BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0164
(641 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0003 + 30921197-30921388,30921514-30921632,30921742-309218... 38 0.009
07_03_1570 + 27797315-27797409,27797519-27797551,27798135-277981... 36 0.027
01_06_1422 + 37234720-37235208 33 0.19
05_05_0020 - 21560896-21561352,21563399-21563480,21564143-215642... 33 0.25
03_06_0145 - 31973924-31975837 32 0.34
01_06_0923 + 33044283-33044433,33044826-33045242,33046209-330465... 32 0.45
07_03_0971 + 23038409-23039134,23040321-23040611 31 0.78
03_06_0640 + 35230664-35231065,35231957-35232202 31 0.78
11_06_0726 - 26707605-26708036 31 1.0
02_03_0246 - 16807619-16808145,16808208-16808868 31 1.0
05_01_0184 - 1298640-1298751,1298936-1299027,1299695-1299910,130... 30 1.4
05_01_0182 + 1284900-1285469,1285604-1286612,1286698-1287107 30 1.4
10_08_0491 - 18283404-18283482,18283590-18283658,18283767-182838... 30 1.8
06_01_0297 - 2162632-2162651,2162718-2162788,2162962-2163314 30 1.8
03_05_0724 - 27147479-27147706,27147830-27147920,27148002-271480... 30 1.8
03_06_0584 + 34909800-34910261 29 3.1
02_05_0081 + 25671014-25671200,25672490-25672796,25673508-256736... 29 3.1
01_07_0349 + 42939178-42939551,42939752-42939904,42940289-42940982 29 3.1
09_03_0094 + 12315923-12316237,12316347-12317504 29 4.1
07_01_0745 + 5691926-5692095,5692654-5692735,5693256-5693334,569... 29 4.1
01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411 29 4.1
07_01_0457 - 3468419-3468585,3469674-3469842,3470339-3470384,347... 28 5.5
06_01_1135 - 9379361-9381018,9381356-9381665,9381811-9382764 28 5.5
03_06_0137 - 31937541-31939892 28 5.5
07_03_1298 - 25592788-25592890,25593126-25593229,25593747-255938... 28 7.2
04_03_0860 + 20377577-20377948,20378440-20378505,20379411-203794... 28 7.2
02_03_0191 + 16204019-16204357 28 7.2
08_01_0032 - 235779-236198 27 9.6
07_03_1013 + 23299569-23300630 27 9.6
03_05_1069 + 30118930-30120120 27 9.6
02_01_0790 + 5925048-5925165,5926133-5926268,5926832-5926913,592... 27 9.6
>03_06_0003 +
30921197-30921388,30921514-30921632,30921742-30921811,
30922078-30922161,30922258-30922344,30922431-30922501,
30922648-30922702,30923374-30923509,30925009-30925103,
30925203-30925357,30925435-30925543,30925761-30925817,
30925913-30926027,30926177-30926264,30926738-30927501,
30927600-30927688,30928315-30928422,30928550-30928657,
30928887-30928977,30929235-30929287,30929557-30929712,
30930763-30930825,30931491-30931535,30932075-30932130,
30933051-30933132,30933238-30933354,30933428-30933530,
30933912-30934062,30934180-30934417,30934564-30934764,
30934850-30934935,30935036-30935135
Length = 1347
Score = 37.5 bits (83), Expect = 0.009
Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 18/143 (12%)
Frame = +1
Query: 238 MIISQLYYDGYQPIAATLAAAVHAD--PPCP------PSDRLLNVMMVGLQHEPDRKDRL 393
+I++ L AA +AAA PP P P+++LL ++ GL E + R
Sbjct: 17 LIVAHLRDHNLTQAAAAVAAATMTPLAPPEPDGDDSVPANQLLRLVAKGLAVEREETGRG 76
Query: 394 -----AASNAAEH-----LLGTTGFDLEYEMDASSLAPEPATYETAYVTSHKMSCRAGAF 543
