Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0198
(737 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81057-1|CAB02914.2| 460|Caenorhabditis elegans Hypothetical pr... 34 0.091
Z75710-9|CAB00024.2| 752|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical pr... 31 0.85
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 31 0.85
AF408755-1|AAO27834.1| 360|Caenorhabditis elegans unknown prote... 31 0.85
AF047651-4|AAK67208.2| 516|Caenorhabditis elegans Hypothetical ... 31 0.85
AF047651-3|AAZ82848.1| 515|Caenorhabditis elegans Hypothetical ... 31 0.85
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z81134-7|CAD56602.1| 879|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81134-6|CAB03450.2| 795|Caenorhabditis elegans Hypothetical pr... 30 1.5
AL117202-32|CAD56611.1| 879|Caenorhabditis elegans Hypothetical... 30 1.5
AL117202-31|CAD56610.1| 795|Caenorhabditis elegans Hypothetical... 30 1.5
AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric c... 30 1.5
Z81523-11|CAB04247.2| 403|Caenorhabditis elegans Hypothetical p... 29 2.6
Z69661-2|CAA93494.1| 925|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z69302-8|CAA93261.3| 420|Caenorhabditis elegans Hypothetical pr... 29 2.6
U40939-3|ABD63235.1| 960|Caenorhabditis elegans Hunchback like ... 29 2.6
U40939-2|AAA81701.3| 982|Caenorhabditis elegans Hunchback like ... 29 2.6
AF097737-1|AAD16170.1| 982|Caenorhabditis elegans hunchback-rel... 29 2.6
AC006644-3|AAF39838.2| 491|Caenorhabditis elegans Hypothetical ... 29 3.4
Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical pr... 29 4.5
AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha ki... 29 4.5
AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic tr... 29 4.5
Z77662-16|CAJ90504.1| 424|Caenorhabditis elegans Hypothetical p... 28 6.0
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 28 6.0
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 28 6.0
AL033512-5|CAA22073.2| 424|Caenorhabditis elegans Hypothetical ... 28 6.0
Z78544-4|CAB01762.3| 374|Caenorhabditis elegans Hypothetical pr... 28 7.9
>Z81057-1|CAB02914.2| 460|Caenorhabditis elegans Hypothetical
protein F10D11.2 protein.
Length = 460
Score = 34.3 bits (75), Expect = 0.091
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 4/95 (4%)
Frame = +2
Query: 461 LPSTSRSHDHDPSEGPLDVPSDEPIQIDLAGPLRYDNDDSNDTVLNII-INGPGHL---P 628
+PS + H P + +D D P+Q ++ + D N+ +N IN P + P
Sbjct: 119 IPSPRMTSPHQPEDNSID-DMDPPVQEEIEEKIENDTFGQNEVTVNQQPINNPMPVYPVP 177
Query: 629 AQSEDSNLTSPLTSFSDESTRQSINEDSNSCASIR 733
E +NL SP+ + S + +S + S+R
Sbjct: 178 ISHEPANLHSPIRNRSISPEKMDTTGNSGAGMSVR 212
>Z75710-9|CAB00024.2| 752|Caenorhabditis elegans Hypothetical
protein D1081.3 protein.
Length = 752
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = +2
Query: 281 ITDISDCCSY*PVQRVTQ*LRKMSQYPTAQSQ----GTESPGSPNIFEEPEQSFAAAEND 448
I + S C+ PV R + S P A +Q + P SPN+ P ++ N
Sbjct: 592 ICEFSGVCTKGPVGRPSSEASSSSNQPEATTQQIVQNSSDPNSPNVNTNPSKNRNTTSNS 651
Query: 449 NQIDLP 466
N I+LP
Sbjct: 652 NYIELP 657
>Z73970-2|CAA98243.2| 1560|Caenorhabditis elegans Hypothetical protein
C29A12.4 protein.
