Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0179
         (890 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   7.1  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   9.4  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    23   9.4  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +3

Query: 231 CRLLHTNGSTSSIRWSVLPCSSLAVPLLLTDSNIMVRAR 347
           C L   N    +  +SV+P    A   +L +  IM R++
Sbjct: 69  CNLRTVNSEFDNTNFSVIPAEHTAALSILCNEAIMARSK 107


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = +2

Query: 224 YIMQTPSHKRIDIFYSLVGVALFVASGAIIIDRFQHYGKSEIKDKN 361
           +I ++P H+  D F++ +G   F    + ++    H   S IK  N
Sbjct: 724 FIKESPMHEITDFFHAYLG---FCVDPSSLLSPLNHKRSSGIKSFN 766


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 194 LIIFAGAAAGYIMQTPSHKRIDIFYSLV 277
           +IIF GAA G ++  P   R +  Y+LV
Sbjct: 12  VIIFIGAAHGLLVVGPKFIRANQEYTLV 39


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 723,451
Number of Sequences: 2352
Number of extensions: 13983
Number of successful extensions: 66
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)