Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0186
(722 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF077534-2|AAC26284.1| 648|Caenorhabditis elegans Temporarily a... 126 2e-29
AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily a... 126 2e-29
AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical... 42 3e-04
U32305-1|AAK18854.2| 469|Caenorhabditis elegans Hypothetical pr... 38 0.010
L08403-3|AAT92076.1| 335|Caenorhabditis elegans Hypothetical pr... 37 0.013
U97407-8|AAN84851.1| 397|Caenorhabditis elegans Prion-like-(q/n... 37 0.017
U97407-7|AAB52480.2| 457|Caenorhabditis elegans Prion-like-(q/n... 37 0.017
Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical pr... 36 0.022
U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein. 36 0.022
M77697-4|AAA27900.4| 493|Caenorhabditis elegans Hypothetical pr... 36 0.029
AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical ... 35 0.051
U39651-6|AAL11483.1| 286|Caenorhabditis elegans Temporarily ass... 35 0.068
U39651-5|AAL11482.2| 395|Caenorhabditis elegans Temporarily ass... 35 0.068
AL021492-14|CAA16388.2| 473|Caenorhabditis elegans Hypothetical... 34 0.12
U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protei... 31 0.63
AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk (m... 31 0.63
AF039047-14|AAM15589.1| 978|Caenorhabditis elegans Human mlk (m... 31 0.63
Z81568-1|CAB04594.1| 681|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z70211-4|CAA94159.1| 825|Caenorhabditis elegans Hypothetical pr... 29 3.4
U28732-6|AAB04903.2| 489|Caenorhabditis elegans Hypothetical pr... 29 3.4
U28732-5|AAT92075.1| 495|Caenorhabditis elegans Hypothetical pr... 29 3.4
U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase ... 29 4.4
U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase ... 29 4.4
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 29 4.4
Z81543-5|CAB04427.2| 507|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z71181-7|CAA94900.2| 485|Caenorhabditis elegans Hypothetical pr... 28 5.9
U40800-3|AAA81490.1| 467|Caenorhabditis elegans Squashed vulva ... 28 5.9
U39470-2|AAC71118.1| 862|Caenorhabditis elegans Temporarily ass... 28 5.9
AY147933-1|AAN39843.1| 467|Caenorhabditis elegans UDP-glucuroni... 28 5.9
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 28 5.9
U29082-8|AAA68405.1| 228|Caenorhabditis elegans Sex muscle abno... 28 7.8
S88446-1|AAB21850.1| 228|Caenorhabditis elegans sem-5 protein. 28 7.8
>AF077534-2|AAC26284.1| 648|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform b protein.
Length = 648
Score = 126 bits (303), Expect = 2e-29
Identities = 82/250 (32%), Positives = 124/250 (49%), Gaps = 14/250 (5%)
Frame = +3
Query: 9 LSSEDEEYEACMHALATLNNYVQQCNEGARNTERVEEMYRL-ARVIEFPAGVRHPPDLGX 185
+++ D+ Y+ AL + N V+ CNEGAR ER E++ + R+I A ++ P +
Sbjct: 333 ITTTDDRYKTATDALTSSNRVVRDCNEGARRMERTEQLLDIDRRLIYKDADLKRIPLVSN 392
Query: 186 XXXXXXXXXXXXXXXSGEMTQLVWKNDELKLTFGKKFHKVPLHVFLFNDLLVVTKKKGEE 365
G +TQLV + L +K LHVFLF+D++++TKKK
Sbjct: 393 SRYLVK---------KGVLTQLVERRSSNILQSRQKART--LHVFLFSDMIMITKKKLNG 441
Query: 366 SYVAVDHCPRSLLEVCSAEG------VAATK------HAXXXXXXDNHEGRTVEMLMSCG 509
++V D+ R +++ E + AT H N + E+L+S
Sbjct: 442 TFVCKDYAARRFVDMQPIEPDNPKIPLGATSNLVGRPHLFLCTLMRNARDKQTELLLSAD 501
Query: 510 SETEVSRWREALWLPAAA-PGEAVYAGWDCPQVCALYAYGAAQPDELSLAEGDVVNVTRK 686
SET+ RW A+ P + P E +YA WDCPQ ++AY +Q DEL L GD +N+ RK
Sbjct: 502 SETDRERWLSAVRPPTSTNPEEKIYAEWDCPQALVVHAYQPSQADELQLNIGDSLNILRK 561
Query: 687 TAEGWYYGER 716
+GW YGER
Sbjct: 562 MPDGWLYGER 571
>AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform a protein.