Length = 1560
Score = 31.1 bits (67), Expect = 0.85
Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Frame = +2
Query: 392 GSPNIFEEPEQSFAAAENDNQIDLPSTSRSHDHDPSEGPLDVPSDEPIQIDLAGPLRYDN 571
G+P EQ + +E D+++ + S D +P+E ++ + + ++ D
Sbjct: 1303 GAPQTTAVSEQVSSESEEDDELAEMMMAHSIDENPNEALIESLAPSCLSLEEQQSCFIDT 1362
Query: 572 DDSN---DTVLNIIINGPGHLPAQSEDSNLTSPLT-SFSDESTR 691
DDS VL + N P + D+ +T+ +T S + + TR
Sbjct: 1363 DDSTGFFSPVLPTVANFPTTRQTEHIDNEVTALITSSLAPQKTR 1406
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 31.1 bits (67), Expect = 0.85
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 380 TESPGSPNIFEEPEQSFAAAENDNQIDLPSTSRSHDHDPSEGPLDVP 520
TE P ++ + A + N++Q + PSTS H P+E + P
Sbjct: 1187 TEMPNVTQQYQAEQNHLAQSSNNSQYNAPSTSSQPQHFPTEPSIRQP 1233
>AF408755-1|AAO27834.1| 360|Caenorhabditis elegans unknown protein
protein.
Length = 360
Score = 31.1 bits (67), Expect = 0.85
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +2
Query: 422 QSFAAAENDNQIDLPSTSRSHDHDPSEGPLDVPSDEPIQIDLAGP-----LRYDNDDSND 586
+S ++ ++++D+PSTS H H V D Q+ + GP ++YD D +
Sbjct: 237 ESQQSSSQNHEMDMPSTSMDHYHHQDIDDGGVGDDIEQQVVVGGPSDEMAIQYDEDLAFQ 296
Query: 587 TVLNIIIN 610
+N ++N
Sbjct: 297 QHINSVLN 304
>AF047651-4|AAK67208.2| 516|Caenorhabditis elegans Hypothetical
protein C05D2.6a protein.
Length = 516
Score = 31.1 bits (67), Expect = 0.85
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +2
Query: 422 QSFAAAENDNQIDLPSTSRSHDHDPSEGPLDVPSDEPIQIDLAGP-----LRYDNDDSND 586
+S ++ ++++D+PSTS H H V D Q+ + GP ++YD D +
Sbjct: 393 ESQQSSSQNHEMDMPSTSMDHYHHQDIDDGGVGDDIEQQVVVGGPSDEMAIQYDEDLAFQ 452
Query: 587 TVLNIIIN 610
+N ++N
Sbjct: 453 QHINSVLN 460
>AF047651-3|AAZ82848.1| 515|Caenorhabditis elegans Hypothetical
protein C05D2.6b protein.
Length = 515
Score = 31.1 bits (67), Expect = 0.85
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +2
Query: 422 QSFAAAENDNQIDLPSTSRSHDHDPSEGPLDVPSDEPIQIDLAGP-----LRYDNDDSND 586
+S ++ ++++D+PSTS H H V D Q+ + GP ++YD D +
Sbjct: 392 ESQQSSSQNHEMDMPSTSMDHYHHQDIDDGGVGDDIEQQVVVGGPSDEMAIQYDEDLAFQ 451
Query: 587 TVLNIIIN 610
+N ++N
Sbjct: 452 QHINSVLN 459
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = +2
Query: 368 QSQGTESPGSPNIFEEPEQSFAAAENDNQIDLPS---TSRSHDHDP----SEGPLDVPSD 526
Q G SPG + E+P+ S +E+ PS S D P S GP+D PSD
Sbjct: 144 QPSGPPSPGPVDPSEDPQPSVEPSEDPQPSGPPSPGPVDPSEDPQPSGSSSPGPVD-PSD 202
Query: 527 EP 532
EP
Sbjct: 203 EP 204
>Z81134-7|CAD56602.1| 879|Caenorhabditis elegans Hypothetical
protein T28D6.5b protein.
Length = 879
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +2
Query: 374 QGTESPGSPNIFEEPEQSFAAA--ENDNQIDLPSTSRSHDHDPSEGPLDVP 520
+G S GSP +F P + E + Q+D+P DP PLD P
Sbjct: 630 KGLRSGGSP-VFARPRSRRGSRIDEMEGQLDIPELKPLRSDDPLAEPLDAP 679
>Z81134-6|CAB03450.2| 795|Caenorhabditis elegans Hypothetical
protein T28D6.5a protein.
Length = 795
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +2
Query: 374 QGTESPGSPNIFEEPEQSFAAA--ENDNQIDLPSTSRSHDHDPSEGPLDVP 520
+G S GSP +F P + E + Q+D+P DP PLD P
Sbjct: 630 KGLRSGGSP-VFARPRSRRGSRIDEMEGQLDIPELKPLRSDDPLAEPLDAP 679
>AL117202-32|CAD56611.1| 879|Caenorhabditis elegans Hypothetical
protein T28D6.5b protein.
