Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0177
(354 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 52 2e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 48 3e-08
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 48 3e-08
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 44 4e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 44 4e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 44 5e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 44 5e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 44 5e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 44 5e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 44 5e-07
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 44 5e-07
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 44 5e-07
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 44 5e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 44 5e-07
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 44 7e-07
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 43 1e-06
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 41 4e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 40 7e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 40 9e-06
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 37 6e-05
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 35 3e-04
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 34 4e-04
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 32 0.002
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 32 0.002
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 31 0.005
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 23 1.4
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 1.4
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 21 3.3
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 21 4.3
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 4.3
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 4.3
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 4.3
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 4.3
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 4.3
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 4.3
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 4.3
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 4.3
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 4.3
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 20 7.5
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 20 9.9
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 52.4 bits (120), Expect = 2e-09
Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 8/116 (6%)
Frame = +1
Query: 19 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 177
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 178 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTDGDYAL 342
+ L+ W D + W+ E+G T L V SE +W PD+VL N A DG+Y +
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNA---DGEYGV 119
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 48.0 bits (109), Expect = 3e-08
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +1
Query: 37 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 201
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 202 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 303
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 48.0 bits (109), Expect = 3e-08
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Frame = +1
Query: 7 LTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRE 165
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 166 SESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTDGDY 336
T + ++ W D +L WN ++G T V SE +W PD+VL N A DG+Y
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNY 117
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 44.4 bits (100), Expect = 4e-07
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +1
Query: 43 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 210
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 211 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 309
+D+RL++ G+ + + R+W+PD N
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 44.4 bits (100), Expect = 4e-07
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Frame = +1
Query: 64 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 222
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 223 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTDGDY 336
L WN E+G L V SE +W PD+VL N A DG+Y
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNY 130
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 44.0 bits (99), Expect = 5e-07
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 154 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTD 327
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A D
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 328 GDY 336
G Y
Sbjct: 85 GTY 87
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 44.0 bits (99), Expect = 5e-07
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 154 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTD 327
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A D
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 328 GDY 336
G Y
Sbjct: 85 GTY 87
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 44.0 bits (99), Expect = 5e-07
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 154 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTD 327
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A D
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 328 GDY 336
G Y
Sbjct: 85 GTY 87
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 44.0 bits (99), Expect = 5e-07
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 154 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTD 327
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A D
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 328 GDY 336
G Y
Sbjct: 85 GTY 87
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 44.0 bits (99), Expect = 5e-07
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 154 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTD 327
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A D
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 328 GDY 336
G Y
Sbjct: 85 GTY 87
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 44.0 bits (99), Expect = 5e-07
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 154 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTD 327
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A D
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 328 GDY 336
G Y
Sbjct: 85 GTY 87
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 44.0 bits (99), Expect = 5e-07
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 154 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTD 327
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A D
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 328 GDY 336
G Y
Sbjct: 153 GTY 155
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 44.0 bits (99), Expect = 5e-07
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Frame = +1
Query: 154 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTD 327
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A D
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 328 GDY 336
G Y
Sbjct: 153 GTY 155
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 44.0 bits (99), Expect = 5e-07
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Frame = +1
Query: 37 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 195
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 196 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTDGDY 336
++ +W D +L W+ E+G L V S+ +WRPD+VL N A DG++
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNA---DGNF 121
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 43.6 bits (98), Expect = 7e-07
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +1
