Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0188
(735 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 40 4e-04
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 36 0.006
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 35 0.010
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 35 0.014
SPAC17G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 34 0.024
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 33 0.042
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 33 0.042
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 32 0.098
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 32 0.098
SPAC57A10.10c |sla1||La protein homolog|Schizosaccharomyces pomb... 31 0.13
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 31 0.17
SPCP1E11.08 |||ribosome biogenesis protein Nsa2 |Schizosaccharom... 30 0.30
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 30 0.30
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 30 0.30
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 29 0.52
SPAC144.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 29 0.91
SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|... 29 0.91
SPACUNK12.02c |cmk1||calcium/calmodulin-dependent protein kinase... 28 1.2
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 1.6
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 28 1.6
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 28 1.6
SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|c... 28 1.6
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 28 1.6
SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogam... 27 2.8
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 27 2.8
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 27 2.8
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb... 27 2.8
SPCC1393.02c |||non-specific DNA binding protein Spt2 |Schizosac... 27 2.8
SPAC1782.03 |||microfibrillar-associated protein family protein|... 27 3.7
SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase Ogm4|Schizo... 26 4.8
SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr ... 26 4.8
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 26 6.4
SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain pro... 26 6.4
SPCC1919.14c |bdp1||transcription factor TFIIIB complex subunit ... 25 8.5
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 8.5
SPAC27E2.06c |||methionine-tRNA ligase, mitochondrial|Schizosacc... 25 8.5
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 39.9 bits (89), Expect = 4e-04
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 5/133 (3%)
Frame = +3
Query: 3 ADKRDENLKKMIER--LREHEEQVRKVRAGNQ--EKFQQLESAIQEKLQQAADRRLLIEA 170
A +R L + IE R+ E +++K+R + +K +QL+ A +E+ Q+ RL +A
Sbjct: 565 AQQRQAKLLEEIEEENKRKQERELKKIREKEKKRDKKKQLKLAKEEERQRREAERLAEQA 624
Query: 171 EQREKLRNHNIKLAEVRSAATAKVEEITKDIE-NKLTTAELNREKEIQKKLDFVKKEERR 347
Q+ + + R K E+ K E + E ++KE +KKL ++E R
Sbjct: 625 AQKALEAKRQEEARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKLKKQQQEADR 684
Query: 348 AELVRQNKSARTE 386
++ R+ + E
Sbjct: 685 EKMAREQRLREEE 697