Length = 879
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +2
Query: 374 QGTESPGSPNIFEEPEQSFAAA--ENDNQIDLPSTSRSHDHDPSEGPLDVP 520
+G S GSP +F P + E + Q+D+P DP PLD P
Sbjct: 630 KGLRSGGSP-VFARPRSRRGSRIDEMEGQLDIPELKPLRSDDPLAEPLDAP 679
>AL117202-31|CAD56610.1| 795|Caenorhabditis elegans Hypothetical
protein T28D6.5a protein.
Length = 795
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +2
Query: 374 QGTESPGSPNIFEEPEQSFAAA--ENDNQIDLPSTSRSHDHDPSEGPLDVP 520
+G S GSP +F P + E + Q+D+P DP PLD P
Sbjct: 630 KGLRSGGSP-VFARPRSRRGSRIDEMEGQLDIPELKPLRSDDPLAEPLDAP 679
>AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 1 protein.
Length = 1475
Score = 30.3 bits (65), Expect = 1.5
Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 7/118 (5%)
Frame = +2
Query: 374 QGTESPGSP-----NIFEEPEQSFAAAE-NDNQIDLPSTSRSHDHDPSEGPLDVPSDEPI 535
Q TESP S + EP++ F + N +L T HD PS P+D
Sbjct: 20 QQTESPFSAATPKSRLGREPKRIFGTSSGNMADSNLEETCLEHDSRPSSASSITPADNTS 79
Query: 536 QIDLAGPLRYDNDDSNDTVLNIIINGPG-HLPAQSEDSNLTSPLTSFSDESTRQSINE 706
+DL+ DD++ N PG ++ E S L S+ S Q +E
Sbjct: 80 LLDLSTVTALATDDASFVGTNDASITPGSNVDVNLEQSELYDTSNCTSNLSMVQESDE 137
>Z81523-11|CAB04247.2| 403|Caenorhabditis elegans Hypothetical
protein F32H2.7 protein.
Length = 403
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +2
Query: 587 TVLNIIINGPGHLPAQSEDSNLTSPLTSFSDESTR--QSINEDSNSCASIR 733
T+ N+ PG L AQS + NL S T+ S +T + ++D +C I+
Sbjct: 283 TISNLKAQSPGLLTAQSAEPNLLSTRTARSSSNTSLIDTESKDVQTCIEIQ 333
>Z69661-2|CAA93494.1| 925|Caenorhabditis elegans Hypothetical
protein F48F7.4 protein.
Length = 925
Score = 29.5 bits (63), Expect = 2.6
Identities = 26/109 (23%), Positives = 41/109 (37%), Gaps = 3/109 (2%)
Frame = +2
Query: 401 NIFE-EPEQSFAAAENDNQIDLPSTSRSHDHDPSEGPLDVPSDEPIQIDLAGPLRYDNDD 577
N+ E P+Q+F E S++ D +EG ++ DE + R +N+
Sbjct: 455 NVVEPRPQQNFVEKEKSGSQSTTRMSKNSKGDRNEGKRELTFDERLHKARMQKSRVENEG 514
Query: 578 SNDTV--LNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQSINEDSNS 718
N + P A S S LT E++ NE SN+
Sbjct: 515 VNGATSPTATTVAAPSSNVANSSTSALTPRSNGQKKETSGSVRNEGSNN 563
>Z69302-8|CAA93261.3| 420|Caenorhabditis elegans Hypothetical
protein F40F8.5 protein.