Query: 115 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 288
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 289 PDVVLLNAAATTDGDYALR 345
PD+VL N A DG+Y +R
Sbjct: 111 PDIVLFNNA---DGNYEVR 126
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 42.7 bits (96), Expect = 1e-06
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Frame = +1
Query: 64 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 228
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 229 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTDGDY 336
W E+G L V S+ +WRPD+VL N A DG+Y
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNY 125
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 41.1 bits (92), Expect = 4e-06
Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Frame = +1
Query: 64 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 228
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 229 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTDGDY 336
W E+G L V S+ +WRPD+VL N A DG++
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNF 125
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 40.3 bits (90), Expect = 7e-06
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 118 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 294
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 295 VVLLNAA 315
+L N A
Sbjct: 92 TILYNNA 98
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 39.9 bits (89), Expect = 9e-06
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 7/114 (6%)
Frame = +1
Query: 16 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 180
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 181 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTDGDY 336
L++ W D + WN ++G L + RLW+PDV++ N+A DG Y
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTY 124
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 37.1 bits (82), Expect = 6e-05
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Frame = +1
Query: 40 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 207
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 208 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT 324
W D LSW ++ G + V S+ +W PD+ + N+ T
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMT 138
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 34.7 bits (76), Expect = 3e-04
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Frame = +1
Query: 64 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 222
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 223 LSWN--AGEWGCSTWLVSSERLWRPDVVLLN 309
L +N G T L + R+W PD+ N
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSN 124
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 34.3 bits (75), Expect = 4e-04
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = +1
Query: 52 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 216
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 217 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 309
RLS+ S + ER+WRPD N
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYN 126
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 31.9 bits (69), Expect = 0.002
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 9/91 (9%)
Frame = +1
Query: 64 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 222
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 223 LSWN--AGEWGCSTWLVSSERLWRPDVVLLN 309
L +N G T L + R+W PD+ N
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSN 124
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 31.9 bits (69), Expect = 0.002
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Frame = +1
Query: 43 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 210
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 211 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLN 309
D RL++ G T V SE +W PD +N
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVN 102
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 30.7 bits (66), Expect = 0.005
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Frame = +1
Query: 43 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 210
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 211 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLN 309
D RL++ G T V SE +W PD +N
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVN 102
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 22.6 bits (46), Expect = 1.4
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +1
Query: 118 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 279
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 280 LWRPDVVLLNA 312
LW+PD LNA
Sbjct: 71 LWQPDPYFLNA 81
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 1.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 261 PSAAAPLPCVPTQS 220
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 21.4 bits (43), Expect = 3.3
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 268 TPAKCCSPTPLRSNSVVCRSNSFED 194
TP + + PL + V CR+N E+
Sbjct: 26 TPRRKKNKKPLPTECVFCRNNGEEE 50
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 21.0 bits (42), Expect = 4.3
Identities = 17/59 (28%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = +1
Query: 154 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATT 324
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVT 101
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.0 bits (42), Expect = 4.3
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 274 ERLWRPDVVLLNAAATT 324
+ +WRPD NA + T
Sbjct: 116 KNMWRPDSFFKNAKSVT 132
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 4.3
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 259 KCCSPTPLRSNSVVCRSNSFE 197
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQ 225
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 4.3
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 259 KCCSPTPLRSNSVVCRSNSFE 197
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQ 225
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 4.3
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 259 KCCSPTPLRSNSVVCRSNSFE 197
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQ 225
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 4.3
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 259 KCCSPTPLRSNSVVCRSNSFE 197
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLGSRSRSFQ 225
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 4.3
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 259 KCCSPTPLRSNSVVCRSNSFE 197
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQ 225
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 4.3
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 259 KCCSPTPLRSNSVVCRSNSFE 197
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQ 225
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.0 bits (42), Expect = 4.3
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 259 KCCSPTPLRSNSVVCRSNSFE 197
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQ 225
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.0 bits (42), Expect = 4.3
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -3
Query: 259 KCCSPTPLRSNSVVCRSNSFE 197
K C + SNS+ RS SF+
Sbjct: 205 KTCKKYAISSNSLRSRSRSFQ 225
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 20.2 bits (40), Expect = 7.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +3
Query: 81 RNVRSGLPPRLQNRS 125
R R L PR++NRS
Sbjct: 729 RQHRDSLSPRVENRS 743
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 19.8 bits (39), Expect = 9.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 294 RGTAKRGCNHRRGLRSPR 347
RGT K+GC G+ S +
Sbjct: 343 RGTLKKGCLLVSGIASAK 360
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,114
Number of Sequences: 438
Number of extensions: 2243
Number of successful extensions: 57
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8184330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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