Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0185
(748 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1254 + 35761046-35761162,35761332-35761416,35761877-357620... 73 2e-13
01_05_0420 + 21969797-21970939,21971307-21971369,21971488-219716... 40 0.002
02_05_1332 + 35758657-35758728,35758959-35760689 39 0.005
04_04_1547 - 34306836-34308713,34308938-34309048,34310056-34310202 36 0.026
08_02_1097 + 24284494-24284496,24284946-24285407,24285476-242864... 35 0.079
06_03_0766 - 24425486-24426245,24430766-24430855,24430951-244310... 34 0.14
02_01_0703 + 5251901-5251950,5252783-5253554 33 0.18
01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283,856... 33 0.24
06_02_0136 + 12195422-12195435,12196047-12196122,12196896-121977... 33 0.32
04_04_1500 + 34010819-34011016,34013267-34013308,34014195-340142... 33 0.32
03_06_0523 + 34499533-34499705,34499808-34499917,34500037-345002... 32 0.56
01_05_0707 - 24468329-24468448,24468794-24468940,24469050-244691... 31 0.74
09_03_0048 + 11880848-11880952,11881030-11881312,11882667-118827... 31 0.97
07_01_1143 - 10711023-10711884,10713603-10713826,10714253-107145... 31 0.97
06_01_0493 - 3536207-3537056,3537603-3537826,3538234-3538503,353... 31 0.97
01_06_1805 - 39999987-40000169,40000648-40000974,40001724-400020... 31 0.97
05_07_0125 + 27861368-27862282 30 2.2
05_02_0028 - 5764980-5766374 30 2.2
09_02_0357 + 7788946-7789326,7789620-7789997 29 3.0
05_05_0351 - 24319356-24319385,24319470-24320902,24321011-243211... 29 3.0
03_05_0799 + 27809301-27811550 29 3.0
02_05_1041 - 33713561-33714564,33714844-33714904,33715640-337159... 29 3.0
02_02_0568 + 11577804-11578676,11578956-11579042,11579043-11579141 29 3.0
03_02_0709 + 10583621-10583626,10583711-10584712,10585304-10585669 29 3.9
10_07_0063 - 12502305-12503361,12503567-12503668,12504251-125043... 29 5.2
09_06_0048 + 20477076-20478547,20478643-20478722,20478880-204788... 29 5.2
08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817 29 5.2
01_01_0650 - 4948852-4950012 29 5.2
12_02_0188 - 15158824-15159215,15159299-15159809,15159885-151600... 28 6.9
12_02_0008 + 12239759-12239923,12240404-12240443,12241278-122414... 28 6.9
05_01_0524 - 4522488-4523762,4524534-4524644,4524794-4524889 28 6.9
02_05_0300 + 27681204-27681656,27681745-27681840,27681933-276820... 28 6.9
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411... 28 9.1
05_01_0184 - 1298640-1298751,1298936-1299027,1299695-1299910,130... 28 9.1
05_01_0182 + 1284900-1285469,1285604-1286612,1286698-1287107 28 9.1
>01_06_1254 +
35761046-35761162,35761332-35761416,35761877-35762017,
35762118-35762206,35762519-35762701,35763509-35763697,
35763808-35763938,35764023-35764125,35765123-35765308
Length = 407
Score = 73.3 bits (172), Expect = 2e-13
Identities = 33/54 (61%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = +2
Query: 533 LFKPVQTQ-KVEKGTDPKSVVCAFFKQGQCAKGDRCKFSHDLTIERKAEKRSLY 691
LFK +Q KV G DPKS+VC FFK GQC KG +CKFSHDL ++RK EK +Y
Sbjct: 55 LFKVAVSQPKVPVGVDPKSIVCEFFKVGQCQKGFKCKFSHDLNVQRKGEKIDIY 108
Score = 36.7 bits (81), Expect = 0.020