Length = 420
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/78 (25%), Positives = 29/78 (37%)
Frame = +2
Query: 482 HDHDPSEGPLDVPSDEPIQIDLAGPLRYDNDDSNDTVLNIIINGPGHLPAQSEDSNLTSP 661
H+H D PSD I R N D + T I G H +S+D + P
Sbjct: 139 HNHRVKRSIDDDPSDTTIDHTRHNHRRKRNQDDDPTDTTIDHTGHNHRRRRSDDHDPNDP 198
Query: 662 LTSFSDESTRQSINEDSN 715
+ + R+ N D +
Sbjct: 199 NVDHTGHNHRRKRNHDDD 216
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/80 (26%), Positives = 38/80 (47%)
Frame = +2
Query: 476 RSHDHDPSEGPLDVPSDEPIQIDLAGPLRYDNDDSNDTVLNIIINGPGHLPAQSEDSNLT 655
RS DHDP++ P+ + I + R +DD +DT ++ G H +SED +
Sbjct: 233 RSDDHDPND-----PNVDHIGHNHHRRKRNHDDDPSDTTID--HTGHNHRRRRSEDHDPN 285
Query: 656 SPLTSFSDESTRQSINEDSN 715
P + + R+ ++D +
Sbjct: 286 DPNVDHTGHNHRRRRDQDDD 305
>U40939-3|ABD63235.1| 960|Caenorhabditis elegans Hunchback like
(fly gap gene related)protein 1, isoform b protein.
Length = 960
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = +2
Query: 362 TAQSQGTESPGSPNIFEEPEQSFAAAENDNQIDLPSTSRSHDHDPSEGPLDVPSDEPIQI 541
TAQ G + E ++E+ N D+ S S+S +D ++ D SDE I +
Sbjct: 62 TAQQPGEKIHPDGGYVSPKEDGRKSSEHTNSYDV-SASQSPSNDGAQS--DSTSDEHIDV 118
Query: 542 DLAGPLRYDNDDSNDTV 592
+ D D+ + T+
Sbjct: 119 ECMTETEMDTDEKDSTI 135
>U40939-2|AAA81701.3| 982|Caenorhabditis elegans Hunchback like
(fly gap gene related)protein 1, isoform a protein.
Length = 982
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = +2
Query: 362 TAQSQGTESPGSPNIFEEPEQSFAAAENDNQIDLPSTSRSHDHDPSEGPLDVPSDEPIQI 541
TAQ G + E ++E+ N D+ S S+S +D ++ D SDE I +
Sbjct: 84 TAQQPGEKIHPDGGYVSPKEDGRKSSEHTNSYDV-SASQSPSNDGAQS--DSTSDEHIDV 140
Query: 542 DLAGPLRYDNDDSNDTV 592
+ D D+ + T+
Sbjct: 141 ECMTETEMDTDEKDSTI 157
>AF097737-1|AAD16170.1| 982|Caenorhabditis elegans
hunchback-related protein protein.
Length = 982
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = +2
Query: 362 TAQSQGTESPGSPNIFEEPEQSFAAAENDNQIDLPSTSRSHDHDPSEGPLDVPSDEPIQI 541
TAQ G + E ++E+ N D+ S S+S +D ++ D SDE I +
Sbjct: 84 TAQQPGEKIHPDGGYVSPKEDGRKSSEHTNSYDV-SASQSPSNDGAQS--DSTSDEHIDV 140
Query: 542 DLAGPLRYDNDDSNDTV 592
+ D D+ + T+
Sbjct: 141 ECMTETEMDTDEKDSTI 157
>AC006644-3|AAF39838.2| 491|Caenorhabditis elegans Hypothetical
protein F55A3.7 protein.
Length = 491
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +2
Query: 407 FEEPEQSFAAAENDNQIDLPSTSRSHDHDPSEGPLDVPSDEPIQIDLAGPLRYDNDDSND 586
FEE SF AE+DN+ + + S +DP E S D + ++DD ++
Sbjct: 417 FEEGGWSFLNAESDNEEAMDDSDDSDAYDPEEEDASAGSGSESDEDESEGEETESDDDDE 476
Query: 587 TVLN 598
L+
Sbjct: 477 GSLD 480
>Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical protein
F46C3.1 protein.
Length = 1077
Score = 28.7 bits (61), Expect = 4.5
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 3/108 (2%)
Frame = +2
Query: 410 EEPEQSFAAAENDNQIDLPSTSRSHDHDPSEGPLDVPSDEPIQID-LAGPLRYDNDDSND 586
E E+S A +E+D + D S S D PS DEP + + +G + + D +D
Sbjct: 773 ELKEESVAFSESDEESDTTEDSSSSDESPSSSSGSSIDDEPKKYNSSSGGIEF--VDGSD 830
Query: 587 TVLNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQSINE--DSNSCA 724
V N + A E+ ++ + E+ + E D+ CA
Sbjct: 831 DVDNEAVKETKKEIAVIEELSIHNRAMIVETENQELEVRERNDTGDCA 878
>Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical protein
F46C3.1 protein.