Length = 1136
Score = 126 bits (303), Expect = 2e-29
Identities = 82/250 (32%), Positives = 124/250 (49%), Gaps = 14/250 (5%)
Frame = +3
Query: 9 LSSEDEEYEACMHALATLNNYVQQCNEGARNTERVEEMYRL-ARVIEFPAGVRHPPDLGX 185
+++ D+ Y+ AL + N V+ CNEGAR ER E++ + R+I A ++ P +
Sbjct: 821 ITTTDDRYKTATDALTSSNRVVRDCNEGARRMERTEQLLDIDRRLIYKDADLKRIPLVSN 880
Query: 186 XXXXXXXXXXXXXXXSGEMTQLVWKNDELKLTFGKKFHKVPLHVFLFNDLLVVTKKKGEE 365
G +TQLV + L +K LHVFLF+D++++TKKK
Sbjct: 881 SRYLVK---------KGVLTQLVERRSSNILQSRQKART--LHVFLFSDMIMITKKKLNG 929
Query: 366 SYVAVDHCPRSLLEVCSAEG------VAATK------HAXXXXXXDNHEGRTVEMLMSCG 509
++V D+ R +++ E + AT H N + E+L+S
Sbjct: 930 TFVCKDYAARRFVDMQPIEPDNPKIPLGATSNLVGRPHLFLCTLMRNARDKQTELLLSAD 989
Query: 510 SETEVSRWREALWLPAAA-PGEAVYAGWDCPQVCALYAYGAAQPDELSLAEGDVVNVTRK 686
SET+ RW A+ P + P E +YA WDCPQ ++AY +Q DEL L GD +N+ RK
Sbjct: 990 SETDRERWLSAVRPPTSTNPEEKIYAEWDCPQALVVHAYQPSQADELQLNIGDSLNILRK 1049
Query: 687 TAEGWYYGER 716
+GW YGER
Sbjct: 1050 MPDGWLYGER 1059
>AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical
protein Y116A8C.36 protein.
Length = 1097
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = +3
Query: 546 WLPAAAPGEAVYAGWDCPQVCALYAYGAAQPDELSLAEGDVVNVTRKTAEGWYYGER 716
W P A + A+Y Y A+QPDEL GDV+ VT K+ W+ G R
Sbjct: 1023 WFPGEYVKVLEEAASPATRATAVYDYEASQPDELGFKTGDVIIVTDKSEAEWWSGHR 1079
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 609 ALYAYGAAQPDELSLAEGDVVNVTRKTA--EGWYYGE 713
AL+A+ A DELS GDV+ V + A GW G+
Sbjct: 680 ALFAFEARSEDELSFEPGDVIIVFQSHAAEPGWRAGQ 716
>U32305-1|AAK18854.2| 469|Caenorhabditis elegans Hypothetical
protein B0336.6 protein.
Length = 469
Score = 37.5 bits (83), Expect = 0.010
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +3
Query: 600 QVCALYAYGAAQPDELSLAEGDVVNVTRKTAEGWYYG 710
+V LY Y AA+ DEL+L E +V V +K + WY G
Sbjct: 416 KVRVLYDYDAAKEDELTLRENAIVYVLKKNDDDWYEG 452
>L08403-3|AAT92076.1| 335|Caenorhabditis elegans Hypothetical
protein F42H10.3 protein.
Length = 335
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +3
Query: 603 VCALYAYGAAQPDELSLAEGDVVNVTRKTAEGWYYG 710
V A+Y Y AA DE+S EGD++ K +GW G
Sbjct: 271 VKAIYDYAAADKDEISFLEGDIIVNCEKIDDGWMTG 306
>U97407-8|AAN84851.1| 397|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 19,
isoform b protein.
Length = 397
Score = 36.7 bits (81), Expect = 0.017
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +3
Query: 495 LMSCGSETEVSRWREALWLPAAAPGEAVYAGWDCPQ--VCALYAYGAAQPDELSLAEGDV 668
L + + + ++ A A AV + P+ V ALY + AA+ +ELS GD+
Sbjct: 178 LADAEKQEKAKKSTSTMYPSAKASSPAVQTNSNIPEKNVRALYDFEAAESNELSFVAGDI 237
Query: 669 VNVTRKTAEGWYYG 710
+ +T ++ W+ G
Sbjct: 238 ITITDESNPHWWTG 251
>U97407-7|AAB52480.2| 457|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 19,
isoform a protein.