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 35.9 bits (79), Expect = 0.006
Identities = 27/111 (24%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Frame = +3
Query: 27 KKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIK 206
+K +++ R EE++R+ A ++ ++ + QEK + ++ + ++ EKL I+
Sbjct: 77 EKKLQKQRAQEERIRQKEAERLKREKERQQREQEKKLREQEKIAAKKMKELEKLEKERIR 136
Query: 207 LAEVRSAATAKVEEITKDIENKLTTAE--LNREKEIQKKLD--FVKKEERR 347
L E + + +++ + E + E LN+E++ Q KL+ F K E+R
Sbjct: 137 LQEQQRRKEERDQKLREKEEAQRLRQEQILNKERQ-QLKLNNFFTKGVEKR 186
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 35.1 bits (77), Expect = 0.010
Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Frame = +3
Query: 3 ADKRDENLKKMIERLREHEEQVRKVRAGNQ---EKFQQLESAIQEKLQQAADRRLLIEAE 173
AD R E L+ + L E+Q++++ NQ E +Q+ S+I+ + A R + E E
Sbjct: 189 ADSR-EQLETKCKELAAAEQQLQELSVHNQQLEESIKQVSSSIELEKINAEQRLQISELE 247
Query: 174 QREKLRNHNIKLAEVRSAATAKVEEITKDIENKLTTAELNREKEIQKKLD 323
+ + + I+ + ++E D+E+KL E R+K +L+
Sbjct: 248 KLKAAQEERIEKLSSNNRNVEILKEEKNDLESKLYRFEEYRDKVATLELE 297
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 34.7 bits (76), Expect = 0.014
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Frame = +3
Query: 6 DKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREK 185
++ + L + +R++E EEQ +K + N I + ++Q + +L + +
Sbjct: 1608 EELENQLNEKSQRIKELEEQAQKNSSENTH------DNIDDMIKQQVEEKLKENSANFDV 1661
Query: 186 LRNHNIKLAEVRSAATAKV-EEITKDIENKLTTAELNREKEIQKKLDFVKKEERRAELVR 362
+ E RS A V E+ T+D++NK+T E E + K+L +K + V
Sbjct: 1662 KLKKVVAETEFRSKAKISVYEKKTRDLQNKITQLEETIE-NLNKQLSNPEKTDESTSSVT 1720
Query: 363 QNK 371
+ K
Sbjct: 1721 ETK 1723
Score = 32.3 bits (70), Expect = 0.074
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Frame = +3
Query: 18 ENLKKMIERLREHE--------EQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAE 173
ENLKK +E+ E+ ++ + +F L+ + K ++ + EA
Sbjct: 1397 ENLKKEVEQANTKNTRLAAAWNEKCENLKKSSLTRFAHLKQELTNKNKELTSKNAENEAM 1456
Query: 174 QRE--KLRNHNIKLAEVRSAATAKVEEITKDIENKLTTAELNREKEI 308
Q+E L++ N +L E +A++ E+ITK+ +L + + EKE+
Sbjct: 1457 QKEIESLKDSNHQLQE---SASSDAEQITKEQFEQLKSEKERTEKEL 1500
>SPAC17G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 433
Score = 33.9 bits (74), Expect = 0.024
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Frame = +3
Query: 12 RDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRL---LIEAEQRE 182
+D +L+ +E L + E +++ + + +E A QE LQQ R+ L E EQ
Sbjct: 19 QDHSLQMALEELNQQIEVIQRQEEQLALRKKAIEDARQEVLQQIQHRKFRQYLHEREQEA 78
Query: 183 KLRNHNIKLAEVRSAATAKVEE-ITKDIENKLTTAELNREKEIQKKL 320
+L+ + ++ + R A V I K E++ REK +K L
Sbjct: 79 RLQEYYLEQLQERRAFENVVRTIIRKRFEDEERERAHRREKAARKLL 125
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 33.1 bits (72), Expect = 0.042
Identities = 31/142 (21%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Frame = +3
Query: 9 KRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQ---------AADRRLL 161
K +E L K E +E + ++ +R +E ++ + A+Q+K+ Q A +R+ L
Sbjct: 24 KMEELLSKQREECKELQSKITNLRKQLKEGNKKQKRALQQKISQMEADLSQKHATERQKL 83
Query: 162 IEAE------QREKLRNHNIKLAEVRSAATAKVEEITKDIENKLTTAELNREKEIQKKLD 323
+ + Q+E L N ++ E TA+ + + K T + ++ ++K