+A+ AA + LGT D + D + +E +V+ HK R F
Sbjct: 77 GGAFDSAAAAAGYGGLLPPLGTNAVDFSTQ-DVKGSSKSFPKHEARHVSDHKNVVRCAKF 135
Query: 544 SHCGQLVATGSVDASIKILDVGE 612
S G+ A+GS D SIK +V +
Sbjct: 136 SPDGKYFASGSGDTSIKFFEVAK 158
>07_03_1570 +
27797315-27797409,27797519-27797551,27798135-27798199,
27798406-27798493,27798579-27798651,27798975-27799081,
27799595-27799637,27799760-27799816,27799905-27799981,
27800221-27800266,27800364-27800410,27800498-27800571,
27800656-27800711,27800885-27801011,27801133-27801206
Length = 353
Score = 35.9 bits (79), Expect = 0.027
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1
Query: 511 SHKMSCRAGAFSHCGQLVATGSVDASIKILDV 606
SHK SCRA F G ++ TGS D SI DV
Sbjct: 49 SHKESCRAVRFVESGNVILTGSADCSILASDV 80
>01_06_1422 + 37234720-37235208
Length = 162
Score = 33.1 bits (72), Expect = 0.19
Identities = 28/73 (38%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Frame = +1
Query: 388 RLAASNAAEH---LLGTTGFDLEYEMDASSL---APEPATYETAYVTSHKMSCRAGAFSH 549
R AS AA H L+G G + E E+ + A E A E Y SCRAG+ S
Sbjct: 59 RFRASAAAVHKVKLIGPDGAESELEVPEDTYVLDAAEEAGLELPY------SCRAGSCST 112
Query: 550 CGQLVATGSVDAS 588
C +A+G VD S
Sbjct: 113 CAGKLASGEVDQS 125
>05_05_0020 - 21560896-21561352,21563399-21563480,21564143-21564263,
21564424-21565074,21565206-21565338,21565677-21565728,
21566115-21566244,21567241-21567300,21567444-21567536,
21567795-21567919,21568263-21568353,21568828-21569127,
21569415-21570038
Length = 972
Score = 32.7 bits (71), Expect = 0.25
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = +1
Query: 418 LLGTTGFDLEYEMDASSLAPEPATYETAYVTSHKMSCRAGAFSHCGQLVATGSVDAS 588
L+G G + E+E + E A ETA V SCRAG+ S C +++G VD S
Sbjct: 882 LIGPDGVEHEFEAPEDTYILEAA--ETAGVEL-PFSCRAGSCSTCAGKMSSGEVDQS 935
>03_06_0145 - 31973924-31975837
Length = 637
Score = 32.3 bits (70), Expect = 0.34
Identities = 33/124 (26%), Positives = 47/124 (37%)
Frame = +1
Query: 253 LYYDGYQPIAATLAAAVHADPPCPPSDRLLNVMMVGLQHEPDRKDRLAASNAAEHLLGTT 432
L+YDG P+ A +AAA A PP PP G D + AA + TT
Sbjct: 70 LFYDG--PLGAVVAAAAAAAPPAPPKFVKEVRYSYGEALSIGGGDEIKQRPAASEIEATT 127
Query: 433 GFDLEYEMDASSLAPEPATYETAYVTSHKMSCRAGAFSHCGQLVATGSVDASIKILDVGE 612
E +DA+S A V + C H + G+ I ++DV +
Sbjct: 128 ----ERSIDAASQEDTSCEIGNAGV----VICDGDVVEHTADVDGGGATTDDISVVDVTD 179
Query: 613 DARE 624
A +
Sbjct: 180 VAEQ 183
>01_06_0923 +
33044283-33044433,33044826-33045242,33046209-33046538,
33046806-33046876,33047283-33047357,33047435-33047578,
33047645-33047816,33047933-33048616,33048711-33048767,
33048850-33048956,33049485-33049610,33050221-33050295,
33050387-33050499,33050789-33050905,33051384-33051444,
33051690-33051763,33052267-33052388,33052472-33052620,
33053525-33053635,33053946-33054008,33054689-33054722,
33055253-33055375,33055971-33056033,33056130-33056196,
33056311-33056356,33056446-33056552,33056923-33056971,
33057208-33057273,33057544-33057630
Length = 1286
Score = 31.9 bits (69), Expect = 0.45
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +1
Query: 505 VTSHKMSCRAGAFSHCGQLVATGSVDASIKILDV 606