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 298 MPPKKPSGASXXXXXXXXXXVIEDKTFGLKNKKGAKQ-QKFIQQVEKQVK 444
MPPKK A V+EDKTFGLKNK +K QK+ ++ E++ +
Sbjct: 1 MPPKK--AAPSKADLAKKQKVVEDKTFGLKNKNKSKNVQKYKKKEEEKAR 48
>01_05_0420 +
21969797-21970939,21971307-21971369,21971488-21971616,
21972241-21972291,21972669-21972809,21972922-21973122,
21973201-21973419,21973582-21973700,21973772-21973862,
21975864-21975965,21976291-21976315,21976522-21976592
Length = 784
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 545 VQTQKVEKGTDPKSV-VCAFFKQGQCAKGDRCKFSHDLTIERKAEKRSLY 691
V+ K++ PK V VC F+ G+C +G+ CKFSHD T K++ + Y
Sbjct: 418 VKRLKLQPVIKPKVVKVCHFYLHGKCQQGNLCKFSHDTTPLTKSKPCTHY 467
Score = 32.7 bits (71), Expect = 0.32
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 581 KSVVCAFFKQGQCAKGDRCKFSHDLT 658
KS C + +G C KGD C + H+L+
Sbjct: 460 KSKPCTHYARGSCLKGDDCPYDHELS 485
Score = 31.9 bits (69), Expect = 0.56
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 599 FFKQGQCAKGDRCKFSH 649
F + G C +GD+CKFSH
Sbjct: 492 FMENGMCIRGDKCKFSH 508
>02_05_1332 + 35758657-35758728,35758959-35760689
Length = 600
Score = 38.7 bits (86), Expect = 0.005
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +2
Query: 569 GTDPKSVVCAFFKQGQCAKGDRCKFSH 649
GT + V C +F++G C KGDRC F H
Sbjct: 60 GTAKQGVPCYYFQKGMCVKGDRCAFLH 86
>04_04_1547 - 34306836-34308713,34308938-34309048,34310056-34310202
Length = 711
Score = 36.3 bits (80), Expect = 0.026
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 587 VVCAFFKQGQCAKGDRCKFSH 649
V C +FK+G C KGDRC F H
Sbjct: 116 VPCYYFKKGNCLKGDRCAFYH 136
>08_02_1097 +
24284494-24284496,24284946-24285407,24285476-24286450,
24286566-24286655,24286760-24287021,24287447-24287472
Length = 605
Score = 34.7 bits (76), Expect = 0.079
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 545 VQTQKVEKGTDPKSVVCA-FFKQGQCAKGDRCKFSHDLTIERKAEKRSLY 691
+Q + +K +PK+V+C + + G C+ GD C+++H R + R Y
Sbjct: 509 IQAKGKQKMREPKTVMCPDWCRTGHCSSGDGCEYAHSQDELRVIDARPKY 558
>06_03_0766 -
24425486-24426245,24430766-24430855,24430951-24431070,
24431568-24431746,24432046-24432231,24432454-24432547,
24432679-24432743,24433652-24433987
Length = 609
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 569 GTDPKSVVCAFFKQGQCAKGDRCKFSHDLTIERK 670
G++ K+ +C F +G C GDRC F+H + RK
Sbjct: 571 GSNFKTKLCENFNKGSCTFGDRCHFAHGESELRK 604
>02_01_0703 + 5251901-5251950,5252783-5253554
Length = 273
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 569 GTDPKSVVCAFFKQGQCAKGDRCKFSHDLTIERKA 673
G++ K+ +C F +G C GDRC F+H RK+
Sbjct: 236 GSNFKTKLCENFTKGSCTFGDRCHFAHGENELRKS 270
>01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283,
8561377-8561642,8561967-8562111,8562411-8562530,
8562611-8562930,8564161-8564341,8564434-8564580,
8565186-8565497,8566303-8566450,8566592-8566765,
8567385-8567446,8567499-8567571,8567628-8567683,
8568370-8568645,8569541-8569588,8569870-8569991,
8570258-8570413,8571037-8571079,8572624-8572701,
8572972-8573070,8573168-8573209,8573302-8573304
Length = 1264
Score = 33.1 bits (72), Expect = 0.24
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 590 VCAFFKQGQCAKGDRCKFSH 649