Sbjct: 84 DKGDEETNETQQEDLLNTLLQQMEDTKITTAEKSSVQSSLNTKENTPQQPKKSRNRQK-- 141
Query: 324 FVKKEERRAELVRQNKSARTET 389
+ E R+AE+ + ++ A E+
Sbjct: 142 -ERLERRKAEMKKMSEQAELES 162
Score = 29.1 bits (62), Expect = 0.69
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 6 DKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQ-LESAIQEKLQQAADRRLLIEAEQRE 182
++R +KKM E+ E++ ++ ++KF + LE A + AD L + +
Sbjct: 145 ERRKAEMKKMSEQAELESEKMADLKNEEKKKFSKILEEAGLVAVDIPADGNCLFASISHQ 204
Query: 183 KLRNHNIKL 209
+HN+KL
Sbjct: 205 LNYHHNVKL 213
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 33.1 bits (72), Expect = 0.042
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Frame = +3
Query: 27 KKMIERLREHEEQVRKVRAGN--QEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHN 200
K E R+ EE+ R N +E +Q + +EK ++ A+ + EAE++ K
Sbjct: 540 KAEAEAKRKAEEKARLEAEENAKREAEEQAKREAEEKAKREAEEKAKREAEEKAKREAEE 599
Query: 201 IKLAEVRSAATAKVEEITK-DIENKL---TTAELNREKEIQKKLDFVKKEERRAE 353
E A + EE K + E K + RE E + K + +K +R AE
Sbjct: 600 NAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAE 654
Score = 32.7 bits (71), Expect = 0.056
Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 7/119 (5%)
Frame = +3
Query: 18 ENLKKMIERLREHEEQVRKVRAGNQEKFQQLESA---IQEKLQQAADRRLLIEAEQREKL 188
E +K E+ R E+ K A Q K + E A +EK ++ A+ + EAE+ K
Sbjct: 544 EAKRKAEEKARLEAEENAKREAEEQAKREAEEKAKREAEEKAKREAEEKAKREAEENAKR 603
Query: 189 RNHNIKLAEVRSAATAKVEEITK-DIENKL---TTAELNREKEIQKKLDFVKKEERRAE 353
E A + EE K + E K + RE E + K + +K +R AE
Sbjct: 604 EAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAE 662
Score = 31.9 bits (69), Expect = 0.098
Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 5/121 (4%)
Frame = +3
Query: 39 ERLREHEEQVRKVRAGNQEKFQQLESA---IQEKLQQAADRRLLIEAEQREKLRNHNIKL 209
E+ + E+ K A + K + E+A +EK ++ A+ + EAE++ K
Sbjct: 575 EKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAEEKAKREAEEKAKREAEEKAK 634
Query: 210 AEVRSAATAKVEEITK-DIENKL-TTAELNREKEIQKKLDFVKKEERRAELVRQNKSART 383
E A + EE K + E K AE N ++E ++K +E + E + K
Sbjct: 635 REAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAEENAKREAEEKVKRETE 694
Query: 384 E 386
E
Sbjct: 695 E 695
Score = 31.9 bits (69), Expect = 0.098
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 4/112 (3%)
Frame = +3
Query: 48 REHEEQVRKV--RAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAEVR 221
RE EE ++ +E ++ + +EK ++ A+ + EAE++ K E
Sbjct: 595 REAEENAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAE 654
Query: 222 SAATAKVEEITK-DIENKL-TTAELNREKEIQKKLDFVKKEERRAELVRQNK 371
A + EE K + E K AE N ++E ++K+ +E + + + K
Sbjct: 655 EKAKREAEENAKREAEEKAKREAEENAKREAEEKVKRETEENAKRKAEEEGK 706
Score = 29.9 bits (64), Expect = 0.39
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
Frame = +3
Query: 15 DENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRN 194
+EN K+ E + E + + R ++ ++ E EK ++ A+ + EAE++ K
Sbjct: 598 EENAKREAEEKAKREAEEKAKREAEEKAKREAE----EKAKREAEEKAKREAEEKAKREA 653
Query: 195 HNIKLAEVRSAATAKVEEITK--DIENKLTTAELNREKEIQKKLDFVKKEERRAE 353
E A + EE K EN AE ++E ++ +EE + E
Sbjct: 654 EEKAKREAEENAKREAEEKAKREAEENAKREAEEKVKRETEENAKRKAEEEGKRE 708