+T H+ SC + F G+ A+GS D +KI D+
Sbjct: 194 LTGHRSSCTSVEFHPFGEFFASGSSDTDLKIWDI 227
>07_03_0971 + 23038409-23039134,23040321-23040611
Length = 338
Score = 31.1 bits (67), Expect = 0.78
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 508 TSHKMSCRAGAFSHCGQLVATGSVDASIKILDVGEDAREISSRG 639
T H + FS CG+L+AT S+D ++ +L A + RG
Sbjct: 22 TPHSRAVSCVRFSPCGRLLATASLDGTVALLSPSSLAAIATLRG 65
>03_06_0640 + 35230664-35231065,35231957-35232202
Length = 215
Score = 31.1 bits (67), Expect = 0.78
Identities = 20/57 (35%), Positives = 25/57 (43%)
Frame = +1
Query: 265 GYQPIAATLAAAVHADPPCPPSDRLLNVMMVGLQHEPDRKDRLAASNAAEHLLGTTG 435
G A LA PPCPP R M+V L+ + ++RLA E LL G
Sbjct: 85 GMSAAEAALALEEREMPPCPPGLRQYETMVV-LRPDMSEEERLALIQRYEELLVAGG 140
>11_06_0726 - 26707605-26708036
Length = 143
Score = 30.7 bits (66), Expect = 1.0
Identities = 24/78 (30%), Positives = 33/78 (42%)
Frame = +1
Query: 391 LAASNAAEHLLGTTGFDLEYEMDASSLAPEPATYETAYVTSHKMSCRAGAFSHCGQLVAT 570
+ S AA TTG E A+ + P P + T A AF+ G+ AT
Sbjct: 18 ILGSRAAASAFATTG-----EASATGVPPPPHLIASVTATILGSCAAASAFATTGEANAT 72
Query: 571 GSVDASIKILDVGEDARE 624
GS A+ + L V + RE
Sbjct: 73 GSAPAA-RCLSVAQQERE 89
>02_03_0246 - 16807619-16808145,16808208-16808868
Length = 395
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = -2
Query: 568 WPPAVRSD*RLQPGRTSCAKSRMPSHTWPAQGP---GRKRPFRTPS 440
WP R RL SC SRM + WP + P GR+R +PS
Sbjct: 87 WPRMTRG--RLPGLSRSCRSSRMAARCWPCRPPCCCGRRRRAASPS 130
>05_01_0184 -
1298640-1298751,1298936-1299027,1299695-1299910,
1300045-1300614
Length = 329
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = -2
Query: 565 PPAVRSD*RLQPGRTSCAKSRMPSHTWPAQGPGRKRPFRTPSQNRLCPKDA--RQHSMQP 392
P A S RLQ SC + + W PG + PS+ +L P A QH + P
Sbjct: 70 PKASPSAARLQKPAASCHGGQPKASPWAGSPPGAATHLQQPSRMKLSPSPAPGAQH-LPP 128
Query: 391 AYLSCLA 371
A S LA
Sbjct: 129 AKPSPLA 135
>05_01_0182 + 1284900-1285469,1285604-1286612,1286698-1287107
Length = 662
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = -2
Query: 565 PPAVRSD*RLQPGRTSCAKSRMPSHTWPAQGPGRKRPFRTPSQNRLCPKDA--RQHSMQP 392
P A S RLQ SC + + W PG + PS+ +L P A QH + P
Sbjct: 70 PKASPSAARLQKPAASCHGGQPKASPWAGSPPGAATHLQQPSRMKLSPSPAPGAQH-LPP 128
Query: 391 AYLSCLA 371
A S LA
Sbjct: 129 AKPSPLA 135
>10_08_0491 -
18283404-18283482,18283590-18283658,18283767-18283883,
18283953-18284068,18284149-18284223,18284248-18284430,
18284530-18284591,18284668-18285606,18285723-18285846,
18285917-18286060,18286151-18286225,18286359-18286382,
18287025-18287095,18287305-18287407,18287555-18287781,
18287910-18288027,18288220-18288311,18288793-18288874
Length = 899
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 508 TSHKMSCRAGAFSHCGQLVATGSVDASIKILDV 606
T H+ SC + F G+ A+GS D ++KI D+
Sbjct: 103 TGHRSSCASLDFHPFGEFFASGSSDTNMKIWDM 135
>06_01_0297 - 2162632-2162651,2162718-2162788,2162962-2163314
Length = 147
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 525 LPGWSLQSLRTAGGHWQCRCQYQDFRCGRGC 617
+PG L SL G W C C Y +F C
Sbjct: 43 VPGGVLTSLDIRPGDWYCNCGYHNFASRASC 73
>03_05_0724 -