+C FF G C +GD C FSH
Sbjct: 985 MCVFFLNGSCNRGDTCHFSH 1004
>06_02_0136 +
12195422-12195435,12196047-12196122,12196896-12197707,
12197941-12198010,12199469-12199557,12199633-12199666
Length = 364
Score = 32.7 bits (71), Expect = 0.32
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2
Query: 590 VCAFFKQGQCAKGDRCKFSH 649
VC F+++G C+ G RC++ H
Sbjct: 31 VCTFYQKGSCSYGSRCRYDH 50
>04_04_1500 +
34010819-34011016,34013267-34013308,34014195-34014204,
34014526-34014586,34014621-34014678,34015266-34015412,
34015643-34016205,34018942-34019728
Length = 621
Score = 32.7 bits (71), Expect = 0.32
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 581 KSVVCAFFKQGQCAKGDRCKFSHDLTIERK 670
K+ +C F +G C GDRC F+H +RK
Sbjct: 589 KTKLCENFVKGTCTFGDRCHFAHGENEQRK 618
>03_06_0523 +
34499533-34499705,34499808-34499917,34500037-34500224,
34500984-34501451
Length = 312
Score = 31.9 bits (69), Expect = 0.56
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 590 VCAFFKQGQCAKGDRCKFSHD 652
VC F++G+C +G C++SHD
Sbjct: 135 VCYAFQKGECNRGASCRYSHD 155
>01_05_0707 -
24468329-24468448,24468794-24468940,24469050-24469103,
24469185-24469300,24470537-24470583,24470686-24470723,
24471050-24471268,24471504-24471602,24471675-24471728,
24472907-24473148,24474258-24474447
Length = 441
Score = 31.5 bits (68), Expect = 0.74
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +2
Query: 530 ALFKPVQTQKVEKGTDPKSVVCAFF-KQGQCAKGDRCKFSHDL 655
A PV V P + VC F+ K G C DRCKF H +
Sbjct: 331 AAHMPVGPGPVTYPQRPGATVCDFYMKTGFCKFADRCKFHHPI 373
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +2
Query: 584 SVVCAFF-KQGQCAKGDRCKFSH 649
+VVCAF+ K G C G +CKF H
Sbjct: 404 AVVCAFYMKTGVCKFGMQCKFDH 426
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +2
Query: 593 CAFF-KQGQCAKGDRCKFSH 649
C FF K G+C G +CKF+H
Sbjct: 161 CPFFMKTGKCKFGSKCKFNH 180
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = +2
Query: 578 PKSVVCAFF-KQGQCAKGDRCKFSH 649
P V C F+ K G C G C+F+H
Sbjct: 268 PGEVDCPFYMKMGSCKFGSTCRFNH 292
>09_03_0048 +
11880848-11880952,11881030-11881312,11882667-11882770,
11883998-11884416,11884698-11884998,11885136-11885232,
11885719-11885864,11885975-11886103
Length = 527
Score = 31.1 bits (67), Expect = 0.97
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 581 KSVVCAFFKQGQCAKGDRCKFSHDLTIE 664
++V F +G+C KG C+F+H L+ E
Sbjct: 267 RNVCFDFLNKGKCEKGPECRFAHSLSDE 294
>07_01_1143 -
10711023-10711884,10713603-10713826,10714253-10714522,
10715071-10715175
Length = 486
Score = 31.1 bits (67), Expect = 0.97
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +2
Query: 590 VCAFFKQGQCAKGDRCKFSHDL 655
VC+F+ +G+C +G C + H++
Sbjct: 162 VCSFYVRGECTRGAECPYRHEM 183
>06_01_0493 -
3536207-3537056,3537603-3537826,3538234-3538503,
3539042-3539146
Length = 482
Score = 31.1 bits (67), Expect = 0.97
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +2
Query: 590 VCAFFKQGQCAKGDRCKFSHDL 655
VC+F+ +G+C +G C + H++
Sbjct: 162 VCSFYVRGECTRGAECPYRHEM 183
>01_06_1805 -
39999987-40000169,40000648-40000974,40001724-40002017,
40002112-40002231,40002714-40002776,40003150-40003310,
40003864-40004035