Score = 27.1 bits (57), Expect = 2.8
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 11/115 (9%)
Frame = +3
Query: 42 RLREHEEQVRK--VRAGNQEKFQQLESA-----IQEKLQQAADRRLLIEAEQREKLRNHN 200
++ E E RK ++ Q++ Q+ A +EK + A+ EAE++ K
Sbjct: 516 QISEEEASQRKDAIKLAIQQRIQEKAEAEAKRKAEEKARLEAEENAKREAEEQAKREAEE 575
Query: 201 IKLAEVRSAATAKVEEITK--DIENKLTTAE--LNREKEIQKKLDFVKKEERRAE 353
E A + EE K EN AE RE E + K + +K +R AE
Sbjct: 576 KAKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAEEKAKREAEEKAKREAE 630
Score = 26.6 bits (56), Expect = 3.7
Identities = 25/116 (21%), Positives = 47/116 (40%), Gaps = 2/116 (1%)
Frame = +3
Query: 48 REHEEQVRKV--RAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAEVR 221
RE EE+ ++ +E ++ + +EK ++ A+ + EAE+ K E
Sbjct: 619 REAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKREAE 678
Query: 222 SAATAKVEEITKDIENKLTTAELNREKEIQKKLDFVKKEERRAELVRQNKSARTET 389
A + EE K + T R+ E + K + K E ++ + A +T
Sbjct: 679 ENAKREAEEKVK----RETEENAKRKAEEEGKREADKNPEIKSSAPLASSEANVDT 730
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 31.9 bits (69), Expect = 0.098
Identities = 26/107 (24%), Positives = 59/107 (55%)
Frame = +3
Query: 18 ENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNH 197
E +++I LRE E ++ A + +QLES +Q ++AA ++L E+ + H
Sbjct: 1247 ERNEEVITELREKIETLKTDLANFRLNKEQLESQLQ--TEKAAVKKL---ENSNEEYKRH 1301
Query: 198 NIKLAEVRSAATAKVEEITKDIENKLTTAELNREKEIQKKLDFVKKE 338
N ++ +++T+ + ++ ++N+L + E N +E+ +++ +K E
Sbjct: 1302 NQEILLSLNSSTSTSSDASR-LKNELVSKE-NLIEELNQEIGHLKSE 1346
Score = 27.5 bits (58), Expect = 2.1
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Frame = +3
Query: 12 RDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQ--REK 185
+ E K E E E + +KV Q++ +L S I ++LQ+ LL + Q +++
Sbjct: 1485 KSEGTSKDTEIPNEEEMERKKVM---QQEVLRLRSRIAKELQK---NELLRKQNQVLQDQ 1538
Query: 186 LRNHNIKLAEVRSAATAKVEEITKDIENKLTTAEL 290
++ + A +A V TKD+EN T E+
Sbjct: 1539 VKALQETVVSSEEAESASVHADTKDLENLKKTEEM 1573
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 31.9 bits (69), Expect = 0.098
Identities = 30/131 (22%), Positives = 66/131 (50%), Gaps = 3/131 (2%)
Frame = +3
Query: 3 ADKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQA---ADRRLLIEAE 173
A K L K ++ ++ + ++ V +Q K + + + +++ QA A+ +L E
Sbjct: 895 ATKTASTLSKELKTVKSENDSLKSVSNDDQNKEKSVNNEKFKEVSQALAEANEKLNARDE 954
Query: 174 QREKLRNHNIKLAEVRSAATAKVEEITKDIENKLTTAELNREKEIQKKLDFVKKEERRAE 353
+ E+L+ I L A+ ++ + KD +N+ + ++ KE++KKL + +E
Sbjct: 955 EIERLKVDIIGLQN----ASLNMQSL-KDSDNRTISDLESKNKELEKKLK--EADEYWLL 1007
Query: 354 LVRQNKSARTE 386
+V + +S RT+
Sbjct: 1008 IVEELESKRTK 1018
>SPAC57A10.10c |sla1||La protein homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 298
Score = 31.5 bits (68), Expect = 0.13
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Frame = +3
Query: 171 EQREKLRNHNIKLAEVRSAATAKVEEITKDIEN-KLTTAELNREKEIQKKLDFVKKEER- 344
EQ+E++++ + K + S+ K EE K +E+ K TT+E +E+ +KK D KK+
Sbjct: 5 EQKEEIKDISSK--QENSSEVPKAEEAGKVVESQKDTTSEEKKEETTEKKEDDGKKDLSF 62
Query: 345 -RAELVRQ 365
AE+++Q
Sbjct: 63 DEAEVLKQ 70
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 31.1 bits (67), Expect = 0.17
