 3.8
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 208 PLKMRGSMLSPVSSNRSVMRVNPWSXSSLSNMNKTLTVEADTLRSLTANWSRRTCTERP 384
PLK+ S SS+ + ++ P S S +++++ L VE + A S CTE+P
Sbjct: 6 PLKILPGASSSSSSSTASSQIRPPSLSLSASLSEELRVEECGSPRVGAKESSFYCTEQP 64
>U80033-2|AAM15608.1| 1009|Caenorhabditis elegans Hypothetical
protein T23H2.3 protein.
Length = 1009
Score = 27.1 bits (57), Expect = 5.0
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -3
Query: 362 LLQFAVKDLKVSASTVNVLFMFDSELXDQGFTLITERFELTGESIEPRIFRG 207
L + ++K+L+ + L F S L D G + + E+T E IE RI G
Sbjct: 233 LQKLSIKELEANKDKKLKLLKFSSNLPDNGARVKLQVDEIT-EEIERRIING 283
>Z81553-1|CAB04490.2| 327|Caenorhabditis elegans Hypothetical
protein F56H6.1 protein.
Length = 327
Score = 26.6 bits (56), Expect = 6.7
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +3
Query: 72 FEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGL 203
F EK D + + ++E G G+ AG F +D DDKGL
Sbjct: 218 FVEKLYHDEYTCPYDWAEDRG--MGRCMARAGIFPTDTRDDKGL 259
>Z66494-5|CAA91259.1| 473|Caenorhabditis elegans Hypothetical
protein C34C6.5a protein.
Length = 473
Score = 26.6 bits (56), Expect = 6.7
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 277 WSXSSLSNMNKTLTVEADTLRSLTANWSRRTCTERPHM 390
W S L+ + T+ + T+RS+ + S+ TCTE HM
Sbjct: 15 WYSSLLTIFSLTIKRKLKTIRSMQDSTSKCTCTEH-HM 51
>U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 9 protein.
Length = 591
Score = 26.6 bits (56), Expect = 6.7
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -1
Query: 247 NLRERA*NLASSEVFKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQ 110
++ E + L + V +S L + ++ +F SFP C LYT+
Sbjct: 352 SITEMSVQLTTYGVNPAISMDRRLSRYSRISCSFHFSFPSCLLYTK 397
>AY349016-1|AAQ55496.1| 394|Caenorhabditis elegans NHR-41 protein.
Length = 394
Score = 26.6 bits (56), Expect = 6.7
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = -1
Query: 292 VNXTTKGLPSLLNGLNLRERA*NLASSEVFKPLSSSGSLKNFPA-VNLNFPNSFPGCSLY 116
++ T + LPS + R +AS E+F+ +SSS S +N + ++N +S +
Sbjct: 245 ISFTAQDLPSSMASPETRS-VNQMASQELFEYVSSSKSTQNHMSNEHINVDDSTSEDN-D 302
Query: 115 TQLLSHESSGNFSSKNTSQFIE 50
T + S +SS N +++ S+ ++
Sbjct: 303 THVTSQQSSVNIAAERFSRILQ 324
>AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein.
Length = 459
Score = 26.6 bits (56), Expect = 6.7
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = -1
Query: 292 VNXTTKGLPSLLNGLNLRERA*NLASSEVFKPLSSSGSLKNFPA-VNLNFPNSFPGCSLY 116
++ T + LPS + R +AS E+F+ +SSS S +N + ++N +S +
Sbjct: 342 ISFTAQDLPSSMASPETRS-VNQMASQELFEYVSSSKSTQNHMSNEHINVDDSTSEDN-D 399
Query: 115 TQLLSHESSGNFSSKNTSQFIE 50
T + S +SS N +++ S+ ++
Sbjct: 400 THVTSQQSSVNIAAERFSRILQ 421
>AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein.
Length = 583
Score = 26.6 bits (56), Expect = 6.7
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = -1
Query: 292 VNXTTKGLPSLLNGLNLRERA*NLASSEVFKPLSSSGSLKNFPA-VNLNFPNSFPGCSLY 116
++ T + LPS + R +AS E+F+ +SSS S +N + ++N +S +
Sbjct: 466 ISFTAQDLPSSMASPETRS-VNQMASQELFEYVSSSKSTQNHMSNEHINVDDSTSEDN-D 523
Query: 115 TQLLSHESSGNFSSKNTSQFIE 50
T + S +SS N +++ S+ ++
Sbjct: 524 THVTSQQSSVNIAAERFSRILQ 545
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,654,796
Number of Sequences: 27780
Number of extensions: 194319
Number of successful extensions: 697
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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