Length = 439
Score = 31.1 bits (67), Expect = 0.97
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +2
Query: 578 PKSVVCAFF-KQGQCAKGDRCKFSHDLTIERKAEKR 682
P CA++ K GQC G+ CKF H A R
Sbjct: 172 PSEKECAYYLKTGQCKYGNTCKFHHPELFNAMASSR 207
>05_07_0125 + 27861368-27862282
Length = 304
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +2
Query: 569 GTDPKSVVCAF-FKQGQCAKGDRCKFSHD 652
GT+ V C F FK G C GDRC H+
Sbjct: 10 GTEKDRVNCPFYFKIGACRHGDRCSRLHN 38
>05_02_0028 - 5764980-5766374
Length = 464
Score = 29.9 bits (64), Expect = 2.2
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 593 CAFFKQGQCAKGDRCKFSH 649
C F++G C +GD C+F+H
Sbjct: 185 CPDFRKGGCKRGDACEFAH 203
>09_02_0357 + 7788946-7789326,7789620-7789997
Length = 252
Score = 29.5 bits (63), Expect = 3.0
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +2
Query: 581 KSVVCAFFKQGQCAKGDRCKFSH 649
KSV+C +++G+C G C+++H
Sbjct: 37 KSVLCMKWREGRCHNGVACRYAH 59
>05_05_0351 -
24319356-24319385,24319470-24320902,24321011-24321180,
24321302-24321485,24323094-24323264,24324002-24324125
Length = 703
Score = 29.5 bits (63), Expect = 3.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 593 CAFFKQGQCAKGDRCKFSHD 652
C F+ QG+C G C F H+
Sbjct: 182 CTFYAQGRCKNGKSCTFLHE 201
>03_05_0799 + 27809301-27811550
Length = 749
Score = 29.5 bits (63), Expect = 3.0
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +2
Query: 587 VVCAFFKQGQCAKGDRCKFSH 649
V C F++G C +GD C+++H
Sbjct: 310 VPCPDFRKGVCRRGDMCEYAH 330
>02_05_1041 -
33713561-33714564,33714844-33714904,33715640-33715951,
33716780-33716917
Length = 504
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 572 TDPKSVVCAFFKQGQCAKGDRCKFSHDLTI 661
T +C FF Q +C G C+ SH + I
Sbjct: 145 TSENMSMCKFFLQQRCRFGSNCRLSHGIVI 174
>02_02_0568 + 11577804-11578676,11578956-11579042,11579043-11579141
Length = 352
Score = 29.5 bits (63), Expect = 3.0
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +2
Query: 590 VCAFFKQ-GQCAKGDRCKFSHD 652
+C +K+ G C GD CKF HD
Sbjct: 192 ICKDYKETGYCGYGDSCKFMHD 213
>03_02_0709 + 10583621-10583626,10583711-10584712,10585304-10585669
Length = 457
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 545 VQTQKVEKGTDPKSVVCAFFKQGQCAKGDRCKFSHDL 655
V+ + +G K+ +C +++G C G RC+F+H L
Sbjct: 373 VEVEAYRQGA-AKTELCNKWERGACPYGARCRFAHGL 408
>10_07_0063 -
12502305-12503361,12503567-12503668,12504251-12504378,
12504653-12504764,12504876-12504927,12505260-12505517,
12505943-12506079,12506296-12506606
Length = 718
Score = 28.7 bits (61), Expect = 5.2
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 605 KQGQCAKGDRCKFSHDL 655
+QG C G+ CKF HDL
Sbjct: 701 QQGWCPYGENCKFMHDL 717
>09_06_0048 + 20477076-20478547,20478643-20478722,20478880-20478893,
20480164-20481199,20481275-20481402,20481673-20481732,
20481774-20481878,20481971-20482055,20482315-20482470,
20482562-20482831,20482877-20483671,20483844-20483903,
20484062-20485134
Length = 1777
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +2
Query: 578 PKSVVC-AFFKQGQCAKGDRCKFSHDL 655
PK VC + +G C G+ C FSH +
Sbjct: 1679 PKRGVCYSILDKGYCKNGEHCNFSHSI 1705