Identities = 24/113 (21%), Positives = 60/113 (53%), Gaps = 4/113 (3%)
Frame = +3
Query: 24 LKKMIERLR---EHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRN 194
L+KM+E R E E+++R+ A E+ ++L + + ++A ++ E +++E+++
Sbjct: 250 LQKMLEEKRAREEEEQRIREEEARIAEEEKRLAEVEEARKEEARLKKKEKERKKKEEMKA 309
Query: 195 HNIKLAEVRSAATAKVE-EITKDIENKLTTAELNREKEIQKKLDFVKKEERRA 350
L++ + A + + + +E+ + A L+ ++ QK + KK+ R+
Sbjct: 310 QGKYLSKKQKEQQALAQRRLQQMLESGVRVAGLSNGEKKQKPVYTNKKKSNRS 362
>SPCP1E11.08 |||ribosome biogenesis protein Nsa2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 260
Score = 30.3 bits (65), Expect = 0.30
Identities = 16/91 (17%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Frame = +3
Query: 6 DKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRL--LIEAEQR 179
+KR + +M + +++HEE+ R + + + + + ++ Q++ + L ++ +++
Sbjct: 52 EKRRKEKIQMKKTIKQHEERNATQRGSDAQTQGAVPTYLLDREQESQAKMLSSAVKQKRK 111
Query: 180 EKLRNHNIKLAEVRSAATAKVEEITKDIENK 272
EK +++ L +VR A ++ ++ + ++K
Sbjct: 112 EKAAKYSVPLPQVRGVAEEEMFKVIRTGKSK 142
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 30.3 bits (65), Expect = 0.30
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Frame = +3
Query: 6 DKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREK 185
++RD L+ ++ L + +R + + + + L + +E ++ RLL +
Sbjct: 435 EERDV-LESKLQTLEDDNNSLRLMTSSLGNQIESLRTQNREIDEEKNHLRLLASKNSDKA 493
Query: 186 LRNHNIKLAEVRSAATAKVEEITKDIENKLTTA-ELNREKE-IQKKLDFVKKEERRA--E 353
L NI+L EV T ++E + N L +L E E + K+D + KE+ R E
Sbjct: 494 LAETNIRLQEV----TKELETLRMKNSNDLNEIHDLREENEGLTLKIDSITKEKDRLINE 549
Query: 354 LVRQNKS 374
L ++ KS
Sbjct: 550 LEQRIKS 556
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 30.3 bits (65), Expect = 0.30
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 11/123 (8%)
Frame = +3
Query: 9 KRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEA------ 170
+R + L ++ E ++V +E+ QL + +QE+ A ++ +L+E
Sbjct: 839 RRKDALINNLQNQLESTKEVANELTITKERVLQLTNDLQEEQALAHEKDILVERANSRVE 898
Query: 171 ---EQREKLRNHNIKLAEVRSAATAKVEEITKDIENKLTTAEL--NREKEIQKKLDFVKK 335
E+ L N E A+ + I +D+ NK T + ++KKL +KK
Sbjct: 899 VVHERLSSLENQVTIADEKYEFLYAEKQSIEEDLANKQTEISYLSDLSSTLEKKLSSIKK 958
Query: 336 EER 344
+E+
Sbjct: 959 DEQ 961
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 29.5 bits (63), Expect = 0.52
Identities = 19/68 (27%), Positives = 37/68 (54%)
Frame = +3
Query: 9 KRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKL 188
++DE K+ ++ R+ EQV + +EK+ +LE + +LQ A R ++A+ +
Sbjct: 436 EKDEASKERLKAARKEAEQVEEETRPIREKY-ELEKSRGSELQDAKRRLDELKAKAEDAE 494
Query: 189 RNHNIKLA 212
R ++ LA
Sbjct: 495 RRNDFTLA 502
>SPAC144.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 112
Score = 28.7 bits (61), Expect = 0.91
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +3
Query: 129 KLQQAADRRLLIEAEQR--EKLRNHNIKLAEVRSAATAKVEEITKDIENKLTTAELNREK 302
K ++ + + L++ +QR EK +N NI + T E+I + I K T + R++
Sbjct: 35 KKERPFEPKKLVQQQQRLKEKKKNENIIYLKKTMRVTPSEEKIHEMINQKRETKKRKRKQ 94
Query: 303 EIQKKLDFVKKEERRAEL 356
+ + D+ EE EL
Sbjct: 95 KKKNDDDYGVFEEDMLEL 112
>SPCC736.07c |||cell polarity protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 699