27147479-27147706,27147830-27147920,27148002-27148060,
27148197-27148312,27148389-27148472,27148677-27148824,
27148958-27149103,27149610-27149729,27149900-27149998,
27150787-27150828,27150915-27151017
Length = 411
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 514 HKMSCRAGAFSHCGQLVATGSVDASIKILD 603
H + G F+ G+L+ TGS DAS++I D
Sbjct: 207 HSSTVTCGDFTPDGKLICTGSDDASLRIWD 236
>03_06_0584 + 34909800-34910261
Length = 153
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = +1
Query: 523 SCRAGAFSHCGQLVATGSVDAS 588
SCRAGA S C + GSVD S
Sbjct: 95 SCRAGACSTCAGKIEAGSVDQS 116
>02_05_0081 +
25671014-25671200,25672490-25672796,25673508-25673637,
25677283-25677477
Length = 272
Score = 29.1 bits (62), Expect = 3.1
Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 1/66 (1%)
Frame = +2
Query: 380 GKIGWLH-RMLPSIFWAQPVLTWSTKWTLPPWPLSRPRMRRHT*LRTRCPAGLEPSVTAD 556
G IG + + S W W W+L P PL P R T L TR + V
Sbjct: 199 GDIGSMQLKQANSAQWQDMKHIWGATWSLTPGPLVGPFSVRLTTLTTRQTLSAQ-DVIPK 257
Query: 557 SWWPLA 574
+W P A
Sbjct: 258 NWTPKA 263
>01_07_0349 + 42939178-42939551,42939752-42939904,42940289-42940982
Length = 406
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +1
Query: 301 VHADPPCPPSDRLLNVMMV----GLQHEPDRKDRLAASNAAEHLLGTTGFDLEYEMDASS 468
+H DPP PP + MM+ +Q + D+L A +HL+ D Y ++ SS
Sbjct: 257 LHDDPPPPPPPPEMTTMMIMQSFSIQQQQHDDDQLLQPAADDHLMVQAPPDDCYNINGSS 316
>09_03_0094 + 12315923-12316237,12316347-12317504
Length = 490
Score = 28.7 bits (61), Expect = 4.1
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 235 RMIISQLYYDGYQPIAATLAAAVHADPP 318
R++++Q+ P+AA L A+H DPP
Sbjct: 303 RIVLAQVSSGSAVPLAAVLLLALHGDPP 330
>07_01_0745 +
5691926-5692095,5692654-5692735,5693256-5693334,
5693452-5693543,5693895-5693982,5694099-5694208,
5694399-5694515,5694883-5695034,5699134-5699229,
5699308-5699383,5699481-5699534
Length = 371
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/72 (27%), Positives = 34/72 (47%)
Frame = +1
Query: 412 EHLLGTTGFDLEYEMDASSLAPEPATYETAYVTSHKMSCRAGAFSHCGQLVATGSVDASI 591
+ +GTTG +++ E S+AP T M+C G L+A+GS D ++
Sbjct: 265 DKFVGTTGKNMKSETSMVSIAPRVKPELTL-----PMTCE-------GALLASGSADCTV 312
Query: 592 KILDVGEDAREI 627
K+ DV + +
Sbjct: 313 KLWDVASSTKTL 324
>01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411
Length = 885
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/92 (22%), Positives = 45/92 (48%)
Frame = +1
Query: 301 VHADPPCPPSDRLLNVMMVGLQHEPDRKDRLAASNAAEHLLGTTGFDLEYEMDASSLAPE 480
V A PP P++ + ++ +HE D +++S+AA+ + G L D ++++
Sbjct: 241 VVAQPPVLPAETEWDNVITSSRHEKHSIDTISSSDAADVVSGDAIVVLRSGFDDANVS-R 299
Query: 481 PATYETAYVTSHKMSCRAGAFSHCGQLVATGS 576
++ A HK R S+C ++ ++G+
Sbjct: 300 SSSGADAMPKDHK--ARTDRLSNCSRMRSSGA 329
>07_01_0457 -
3468419-3468585,3469674-3469842,3470339-3470384,
3470671-3470753,3471395-3471474,3472320-3472428,
3472667-3472735,3472874-3472924,3473059-3473184,
3473312-3473435,3473617-3473672,3473790-3473854,
3474438-3474513,3475050-3475108,3475275-3475365,
3475490-3475990
Length = 623
