Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0187
         (370 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0757 + 22845825-22846032,22848331-22848498,22848929-228494...    27   4.6  

>12_02_0757 +
           22845825-22846032,22848331-22848498,22848929-22849434,
           22849890-22850151,22851708-22851942,22854240-22854496,
           22854592-22854635
          Length = 559

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 15/60 (25%), Positives = 29/60 (48%)
 Frame = +2

Query: 107 MPVTFKEIAPNHNIPEKWKEIVLNTGGTHSTLQDIKLPQKAGGYWYKDSTKFYTRNRFIY 286
           MP+ F  +  N +   +   ++   GG +S +    LP   GG++++ ST    +  +IY
Sbjct: 407 MPLMFCGLVVNGSAQVR---LIDTEGGRYSVIHHGSLPNITGGFYFRASTDPSLKGCYIY 463


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,683,807
Number of Sequences: 37544
Number of extensions: 159253
Number of successful extensions: 341
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 341
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 576724416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)