>08_01_0244 + 2016548-2017101,2017392-2019681,2019785-2019817
Length = 958
Score = 28.7 bits (61), Expect = 5.2
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +2
Query: 593 CAFFKQGQCAKGDRCKFSHDLTIERKAEK 679
C F G+C +G C+F H+ + R+ ++
Sbjct: 235 CRDFVAGRCRRGSNCRFPHEDGVRRQFDE 263
>01_01_0650 - 4948852-4950012
Length = 386
Score = 28.7 bits (61), Expect = 5.2
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +2
Query: 593 CAFFKQGQCAKGDRCKFSH 649
C F++G C +GD C+++H
Sbjct: 122 CPDFRKGGCKRGDACEYAH 140
>12_02_0188 -
15158824-15159215,15159299-15159809,15159885-15160015,
15160107-15160310,15160385-15161066,15161158-15161414,
15161491-15161631,15161731-15162136
Length = 907
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/47 (23%), Positives = 25/47 (53%)
Frame = +1
Query: 178 PILIRPLDQTEIDRISQSVSVVRFAT*KVRQLCVTRRNLTMPPKKPS 318
P++ +D T++ R + + ++ +A + + +R PPKKP+
Sbjct: 665 PLVANLVDLTDLRRTTGASTIAEWADVNIADTHIGKRKTRQPPKKPT 711
>12_02_0008 +
12239759-12239923,12240404-12240443,12241278-12241435,
12242400-12242462,12243149-12243268,12243388-12243684,
12245012-12245335,12246411-12246680
Length = 478
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +2
Query: 527 AALFKPVQTQKVEKGTDPKSVVCAFF-KQGQCAKGDRCKFSH 649
AAL VQ + P CA++ + GQC CKF H
Sbjct: 165 AALANRVQLNVLGYPMRPNEKECAYYLRTGQCKFASTCKFHH 206
>05_01_0524 - 4522488-4523762,4524534-4524644,4524794-4524889
Length = 493
Score = 28.3 bits (60), Expect = 6.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 593 CAFFKQGQCAKGDRCKFSHD 652
C F+ C+KGD C + H+
Sbjct: 97 CYFYYNSHCSKGDNCPYLHE 116
>02_05_0300 +
27681204-27681656,27681745-27681840,27681933-27682022,
27682126-27682227,27682310-27682456,27683608-27683748,
27683749-27683808,27685133-27685230,27685308-27685410,
27685954-27686037
Length = 457
Score = 28.3 bits (60), Expect = 6.9
Identities = 7/23 (30%), Positives = 15/23 (65%)
Frame = +2
Query: 593 CAFFKQGQCAKGDRCKFSHDLTI 661
C +F G C+ G++C++ H ++
Sbjct: 114 CRYFLAGDCSYGEKCRYPHSYSM 136
>06_03_0867 + 25534760-25539620,25540662-25540857,25540957-25541104,
25541673-25541751,25542151-25542238,25542330-25542600,
25542676-25542718,25542801-25542904,25543374-25543790
Length = 2068
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +2
Query: 584 SVVCAFFKQ-GQCAKGDRCKFSHDLTIERKAEKR 682
S VC F+ G+C +G RCK H + + +R
Sbjct: 1936 SYVCPVFEATGECPQGSRCKLHHPKSKVKSKSRR 1969
>05_01_0184 -
1298640-1298751,1298936-1299027,1299695-1299910,
1300045-1300614
Length = 329
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 645 ENLHLSPFAHCPCLKNAQTTDLGSVP 568
E HL P A C CL+ +T L +P
Sbjct: 176 ERNHLPPLASCFCLRRLMSTGLPQIP 201
>05_01_0182 + 1284900-1285469,1285604-1286612,1286698-1287107
Length = 662
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2
Query: 645 ENLHLSPFAHCPCLKNAQTTDLGSVP 568
E HL P A C CL+ +T L +P
Sbjct: 176 ERNHLPPLASCFCLRRLMSTGLPQIP 201
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,524,547
Number of Sequences: 37544
Number of extensions: 227068
Number of successful extensions: 499
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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