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 205 NVVKNRELLYRMIISQLYYDGYQPIAATLAAAVHAD 312
+V + + +LY S Y +G+ AA LAA + AD
Sbjct: 273 SVEQTKNMLYSYFTSDTYANGHSACAAKLAAGICAD 308
>06_01_1135 - 9379361-9381018,9381356-9381665,9381811-9382764
Length = 973
Score = 28.3 bits (60), Expect = 5.5
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = -2
Query: 550 SD*RLQPGRTSCAKSRMPSHTWPAQGPGRKRPFRTPSQNRLCPKDARQHSMQPAYLSCLA 371
S+ + +P + + + +HT RK P P+Q RLCP + PA CLA
Sbjct: 775 SEEQRRPKKKNILRRLRDAHTGRVHDNNRKPP-PPPAQGRLCP--VHRGVCSPATTFCLA 831
Query: 370 HA 365
A
Sbjct: 832 EA 833
>03_06_0137 - 31937541-31939892
Length = 783
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/53 (22%), Positives = 25/53 (47%)
Frame = +2
Query: 293 QQPYTLTLRVLPATGCSMS*WWVYSMSQTGKIGWLHRMLPSIFWAQPVLTWST 451
+Q + +R L S+S + +++G W RM + W + +TW++
Sbjct: 430 KQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTS 482
>07_03_1298 -
25592788-25592890,25593126-25593229,25593747-25593808,
25593957-25594065,25594215-25594355,25594707-25594769,
25594974-25595084,25596140-25596457
Length = 336
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 498 GIRDFAQDVLPGWSLQSLRTAGGH 569
GI A D +PGWSL SL+ + H
Sbjct: 120 GIGKCADDAVPGWSLASLKPSYYH 143
>04_03_0860 +
20377577-20377948,20378440-20378505,20379411-20379492,
20380142-20380362
Length = 246
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +1
Query: 523 SCRAGAFSHCGQLVATGSVDAS 588
SCRAGA S C V G VD S
Sbjct: 94 SCRAGACSTCAGKVVEGGVDQS 115
>02_03_0191 + 16204019-16204357
Length = 112
Score = 27.9 bits (59), Expect = 7.2
Identities = 10/40 (25%), Positives = 21/40 (52%)
Frame = +1
Query: 142 YSRFITILIKMKEDNVDIDTKNVVKNRELLYRMIISQLYY 261
Y R I +KM +D D++ ++ R+ Y +++ + Y
Sbjct: 36 YDRMIARRVKMALRRLDFDSRKILDRRQTPYSVVVDETNY 75
>08_01_0032 - 235779-236198
Length = 139
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 523 SCRAGAFSHCGQLVATGSVDAS 588
SCRAG+ S C V +G +D S
Sbjct: 81 SCRAGSCSSCAGKVVSGEIDQS 102
>07_03_1013 + 23299569-23300630
Length = 353
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 313 PPCPPSDRLLNVMMVGLQHEPDRKDRL 393
PPCP D+ L ++ LQ E D ++ L
Sbjct: 62 PPCPYEDQELRILQAPLQCEVDAQETL 88
>03_05_1069 + 30118930-30120120
Length = 396
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 559 LVATGSVDASIKILDVGEDAREISSRG 639
+V +GS+D SIK+ V EDA + RG
Sbjct: 344 IVYSGSLDKSIKVWRVAEDAPDALLRG 370
>02_01_0790 +
5925048-5925165,5926133-5926268,5926832-5926913,
5927772-5927947,5928594-5928680,5928817-5928956,
5929546-5929784
Length = 325
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 457 DASSLAPEPATYETAYVTSHKMSCRAGAFSHCGQLVATGSVDASIKILDV 606
D S+ + T E + HK RA AFS L+ TG ++ ++I D+
Sbjct: 82 DFSAKVWDALTGEELHSFEHKHIVRACAFSEDTHLLLTGGLEKILRIYDM 131
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,658,171
Number of Sequences: 37544
Number of extensions: 398932
Number of successful extensions: 1327
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1325
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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