Length = 457
Score = 36.7 bits (81), Expect = 0.017
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +3
Query: 495 LMSCGSETEVSRWREALWLPAAAPGEAVYAGWDCPQ--VCALYAYGAAQPDELSLAEGDV 668
L + + + ++ A A AV + P+ V ALY + AA+ +ELS GD+
Sbjct: 186 LADAEKQEKAKKSTSTMYPSAKASSPAVQTNSNIPEKNVRALYDFEAAESNELSFVAGDI 245
Query: 669 VNVTRKTAEGWYYG 710
+ +T ++ W+ G
Sbjct: 246 ITITDESNPHWWTG 259
>Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical protein
F29D10.4 protein.
Length = 1100
Score = 36.3 bits (80), Expect = 0.022
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 597 PQVCALYAYGAAQPDELSLAEGDVVNVTRKTAEGWYYGE 713
P V A+Y Y A DELS G + + K A GW+ G+
Sbjct: 1047 PVVIAVYPYEAQDVDELSFEAGAEIELMNKDASGWWQGK 1085
>U52515-1|AAA97925.1| 1036|Caenorhabditis elegans hum-1 protein.
Length = 1036
Score = 36.3 bits (80), Expect = 0.022
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 597 PQVCALYAYGAAQPDELSLAEGDVVNVTRKTAEGWYYGE 713
P V A+Y Y A DELS G + + K A GW+ G+
Sbjct: 983 PVVIAVYPYEAQDVDELSFEAGAEIELMNKDASGWWQGK 1021
>M77697-4|AAA27900.4| 493|Caenorhabditis elegans Hypothetical
protein B0303.7 protein.
Length = 493
Score = 35.9 bits (79), Expect = 0.029
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 597 PQVCALYAYGAAQPDELSLAEGDVVNVTRKTAEGWYYGE 713
P A + Y Q DE+ L GD V +++K W+YGE
Sbjct: 194 PYGIAKFDYAPTQSDEMGLRIGDTVLISKKVDAEWFYGE 232
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 609 ALYAYGAAQPDELSLAEGDVVNVTRKTAEGWYYGE 713
A+Y Y + + +L+ A G + VT + E W GE
Sbjct: 278 AIYDYNSNEAGDLNFAVGSQIMVTARVNEEWLEGE 312
>AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical
protein Y44E3A.4 protein.
Length = 511
Score = 35.1 bits (77), Expect = 0.051
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 609 ALYAYGAAQPDELSLAEGDVVNVTRKTAEGWYYGE 713
A YAY + Q DELS GD++ + +GW G+
Sbjct: 53 ATYAYSSKQDDELSFVVGDLIELISDVEDGWSKGK 87
>U39651-6|AAL11483.1| 286|Caenorhabditis elegans Temporarily
assigned gene nameprotein 22, isoform b protein.
Length = 286
Score = 34.7 bits (76), Expect = 0.068
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 615 YAYGAAQPDELSLAEGDVVNVTRKTAEGWYYGE 713
+ Y DEL L +GD V V K+ +GW+ GE
Sbjct: 11 FTYEPRLEDELGLTKGDFVYVVEKSTDGWWKGE 43
>U39651-5|AAL11482.2| 395|Caenorhabditis elegans Temporarily
assigned gene nameprotein 22, isoform a protein.
Length = 395
Score = 34.7 bits (76), Expect = 0.068
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 615 YAYGAAQPDELSLAEGDVVNVTRKTAEGWYYGE 713
+ Y DEL L +GD V V K+ +GW+ GE
Sbjct: 123 FTYEPRLEDELGLTKGDFVYVVEKSTDGWWKGE 155
>AL021492-14|CAA16388.2| 473|Caenorhabditis elegans Hypothetical
protein Y45F10D.13a protein.
Length = 473
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +3
Query: 609 ALYAYGAAQPDELSLAEGDVVNVTRKTAEGWYYGERTR 722
A+Y Y + DEL L D++ V K +GW+ G R
Sbjct: 421 AVYPYQPQKEDELQLYTNDIIFVVEKCDDGWFIGTSLR 458
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 609 ALYAYGAAQPDELSLAEGDVVNVTRKTAEGWYYGER 716
A+Y + EL L GD++ + R+ W GER
Sbjct: 158 AVYKFEPRSARELPLNRGDIIRIIREVDGYWMEGER 193
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +3
Query: 591 DCPQVCALYAYGAAQPDELSLAEGDVVNVTRKTAEGWYYG 710
D ++ A+Y + A ELSL G+++ R+ W G
Sbjct: 214 DSQKMRAIYPFTARSDTELSLKRGEIITRRRQIDSNWLEG 253
>U49941-8|AAB53876.1| 2427|Caenorhabditis elegans Spectrin protein 1
protein.