Score = 28.7 bits (61), Expect = 0.91
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 189 RNHNIKLAEVRSAATAKVEEITKDIENKLTTAELNREKEIQKKLDFVKKEERRA 350
R + K++E + A AKVEEI+ EL R+K I +++K EE +A
Sbjct: 616 RTPSDKISESKEAFDAKVEEISDQRAISQRYYEL-RKKMIDNTGEYIKDEEEQA 668
>SPACUNK12.02c |cmk1||calcium/calmodulin-dependent protein kinase
Cmk1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 234 AKVEEITKDIENKLTTAELNREKEIQKKLDFVKKE 338
A V E NK+ A++ +K ++KK DFVK E
Sbjct: 43 ATVREAVHIETNKMYAAKIMNKKMMEKKQDFVKNE 77
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 27.9 bits (59), Expect = 1.6
Identities = 27/120 (22%), Positives = 58/120 (48%), Gaps = 4/120 (3%)
Frame = +3
Query: 9 KRDENLKKMIERLREHE----EQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQ 176
KR+++L+ + ++ EHE E+ K+ N E F +E+ +++A ++ ++ +
Sbjct: 235 KREKDLENRLLKVEEHEKSLNERATKLSEAN-ENFNNRFKEFEER-EKSAIKQNKEQSSE 292
Query: 177 REKLRNHNIKLAEVRSAATAKVEEITKDIENKLTTAELNREKEIQKKLDFVKKEERRAEL 356
K N + E+ ++ KV +I +E +L + R K ++F + + R EL
Sbjct: 293 GSKTANQTHEQKELINSLEKKVSDIA--LEKQLLEEAVERYK--LAMVEFAECQRRLKEL 348
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 27.9 bits (59), Expect = 1.6
Identities = 27/122 (22%), Positives = 56/122 (45%)
Frame = +3
Query: 9 KRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKL 188
K D L+ +RL + EE+V+ + AG+ A + + D++L+ + + +
Sbjct: 976 KLDGVLEARSKRLSQLEERVKLLGAGSTSSIPNSPRASKRVSLDSEDKKLVPASPDKSAV 1035
Query: 189 RNHNIKLAEVRSAATAKVEEITKDIENKLTTAELNREKEIQKKLDFVKKEERRAELVRQN 368
+ L + + +++E +L E+E +K+ D + ER +L+RQN
Sbjct: 1036 QRGITALKRDAEGMSHIWQLRLREME-----FQLKAEQEGRKR-DKLGARERLQDLIRQN 1089
Query: 369 KS 374
+S
Sbjct: 1090 RS 1091
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +3
Query: 93 EKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAEVRSAATAK-VEEITKDIEN 269
++ QLE A+ EKL + + ++E ++ + N EV++ T V + + D+++
Sbjct: 1089 KRVDQLEEALNEKLARLVGEQ-MVEGDKEKDKTNEEKNKDEVKAEMTQPVVNQDSHDLQD 1147
Query: 270 KLTT 281
+L T
Sbjct: 1148 QLAT 1151
>SPAC890.02c |alp7|mia1|TACC homolog |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 27.9 bits (59), Expect = 1.6
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 57 EEQVRKVRAGNQEKFQQLESAIQEK 131
EE+ R ++A NQ +QLE AIQE+
Sbjct: 374 EEERRALKADNQTLQKQLEKAIQER 398
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +3
Query: 93 EKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAEVRSAATAK-VEEITKDIEN 269
++ QLE A+ EKL + + ++E ++ + N EV++ T V + + D+++
Sbjct: 1089 KRVDQLEEALNEKLARLVGEQ-MVEGDKEKDKTNEEKNKDEVKAEMTQPVVNQDSHDLQD 1147
Query: 270 KLTT 281
+L T
Sbjct: 1148 QLAT 1151
>SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogamy
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 27.1 bits (57), Expect = 2.8
Identities = 21/98 (21%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = +3
Query: 39 ERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHN-IKLAE 215
E + + +E + ++ E F + S ++++A + + EK + N I L+
Sbjct: 197 EGMVQQKEILSTIKQLKSEIFD-INSFFANFIEESAGYSNSLIEKLNEKFTSENAIALSA 255
Query: 216 VRSAATAKVEEITKDIENKLTTAELNREKEIQKKLDFV 329
+ + + K I+N +TT E + ++ +Q +DFV
