Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0163
(504 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 44 2e-05
SPAC26F1.10c |pyp1||tyrosine phosphatase Pyp1|Schizosaccharomyce... 36 0.003
SPAC24H6.05 |cdc25|sal2|serine/threonine protein phosphatase Cdc... 28 0.69
SPAC144.07c |||conserved eukaryotic protein|Schizosaccharomyces ... 27 1.2
SPAC22E12.13c |rpl2403|rpl24-3|60S ribosomal protein L24-3 |Schi... 27 1.2
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 25 4.9
SPAC3A12.03c |mug145||ubiquitin-protein ligase E3 |Schizosacchar... 25 4.9
SPBC211.04c |mcm6|mis5|MCM complex subunit Mcm6 |Schizosaccharom... 25 4.9
SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc... 25 6.5
SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyce... 25 8.5
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 25 8.5
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 25 8.5
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 43.6 bits (98), Expect = 2e-05
Identities = 24/67 (35%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Frame = +2
Query: 227 LVSKEWLLAKLRSDERDTV----LIDCRGSNEYSVSHIRSAVNFSIPTIMLRRLAAGKIE 394
L+SK+ + L+S E T +ID R ++Y+VSHI++A+N S+PT +LRR + +
Sbjct: 4 LLSKDEFNSTLKSFEEQTESVSWIIDLRLHSKYAVSHIKNAINVSLPTALLRRPSFDIGK 63
Query: 395 LSSTVQC 415
+ + ++C
Sbjct: 64 VFACIKC 70
>SPAC26F1.10c |pyp1||tyrosine phosphatase Pyp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 550
Score = 36.3 bits (80), Expect = 0.003
Identities = 15/35 (42%), Positives = 25/35 (71%)
Frame = +2
Query: 275 DTVLIDCRGSNEYSVSHIRSAVNFSIPTIMLRRLA 379
DT++ID R +E+S S I+ +VN S+P +++R A
Sbjct: 53 DTLIIDLRPVSEFSKSRIKGSVNLSLPATLIKRPA 87
>SPAC24H6.05 |cdc25|sal2|serine/threonine protein phosphatase
Cdc25|Schizosaccharomyces pombe|chr 1|||Manual
Length = 596
Score = 28.3 bits (60), Expect = 0.69
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +2
Query: 230 VSKEWLLAKLRSDERDT----VLIDCRGSNEYSVSHIRSAVNFS 349
+++E LL L +D ++IDCR EY HI +AVN +
Sbjct: 413 ITQETLLGLLDGKFKDIFDKCIIIDCRFEYEYLGGHISTAVNLN 456
>SPAC144.07c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 315
Score = 27.5 bits (58), Expect = 1.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 239 EWLLAKLRSDERDTVLIDCRGSNEYSVSH 325
EWLL +L+ V+ DC G E +H
Sbjct: 86 EWLLKELKKHRDSYVIFDCPGQVELFTNH 114
>SPAC22E12.13c |rpl2403|rpl24-3|60S ribosomal protein L24-3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 192
Score = 27.5 bits (58), Expect = 1.2
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +1
Query: 121 CRY*CNRVFKVVKSPCKQKKTVYYQDAYGFRMRMRPGVERMAPCK-VTFRRKRHRI-DRL 294
CR C++ FK+ ++P K T Y+ A+G M + A + V R R+ I L
Sbjct: 32 CRSKCHKNFKMKRNPRKVAWTKAYRKAHGKEMVYDTALAVTAARRNVPVRYDRNVIATTL 91
Query: 295 SGLKRVFCIAHPFRCELFH 351
+ +KRV + H R LF+
Sbjct: 92 NAMKRVSQV-HAKRERLFY 109
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 25.4 bits (53), Expect = 4.9
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Frame = +3
Query: 171 TEENSVL-SRC--LWIQNANATWCRKNGSLQSYVQ 266
++EN VL SRC +W+ N++ N SLQ Y+Q
Sbjct: 2261 SDENDVLISRCCTMWLSNSHLD--ELNNSLQHYLQ 2293
>SPAC3A12.03c |mug145||ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 25.4 bits (53), Expect = 4.9
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = +3
Query: 42 LILFSCVFLNKCVFVNFVYIHYYRGCM 122
++LF+ V + +F+NF + + R C+
Sbjct: 23 ILLFALVIILSVIFINFFFFYLCRCCV 49
>SPBC211.04c |mcm6|mis5|MCM complex subunit Mcm6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 892
Score = 25.4 bits (53), Expect = 4.9
Identities = 18/65 (27%), Positives = 28/65 (43%)
Frame = -3
Query: 349 GKVHSGTDVRYRILV*APTIYQYGVSFV*T*LCKEPFFRHQVAFAF*IHRHLDSTLFSSV 170
G+ + T +R I + AP + ++ + FV C E RH IHR D +
Sbjct: 588 GRYNRKTTLRNNINMSAPIMSRFDLFFVVLDECNESVDRHLAKHIVDIHRLRDDAMQPEF 647
Query: 169 YTDFL 155
T+ L
Sbjct: 648 STEQL 652
>SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 987
Score = 25.0 bits (52), Expect = 6.5
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Frame = +2
Query: 125 GIDATGYSKW*KVR--VNRRKQCTI-KMPMDSECECDLVSKE--WLLAKLRSDERDTVL 286
G+DAT YS W K V ++ CT+ + + DL ++ +L++++R+ RD V+
Sbjct: 648 GLDATAYSSWEKGDNFVTKKNVCTVMNLWVQKYFFEDLKARNTLYLISEMRTFLRDHVV 706
>SPAC27E2.09 |mak2|phk1|histidine kinase Mak2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2310
Score = 24.6 bits (51), Expect = 8.5
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 149 LNTLLHQYLHATSIIMNVHKIYKNTL 72
LNTL H Y + SI V K+ L
Sbjct: 1179 LNTLFHHYEYVMSIAQEVRKLVDGKL 1204
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 24.6 bits (51), Expect = 8.5
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 257 LRSDERDTVLIDCRGSNEYSVSHIRSAVNFS 349
+RS ERDT+ + R S ++ + +VNFS
Sbjct: 974 IRSFERDTIPLGFRKSALKCIAQLFQSVNFS 1004
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 24.6 bits (51), Expect = 8.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 27 FMLRHLILFSCVFLNKCVFVNFVYIHYYR 113
F+ HL + VFL+ C V FVY + R
Sbjct: 277 FIRTHLKFKTIVFLSSCKQVRFVYETFRR 305
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,079,667
Number of Sequences: 5004
Number of extensions: 42590
Number of successful extensions: 118
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 118
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 200198394
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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