Length = 2427
Score = 31.5 bits (68), Expect = 0.63
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 585 GWDCPQVCALYAYGAAQPDELSLAEGDVVNVTRKTAEGWY 704
G DC V ALY Y P E+S+ +GDV+ + + W+
Sbjct: 984 GRDC--VLALYDYQEKSPREVSMKKGDVLTLLNASNRDWW 1021
>AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform a
protein.
Length = 1040
Score = 31.5 bits (68), Expect = 0.63
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +3
Query: 609 ALYAYGAAQPDELSLAEGDVVN-VTRKTAE-GWYYGE 713
A Y Y A + DEL+L G ++ VT +T E GWY GE
Sbjct: 76 ASYEYEAQKDDELNLPLGAIITLVTVETNEDGWYRGE 112
>AF039047-14|AAM15589.1| 978|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform b
protein.
Length = 978
Score = 31.5 bits (68), Expect = 0.63
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +3
Query: 609 ALYAYGAAQPDELSLAEGDVVN-VTRKTAE-GWYYGE 713
A Y Y A + DEL+L G ++ VT +T E GWY GE
Sbjct: 76 ASYEYEAQKDDELNLPLGAIITLVTVETNEDGWYRGE 112
>Z81568-1|CAB04594.1| 681|Caenorhabditis elegans Hypothetical
protein K08E3.1 protein.
Length = 681
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +3
Query: 519 EVSRWREALWLPAAAPGEAVYAGWDCPQVCALYAY--GAAQPDELSLAEGDVVNVT-RKT 689
+V W + + +PA A G+A Y +DC + L + G + L+ G V+N++ RK
Sbjct: 104 QVPNWLQPIPVPANARGQAAYHPYDCMTLLCLCPFFNGRNVNGQCVLSNGVVLNMSWRKE 163
Query: 690 AEGWYYGERTR 722
ER R
Sbjct: 164 YRMMTEDERRR 174
>Z70211-4|CAA94159.1| 825|Caenorhabditis elegans Hypothetical
protein K11E4.4 protein.
Length = 825
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +3
Query: 609 ALYAYGAAQPDELSLAEGDVVNVTRKTAEGWYYG 710
A + + + DELS + D++ +T++ GW+ G
Sbjct: 192 AKFQFEGSNNDELSFDKDDIITITQQQEGGWWEG 225
>U28732-6|AAB04903.2| 489|Caenorhabditis elegans Hypothetical
protein F45E1.7a protein.
Length = 489
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 612 LYAYGAAQPDELSLAEGDVVNV-TRKTAEGWYYG 710
LY Y A+ DE++L +G+++ V T + GW G
Sbjct: 435 LYDYAPAEGDEIALRKGEMIEVLTEPDSLGWCTG 468
>U28732-5|AAT92075.1| 495|Caenorhabditis elegans Hypothetical
protein F45E1.7b protein.
Length = 495
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 612 LYAYGAAQPDELSLAEGDVVNV-TRKTAEGWYYG 710
LY Y A+ DE++L +G+++ V T + GW G
Sbjct: 441 LYDYAPAEGDEIALRKGEMIEVLTEPDSLGWCTG 474
>U41032-4|AAO44918.2| 1130|Caenorhabditis elegans Protein kinase
protein 25, isoformb protein.
Length = 1130
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 621 YGAAQPDELSLAEGDVVNVTRKTAEGWY 704
Y + QP L L +GD V V T + W+
Sbjct: 377 YNSIQPGALQLTKGDEVVVVENTGQDWF 404
>U41032-3|AAO44917.1| 1237|Caenorhabditis elegans Protein kinase
protein 25, isoforma protein.
Length = 1237
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 621 YGAAQPDELSLAEGDVVNVTRKTAEGWY 704
Y + QP L L +GD V V T + W+
Sbjct: 377 YNSIQPGALQLTKGDEVVVVENTGQDWF 404
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 236 AGPDQPPHRPSVPARQGGPQVGRVAHAGRELDDA 135
AGP PP +P P QG P + +G ++ A
Sbjct: 91 AGPPGPPGQPGAPGEQGHPGLAGQPGSGARINPA 124
>Z81543-5|CAB04427.2| 507|Caenorhabditis elegans Hypothetical
protein F49B2.5 protein.