Sbjct: 256 IGKYTSEFSAFMEKRIKNLITTTEDSLQQSVQSNIDFV 293
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 27.1 bits (57), Expect = 2.8
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +3
Query: 276 TTAELNREKEIQKKLDFVKKEERRAELVRQNKS 374
T A +R+KE Q+K +++KK ++ A + + N++
Sbjct: 444 TRASYDRQKE-QRKKEYIKKVKKEASIKKHNEA 475
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 27.1 bits (57), Expect = 2.8
Identities = 26/115 (22%), Positives = 52/115 (45%)
Frame = +3
Query: 9 KRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKL 188
+ D +KK+ R+ E E V++ + ++ E I + D+ L E + L
Sbjct: 345 ENDLTVKKLKRRISELEMAVKEYESEKSYSEKEYEEKISSLRIELEDK--LAEIDM---L 399
Query: 189 RNHNIKLAEVRSAATAKVEEITKDIENKLTTAELNREKEIQKKLDFVKKEERRAE 353
RN +K + + K+EE++K + + + E N + + +++ ERR E
Sbjct: 400 RNKLLKEEHKHHSTSEKLEELSKYVAS-IQDKERNNGQNALELQARIQQLERRNE 453
>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 209
Score = 27.1 bits (57), Expect = 2.8
Identities = 22/83 (26%), Positives = 40/83 (48%)
Frame = +3
Query: 12 RDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLR 191
R++ LK+ ++L + E V + K + E I +++ + R+L + +QRE+ R
Sbjct: 100 RNQLLKE--KKLSPNSEDVHSDQFLFDLKVRWREILIADEVARRRARQLDLANQQREQAR 157
Query: 192 NHNIKLAEVRSAATAKVEEITKD 260
I R + KV E T+D
Sbjct: 158 QDEIARERKRRVESEKVWEETRD 180
>SPCC1393.02c |||non-specific DNA binding protein Spt2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 406
Score = 27.1 bits (57), Expect = 2.8
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 1/107 (0%)
Frame = +3
Query: 60 EQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAEVRSAATAK 239
EQ+RK + + + E Q KLQ+ + R E EQR R ++ + ++
Sbjct: 26 EQLRKAQIREKAREITEERNRQRKLQRERELRQKYEEEQR---RQQAMEAKRIAASTRQT 82
Query: 240 VEEITKDIENKLTTAELNREKEIQ-KKLDFVKKEERRAELVRQNKSA 377
E E E+ + ++ KK + K EL+RQ SA
Sbjct: 83 SERPPLSAEEAKRIREVKEKDRLESKKNERQGKPRSYNELLRQASSA 129
>SPAC1782.03 |||microfibrillar-associated protein family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 355
Score = 26.6 bits (56), Expect = 3.7
Identities = 27/112 (24%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Frame = +3
Query: 63 QVRKVRA-GNQEKFQQLESAIQEK-LQQAADRRLLI-EAEQREKLRNHNIKLAEVRSAAT 233
+V K RA N+E + L+ +K L++ R LL+ E + +L N + +
Sbjct: 134 KVIKNRAKANEEDTEVLKKVTSQKILEETIKRELLLKETKNNNELLNDIDDTDGIDPQSE 193
Query: 234 A---KVEEITKDIENKLTTAELNREKEIQKKLDFVKKEERRAELVRQNKSAR 380
K+ + + +K + EL REK ++ + EER A+ ++ +++R
Sbjct: 194 YELWKLRHLLRKKRDKEKSLELEREKMAIEERRLMNSEEREAQDLKDAEASR 245
>SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase
Ogm4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 26.2 bits (55), Expect = 4.8
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 273 LTTAELNREKEIQKKLDFVKKE-ERRAELVRQN 368
L + L +EK+I KKL F KK E + + RQN
Sbjct: 532 LKDSRLKKEKKIPKKLPFWKKYLELQLTMFRQN 564
>SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 377
Score = 26.2 bits (55), Expect = 4.8
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = +3
Query: 285 ELNREKEIQKKLDFVKKEERRAELVRQN 368
+ N+E E Q D+V ++ R +L+++N
Sbjct: 81 DANKEPEKQSTSDYVSRKNRHMQLIKKN 108
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 25.8 bits (54), Expect = 6.4
