BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0164
(641 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094802-1|AAM11155.1| 424|Drosophila melanogaster LD24780p pro... 152 4e-37
AE014297-4788|AAN14284.1| 318|Drosophila melanogaster CG2261-PB... 152 4e-37
AE014297-4787|AAF57183.1| 424|Drosophila melanogaster CG2261-PA... 152 4e-37
U06460-1|AAC46481.1| 704|Drosophila melanogaster transcription ... 35 0.082
AY051960-1|AAK93384.1| 704|Drosophila melanogaster LD42828p pro... 35 0.082
AE013599-1190|AAF58737.1| 704|Drosophila melanogaster CG7704-PA... 35 0.082
BT004841-1|AAO45197.1| 358|Drosophila melanogaster RH17413p pro... 31 1.8
AE014298-1137|AAF46336.1| 358|Drosophila melanogaster CG10763-P... 31 1.8
BT024267-1|ABC86329.1| 604|Drosophila melanogaster IP15590p pro... 30 3.1
AY058742-1|AAL13971.1| 419|Drosophila melanogaster LP08352p pro... 30 3.1
AE014297-4455|AAF56951.3| 419|Drosophila melanogaster CG31033-P... 30 3.1
AE014297-4454|AAF56950.3| 445|Drosophila melanogaster CG31033-P... 30 3.1
AE014297-4453|AAF56952.3| 604|Drosophila melanogaster CG31033-P... 30 3.1
BT022483-1|AAY54899.1| 199|Drosophila melanogaster IP07952p pro... 29 4.1
AE014297-4400|AAF56906.1| 436|Drosophila melanogaster CG7568-PA... 29 4.1
BT011095-1|AAR82761.1| 398|Drosophila melanogaster RE32047p pro... 29 5.4
AE013599-3730|AAF47100.1| 348|Drosophila melanogaster CG2812-PA... 29 5.4
AF247768-1|AAF86228.1| 809|Drosophila melanogaster Toll-4 protein. 29 7.1
AE014134-1604|AAF52747.3| 1125|Drosophila melanogaster CG18241-P... 29 7.1
AY060846-1|AAL28394.1| 425|Drosophila melanogaster GM02567p pro... 28 9.4
AE014296-2446|AAF49689.1| 425|Drosophila melanogaster CG5114-PA... 28 9.4
>AY094802-1|AAM11155.1| 424|Drosophila melanogaster LD24780p
protein.
Length = 424
Score = 152 bits (368), Expect = 4e-37
Identities = 83/138 (60%), Positives = 103/138 (74%)
Frame = +1
Query: 193 IDTKNVVKNRELLYRMIISQLYYDGYQPIAATLAAAVHADPPCPPSDRLLNVMMVGLQHE 372
+D N+VKNRE+LYR++ISQL YDG + A L+ V AD C PS+RLL+VM+ G+Q
Sbjct: 6 LDPSNLVKNREILYRLMISQLMYDGLEKFAMELSMLVKADQ-CAPSERLLHVMIAGMQTL 64
Query: 373 PDRKDRLAASNAAEHLLGTTGFDLEYEMDASSLAPEPATYETAYVTSHKMSCRAGAFSHC 552
D KD+ +N+ + L G DLE+E +AS+LAPEP +YETAYVTSHK +CRAGAFS
Sbjct: 65 SD-KDK---TNSDDVL---PGIDLEFEPEASALAPEPHSYETAYVTSHKQACRAGAFSCD 117
Query: 553 GQLVATGSVDASIKILDV 606
G LVATGSVDASIKILDV
Sbjct: 118 GSLVATGSVDASIKILDV 135
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 514 HKMSCRAGAFSHCGQLVATGSVDASIKILD 603
HK +S G+L ATGS D IKI D
Sbjct: 254 HKAGVTCVKYSPTGKLYATGSYDGDIKIWD 283
>AE014297-4788|AAN14284.1| 318|Drosophila melanogaster CG2261-PB,
isoform B protein.
Length = 318
Score = 152 bits (368), Expect = 4e-37
Identities = 83/138 (60%), Positives = 103/138 (74%)
Frame = +1
Query: 193 IDTKNVVKNRELLYRMIISQLYYDGYQPIAATLAAAVHADPPCPPSDRLLNVMMVGLQHE 372
+D N+VKNRE+LYR++ISQL YDG + A L+ V AD C PS+RLL+VM+ G+Q
Sbjct: 6 LDPSNLVKNREILYRLMISQLMYDGLEKFAMELSMLVKADQ-CAPSERLLHVMIAGMQTL 64
Query: 373 PDRKDRLAASNAAEHLLGTTGFDLEYEMDASSLAPEPATYETAYVTSHKMSCRAGAFSHC 552
D KD+ +N+ + L G DLE+E +AS+LAPEP +YETAYVTSHK +CRAGAFS
Sbjct: 65 SD-KDK---TNSDDVL---PGIDLEFEPEASALAPEPHSYETAYVTSHKQACRAGAFSCD 117
Query: 553 GQLVATGSVDASIKILDV 606
G LVATGSVDASIKILDV
Sbjct: 118 GSLVATGSVDASIKILDV 135
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 514 HKMSCRAGAFSHCGQLVATGSVDASIKILD 603
HK +S G+L ATGS D IKI D
Sbjct: 254 HKAGVTCVKYSPTGKLYATGSYDGDIKIWD 283
>AE014297-4787|AAF57183.1| 424|Drosophila melanogaster CG2261-PA,
isoform A protein.