Length = 507
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +3
Query: 609 ALYAYGAAQPDELSLAEGDVVNVTRKTAEGWYY 707
AL+ Y A D+LS + D++ + T W++
Sbjct: 64 ALFQYDARTDDDLSFKKDDILEILNDTQGDWWF 96
>Z71181-7|CAA94900.2| 485|Caenorhabditis elegans Hypothetical
protein K07C5.7 protein.
Length = 485
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = -2
Query: 502 DINISTVLPSWLSRRVRSSACLVAATPSALHTSSSERGQWSTATYDSSPFFLVTTS 335
DIN + ++ R+R+S +++P HT S E + + D P +VT S
Sbjct: 21 DINFEARIGTFFDLRLRTSYFKKSSSPLLSHTDSEEDLNYLSKHEDKRPVAIVTGS 76
>U40800-3|AAA81490.1| 467|Caenorhabditis elegans Squashed vulva
protein 1 protein.
Length = 467
Score = 28.3 bits (60), Expect = 5.9
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = -1
Query: 464 EEGEEQRVLGGGHSLRAAHLQQRARTVVHRHVRLLAFLLGDDEQVVEQEHVQGNL-VELL 288
EE ++ ++ GG +HL + H + L + G + V EH G+ E++
Sbjct: 133 EETRKRILITGGAGFVGSHLVDKLMLDGHEVIALDNYFTGRKKNV---EHWIGHPNFEMV 189
Query: 287 AEGQLQ-FVILPNQLRHLAGPDQPPH 213
+ + + +Q+ HLA P PPH
Sbjct: 190 HHDVVNPYFVEVDQIYHLASPASPPH 215
>U39470-2|AAC71118.1| 862|Caenorhabditis elegans Temporarily
assigned gene nameprotein 127 protein.
Length = 862
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +3
Query: 249 LVWKNDELKLTFGKKFHKVPLHVFLFNDLLVVTKK 353
L+++ D L++ GKK K +H +F D+ ++ +K
Sbjct: 380 LIYRGD-LRMQEGKKGSKADVHCIIFTDMFLICRK 413
>AY147933-1|AAN39843.1| 467|Caenorhabditis elegans UDP-glucuronic
acid decarboxylase protein.
Length = 467
Score = 28.3 bits (60), Expect = 5.9
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = -1
Query: 464 EEGEEQRVLGGGHSLRAAHLQQRARTVVHRHVRLLAFLLGDDEQVVEQEHVQGNL-VELL 288
EE ++ ++ GG +HL + H + L + G + V EH G+ E++
Sbjct: 133 EETRKRILITGGAGFVGSHLVDKLMLDGHEVIALDNYFTGRKKNV---EHWIGHPNFEMV 189
Query: 287 AEGQLQ-FVILPNQLRHLAGPDQPPH 213
+ + + +Q+ HLA P PPH
Sbjct: 190 HHDVVNPYFVEVDQIYHLASPASPPH 215
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/37 (32%), Positives = 14/37 (37%)
Frame = -1
Query: 248 LRHLAGPDQPPHRPSVPARQGGPQVGRVAHAGRELDD 138
L P PP P PA +G P + E DD
Sbjct: 71 LNEFGRPRNPPRTPPEPAPEGQPTCESIGFVNEEFDD 107
>U29082-8|AAA68405.1| 228|Caenorhabditis elegans Sex muscle
abnormal protein 5 protein.
Length = 228
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 603 VCALYAYGAAQPDELSLAEGDVVNVTRKTAEGWYYGE 713
V AL+ + + EL+ GDV+ + K W+ G+
Sbjct: 159 VQALFDFNPQESGELAFKRGDVITLINKDDPNWWEGQ 195
>S88446-1|AAB21850.1| 228|Caenorhabditis elegans sem-5 protein.
Length = 228
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = +3
Query: 603 VCALYAYGAAQPDELSLAEGDVVNVTRKTAEGWYYGE 713
V AL+ + + EL+ GDV+ + K W+ G+
Sbjct: 159 VQALFDFNPQESGELAFKRGDVITLINKDDPNWWEGQ 195
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,717,083
Number of Sequences: 27780
Number of extensions: 212205
Number of successful extensions: 1162
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1154
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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