Length = 1077
Score = 28.7 bits (61), Expect = 4.5
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 3/108 (2%)
Frame = +2
Query: 410 EEPEQSFAAAENDNQIDLPSTSRSHDHDPSEGPLDVPSDEPIQID-LAGPLRYDNDDSND 586
E E+S A +E+D + D S S D PS DEP + + +G + + D +D
Sbjct: 773 ELKEESVAFSESDEESDTTEDSSSSDESPSSSSGSSIDDEPKKYNSSSGGIEF--VDGSD 830
Query: 587 TVLNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQSINE--DSNSCA 724
V N + A E+ ++ + E+ + E D+ CA
Sbjct: 831 DVDNEAVKETKKEIAVIEELSIHNRAMIVETENQELEVRERNDTGDCA 878
>AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha kinase
protein.
Length = 1077
Score = 28.7 bits (61), Expect = 4.5
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 3/108 (2%)
Frame = +2
Query: 410 EEPEQSFAAAENDNQIDLPSTSRSHDHDPSEGPLDVPSDEPIQID-LAGPLRYDNDDSND 586
E E+S A +E+D + D S S D PS DEP + + +G + + D +D
Sbjct: 773 ELKEESVAFSESDEESDTTEDSSSSDESPSSSSGSSIDDEPKKYNSSSGGIEF--VDGSD 830
Query: 587 TVLNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQSINE--DSNSCA 724
V N + A E+ ++ + E+ + E D+ CA
Sbjct: 831 DVDNEAVKETKKEIAVIEELSIHNRAMIVETENQELEVRERNDTGDCA 878
>AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic
translation initiationfactor 2 alpha kinase PEK protein.
Length = 1077
Score = 28.7 bits (61), Expect = 4.5
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 3/108 (2%)
Frame = +2
Query: 410 EEPEQSFAAAENDNQIDLPSTSRSHDHDPSEGPLDVPSDEPIQID-LAGPLRYDNDDSND 586
E E+S A +E+D + D S S D PS DEP + + +G + + D +D
Sbjct: 773 ELKEESVAFSESDEESDTTEDSSSSDESPSSSSGSSIDDEPKKYNSSSGGIEF--VDGSD 830
Query: 587 TVLNIIINGPGHLPAQSEDSNLTSPLTSFSDESTRQSINE--DSNSCA 724
V N + A E+ ++ + E+ + E D+ CA
Sbjct: 831 DVDNEAVKETKKEIAVIEELSIHNRAMIVETENQELEVRERNDTGDCA 878
>Z77662-16|CAJ90504.1| 424|Caenorhabditis elegans Hypothetical
protein Y49A3A.1 protein.
Length = 424
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 369 CAVGYWLIFRSHWVTLCTGQ 310
C + L + +HW T CTGQ
Sbjct: 197 CLISVSLFYTAHWSTYCTGQ 216
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 410 EEPEQSFAAAENDNQIDLPSTSRSHDHDPSEGPLDVPSDEPIQID 544
E+PE S A+ D D+ S S + D V DEPI+ +
Sbjct: 854 EDPEYSAASPSEDEDDDIGSFVVSDNEDDDADSFVVGDDEPIEYE 898
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 410 EEPEQSFAAAENDNQIDLPSTSRSHDHDPSEGPLDVPSDEPIQID 544
E+PE S A+ D D+ S S + D V DEPI+ +
Sbjct: 854 EDPEYSAASPSEDEDDDIGSFVVSDNEDDDADSFVVGDDEPIEYE 898
>AL033512-5|CAA22073.2| 424|Caenorhabditis elegans Hypothetical
protein Y49A3A.1 protein.
Length = 424
Score = 28.3 bits (60), Expect = 6.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 369 CAVGYWLIFRSHWVTLCTGQ 310
C + L + +HW T CTGQ
Sbjct: 197 CLISVSLFYTAHWSTYCTGQ 216
>Z78544-4|CAB01762.3| 374|Caenorhabditis elegans Hypothetical
protein K04G11.5 protein.
Length = 374
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 128 FRYLRTLIHVLILVGFNVYCVLFLVNF 48
+RY R H++I + C+LFL+ F
Sbjct: 63 WRYCRNWFHLIIECNWRTICILFLLGF 89
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,307,186
Number of Sequences: 27780
Number of extensions: 361615
Number of successful extensions: 1268
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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