Identities = 23/101 (22%), Positives = 41/101 (40%)
Frame = +3
Query: 51 EHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAEVRSAA 230
E + + + +Q F + + QE+ + + IEAE++ + E+
Sbjct: 86 EEQNLIEQSITESQRIFSEKQRLEQERFNRELLEKKRIEAERQRLKDEEERRKKELMEKE 145
Query: 231 TAKVEEITKDIENKLTTAELNREKEIQKKLDFVKKEERRAE 353
+ E I E K E R K Q+++D +KEE E
Sbjct: 146 KKEKERIRLIEEQKHKENEQRRLK--QEQIDAKRKEEEARE 184
Score = 25.8 bits (54), Expect = 6.4
Identities = 25/116 (21%), Positives = 54/116 (46%)
Frame = +3
Query: 18 ENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNH 197
E KK ER+R EEQ K + Q + +Q + + K ++A ++R+ E + + +
Sbjct: 143 EKEKKEKERIRLIEEQ--KHKENEQRRLKQEQIDAKRKEEEAREKRMK-ETFKDDPEEDS 199
Query: 198 NIKLAEVRSAATAKVEEITKDIENKLTTAELNREKEIQKKLDFVKKEERRAELVRQ 365
N+ + + T V I++ + +L ++++I +L + K + + Q
Sbjct: 200 NMAWSIIHKIKTEVVAPISE--KKELKNYCFTQKRKITPRLGQITKSNSQIMKITQ 253
>SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 240
Score = 25.8 bits (54), Expect = 6.4
Identities = 14/62 (22%), Positives = 34/62 (54%)
Frame = +3
Query: 6 DKRDENLKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIEAEQREK 185
+++ N K + + E + +RK++ +Q + + L+ Q+K + A R+ ++ +R+K
Sbjct: 69 EEKKTNYKILQKSNDETAQAMRKMQ--DQARLRDLQKIRQQKAEDAEQRKKILAEIERDK 126
Query: 186 LR 191
R
Sbjct: 127 KR 128
>SPCC1919.14c |bdp1||transcription factor TFIIIB complex subunit
Bdp1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 507
Score = 25.4 bits (53), Expect = 8.5
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +3
Query: 24 LKKMIERLREHEEQVRKVRAGNQEKFQQLESAIQEKLQQAADRRLLIE-AEQREKLRNHN 200
+KK I+ + E+ + KV +E ++L+ I+E ++ +RR IE AEQR+ + NH
Sbjct: 423 IKKPID-MEEYSKVSGKVFRPVEEMEKELQK-IRENFEE--ERRRAIEVAEQRQLIVNHE 478
Query: 201 IK 206
++
Sbjct: 479 LE 480
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 25.4 bits (53), Expect = 8.5
Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = +3
Query: 102 QQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAEVRSAATAKVEEITKDIENKLTT 281
+ L +++ EKL + L+E EQ+ + +SAA + + ++K+ +NK
Sbjct: 3993 EDLSNSLNEKLWDEPNEEDLLETEQK----------SNEQSAANNESDLVSKEDDNKALE 4042
Query: 282 AELNREKEIQKKL-DFVKKEERRAELVRQNKS 374
+ +EKE ++++ D V ++ +++N S
Sbjct: 4043 DKDRQEKEDEEEMSDDVGIDDEIQPDIQENNS 4074
>SPAC27E2.06c |||methionine-tRNA ligase,
mitochondrial|Schizosaccharomyces pombe|chr 1|||Manual
Length = 539
Score = 25.4 bits (53), Expect = 8.5
Identities = 18/73 (24%), Positives = 32/73 (43%)
Frame = +3
Query: 120 IQEKLQQAADRRLLIEAEQREKLRNHNIKLAEVRSAATAKVEEITKDIENKLTTAELNRE 299
+ + L D LIE + +R + +K + S + +EE+ KD E+ L +
Sbjct: 327 MSKSLGNVVDPFWLIEKYGVDTIRYYLLKRGRLTSDSNFDIEELEKDEEHDLRRSLGVLL 386
Query: 300 KEIQKKLDFVKKE 338
+Q K F+ E
Sbjct: 387 SRLQSKKLFISNE 399
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,072,845
Number of Sequences: 5004
Number of extensions: 31602
Number of successful extensions: 172
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 170
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 347244562
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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