Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0169
         (722 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-914|AAF52246.1|  593|Drosophila melanogaster CG12512-PA...    30   3.7  
AY075477-1|AAL68289.1|  596|Drosophila melanogaster RE36966p pro...    29   6.4  
AE014296-2534|AAF49618.1|  596|Drosophila melanogaster CG7739-PA...    29   6.4  

>AE014134-914|AAF52246.1|  593|Drosophila melanogaster CG12512-PA
           protein.
          Length = 593

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 19/44 (43%), Positives = 25/44 (56%)
 Frame = +1

Query: 256 EHHR*QEQFQHRTIKQ*LHLSTSNCMDV*IYLYI*KCYEEKRYT 387
           +HH  ++   +RTI Q L LS SN  DV     I  C+E KRY+
Sbjct: 36  KHHIGKDPLVYRTIGQQLELSASNFGDV---EAIVSCHEGKRYS 76


>AY075477-1|AAL68289.1|  596|Drosophila melanogaster RE36966p
           protein.
          Length = 596

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 404 KLIISTSVVFGGTCLVASYVITLL 475
           KLI+ + V  GGTCLV  ++I +L
Sbjct: 549 KLILMSVVALGGTCLVIVFIILVL 572


>AE014296-2534|AAF49618.1|  596|Drosophila melanogaster CG7739-PA
           protein.
          Length = 596

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 404 KLIISTSVVFGGTCLVASYVITLL 475
           KLI+ + V  GGTCLV  ++I +L
Sbjct: 549 KLILMSVVALGGTCLVIVFIILVL 572


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,512,017
Number of Sequences: 53049
Number of extensions: 560931
Number of successful extensions: 1447
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1443
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)