Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0173
         (376 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   1.3  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    21   4.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   5.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   5.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   5.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   5.4  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   5.4  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    20   7.2  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    20   7.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   9.5  
AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    20   9.5  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    20   9.5  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    20   9.5  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      20   9.5  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      20   9.5  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    20   9.5  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 16/59 (27%), Positives = 24/59 (40%)
 Frame = +3

Query: 78  VIFKA*LRLSKMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPGSK 254
           ++F+  L  S  T+   Q++ S        G G+D  E    E    GD  S  A  S+
Sbjct: 654 LLFETALLSSGFTLDEPQVHASRIYRMIKLGLGIDEEEAMITEDAQGGDAPSADAAESE 712


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +1

Query: 307 PGLCGGPDVPAHGSAPPGGVP 369
           P L GGP  P  GS    G P
Sbjct: 130 PCLSGGPKHPDPGSLQVPGAP 150


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 267  TELSVCCRERSE 232
            TEL++CC ++ E
Sbjct: 1360 TELNLCCTKKKE 1371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 267  TELSVCCRERSE 232
            TEL++CC ++ E
Sbjct: 1360 TELNLCCTKKKE 1371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 267  TELSVCCRERSE 232
            TEL++CC ++ E
Sbjct: 1360 TELNLCCTKKKE 1371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -2

Query: 267  TELSVCCRERSE 232
            TEL++CC ++ E
Sbjct: 1360 TELNLCCTKKKE 1371


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory
          receptor candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 34 IPLRPNGLRRNFSPKLF 84
          I +R NGL  NF+ K +
Sbjct: 40 INIRKNGLNYNFTKKCY 56


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = -1

Query: 325 DHHRGPAPRH-SEKHSASEADRAERLLPGA 239
           D HR   PRH  E+H    A  +  ++P A
Sbjct: 252 DDHRDRPPRHFHEEHDTRRAS-SRGIIPRA 280


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 372 AGHPSGRCRAVSRDIRTTTEAR 307
           AG+P+G  R   R+  T T A+
Sbjct: 59  AGYPAGNQRKQRRERTTFTRAQ 80


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -2

Query: 324  TTTEARRPGTARNTRRPKPTELSVCCRERSETP 226
            +TT +  PG+  N    +PTE        SE P
Sbjct: 1353 STTTSWNPGSTTNYPEWQPTEWHPPIPPTSEKP 1385


>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 300 GTARNTRRPKPTELSVCCRERSETP 226
           G  +NT+R +   L + C E+  +P
Sbjct: 19  GRGQNTQRVQNQPLVIGCDEKHVSP 43


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 304 APGLCGGPDV 333
           APG+C G D+
Sbjct: 418 APGVCHGDDI 427


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 304 APGLCGGPDV 333
           APG+C G D+
Sbjct: 420 APGVCHGDDI 429


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 304 APGLCGGPDV 333
           APG+C G D+
Sbjct: 418 APGVCHGDDI 427


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 304 APGLCGGPDV 333
           APG+C G D+
Sbjct: 420 APGVCHGDDI 429


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -2

Query: 315 EARRPGTARNTRRPKPTELSVCCRERSET 229
           EA+      N  R KP   SV C  + +T
Sbjct: 57  EAQARKHTLNCHRMKPALFSVLCEIKEKT 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,285
Number of Sequences: 336
Number of extensions: 1943
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7828090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)