Length = 424
Score = 152 bits (368), Expect = 4e-37
Identities = 83/138 (60%), Positives = 103/138 (74%)
Frame = +1
Query: 193 IDTKNVVKNRELLYRMIISQLYYDGYQPIAATLAAAVHADPPCPPSDRLLNVMMVGLQHE 372
+D N+VKNRE+LYR++ISQL YDG + A L+ V AD C PS+RLL+VM+ G+Q
Sbjct: 6 LDPSNLVKNREILYRLMISQLMYDGLEKFAMELSMLVKADQ-CAPSERLLHVMIAGMQTL 64
Query: 373 PDRKDRLAASNAAEHLLGTTGFDLEYEMDASSLAPEPATYETAYVTSHKMSCRAGAFSHC 552
D KD+ +N+ + L G DLE+E +AS+LAPEP +YETAYVTSHK +CRAGAFS
Sbjct: 65 SD-KDK---TNSDDVL---PGIDLEFEPEASALAPEPHSYETAYVTSHKQACRAGAFSCD 117
Query: 553 GQLVATGSVDASIKILDV 606
G LVATGSVDASIKILDV
Sbjct: 118 GSLVATGSVDASIKILDV 135
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +1
Query: 514 HKMSCRAGAFSHCGQLVATGSVDASIKILD 603
HK +S G+L ATGS D IKI D
Sbjct: 254 HKAGVTCVKYSPTGKLYATGSYDGDIKIWD 283
>U06460-1|AAC46481.1| 704|Drosophila melanogaster transcription
initiation factorTFIID 85 kDa subunit protein.
Length = 704
Score = 35.1 bits (77), Expect = 0.082
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +1
Query: 505 VTSHKMSCRAGAFSHCGQLVATGSVDASIKILDV 606
+T HK S + AFS CG+ +A+GSVD +I I D+
Sbjct: 572 MTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDL 605
>AY051960-1|AAK93384.1| 704|Drosophila melanogaster LD42828p
protein.
Length = 704
Score = 35.1 bits (77), Expect = 0.082
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +1
Query: 505 VTSHKMSCRAGAFSHCGQLVATGSVDASIKILDV 606
+T HK S + AFS CG+ +A+GSVD +I I D+
Sbjct: 572 MTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDL 605
>AE013599-1190|AAF58737.1| 704|Drosophila melanogaster CG7704-PA
protein.
Length = 704
Score = 35.1 bits (77), Expect = 0.082
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +1
Query: 505 VTSHKMSCRAGAFSHCGQLVATGSVDASIKILDV 606
+T HK S + AFS CG+ +A+GSVD +I I D+
Sbjct: 572 MTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDL 605
>BT004841-1|AAO45197.1| 358|Drosophila melanogaster RH17413p
protein.
Length = 358
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 514 HKMSCRAGAFSHCGQLVATGSVDASIKILDVGEDAREIS 630
H+ + F CG +ATGS D+S ++ D+ D RE++
Sbjct: 243 HQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRAD-REVA 280
>AE014298-1137|AAF46336.1| 358|Drosophila melanogaster CG10763-PA
protein.
Length = 358
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 514 HKMSCRAGAFSHCGQLVATGSVDASIKILDVGEDAREIS 630
H+ + F CG +ATGS D+S ++ D+ D RE++
Sbjct: 243 HQSDVNSVKFHPCGDAIATGSDDSSCRLYDMRAD-REVA 280
>BT024267-1|ABC86329.1| 604|Drosophila melanogaster IP15590p
protein.
Length = 604
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +1
Query: 511 SHKMSCRAGAFSHCGQLVATGSVDASIKILDVGEDARE 624
+H+ A +S ++VATG D +K+ D+G+++ E
Sbjct: 316 AHENESHAVRWSPVERMVATGGADRKVKLWDIGKNSTE 353
>AY058742-1|AAL13971.1| 419|Drosophila melanogaster LP08352p
protein.
Length = 419
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +1
Query: 511 SHKMSCRAGAFSHCGQLVATGSVDASIKILDVGEDARE 624
+H+ A +S ++VATG D +K+ D+G+++ E
Sbjct: 131 AHENESHAVRWSPVERMVATGGADRKVKLWDIGKNSTE 168
>AE014297-4455|AAF56951.3| 419|Drosophila melanogaster CG31033-PA,
isoform A protein.
Length = 419
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +1
Query: 511 SHKMSCRAGAFSHCGQLVATGSVDASIKILDVGEDARE 624
+H+ A +S ++VATG D +K+ D+G+++ E
Sbjct: 131 AHENESHAVRWSPVERMVATGGADRKVKLWDIGKNSTE 168
>AE014297-4454|AAF56950.3| 445|Drosophila melanogaster CG31033-PB,
isoform B protein.
Length = 445
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +1
Query: 511 SHKMSCRAGAFSHCGQLVATGSVDASIKILDVGEDARE 624
+H+ A +S ++VATG D +K+ D+G+++ E
Sbjct: 157 AHENESHAVRWSPVERMVATGGADRKVKLWDIGKNSTE 194
>AE014297-4453|AAF56952.3| 604|Drosophila melanogaster CG31033-PC,
isoform C protein.
Length = 604
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +1
Query: 511 SHKMSCRAGAFSHCGQLVATGSVDASIKILDVGEDARE 624
+H+ A +S ++VATG D +K+ D+G+++ E
Sbjct: 316 AHENESHAVRWSPVERMVATGGADRKVKLWDIGKNSTE 353
>BT022483-1|AAY54899.1| 199|Drosophila melanogaster IP07952p
protein.
Length = 199
Score = 29.5 bits (63), Expect = 4.1
Identities = 21/65 (32%), Positives = 25/65 (38%), Gaps = 3/65 (4%)
Frame = +2
Query: 299 PYTLTLRVLPATGCSMS*WWVYSMSQTGKIGWLHRMLPSIFWAQPVL---TWSTKWTLPP 469
P+T R P C+ W YS SQ K W I W P TW + W
Sbjct: 74 PWTECRRTQPIE-CARCPTWTYSASQRPKSQWTAPAPTVIAWWPPPASPRTWKSAWA--- 129
Query: 470 WPLSR 484
W +SR
Sbjct: 130 WVVSR 134
>AE014297-4400|AAF56906.1| 436|Drosophila melanogaster CG7568-PA
protein.
Length = 436
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 487 TYETAYVTSHKMSCRAGAFSHCGQLVATGSVDASIKILDV 606
++E +T H A F+ GQ++ TGS D S I DV
Sbjct: 226 SHELQQLTHHGAEVIAARFNRDGQMLLTGSFDHSAAIWDV 265
>BT011095-1|AAR82761.1| 398|Drosophila melanogaster RE32047p
protein.
Length = 398
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 514 HKMSCRAGAFSHCGQLVATGSVDASIKILDVGEDAREI 627
H+ S +S G+L+ATGS D +IK + D ++
Sbjct: 135 HRGSIYCTCWSRDGELIATGSNDKTIKYMRFNNDTNQL 172
>AE013599-3730|AAF47100.1| 348|Drosophila melanogaster CG2812-PA
protein.
Length = 348
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 514 HKMSCRAGAFSHCGQLVATGSVDASIKILDVGEDAREI 627
H+ S +S G+L+ATGS D +IK + D ++
Sbjct: 85 HRGSIYCTCWSRDGELIATGSNDKTIKYMRFNNDTNQL 122
>AF247768-1|AAF86228.1| 809|Drosophila melanogaster Toll-4 protein.
Length = 809
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 495 DGIRDFAQDVLPGWSLQSLRTAGGHWQCRCQYQDF 599
D +R F Q + LQ L G W CRC+ +DF
Sbjct: 535 DRVRGFLQKRMNSSQLQ-LSLFGNPWTCRCEDKDF 568
>AE014134-1604|AAF52747.3| 1125|Drosophila melanogaster CG18241-PA
protein.
Length = 1125
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 495 DGIRDFAQDVLPGWSLQSLRTAGGHWQCRCQYQDF 599
D +R F Q + LQ L G W CRC+ +DF
Sbjct: 851 DRVRGFLQKRMNSSQLQ-LSLFGNPWTCRCEDKDF 884
>AY060846-1|AAL28394.1| 425|Drosophila melanogaster GM02567p
protein.
Length = 425
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +1
Query: 478 EPATYETAY-VTSHKMSCRAGAFSHCGQLVATGSVDASIKILDVGE--DAREISSR 636
E +T + Y +T HK + FSH G +ATG + + + V E D R I ++
Sbjct: 114 ETSTGDVLYEITEHKDTVTETHFSHDGVYLATGDLAGDLFVFKVSEKHDERPILTK 169
>AE014296-2446|AAF49689.1| 425|Drosophila melanogaster CG5114-PA
protein.
Length = 425
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +1
Query: 478 EPATYETAY-VTSHKMSCRAGAFSHCGQLVATGSVDASIKILDVGE--DAREISSR 636
E +T + Y +T HK + FSH G +ATG + + + V E D R I ++
Sbjct: 114 ETSTGDVLYEITEHKDTVTETHFSHDGVYLATGDLAGDLFVFKVSEKHDERPILTK 169
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,034,177
Number of Sequences: 53049
Number of extensions: 642314
Number of successful extensions: 1741
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1735
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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