Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0162
(705 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 48 1e-06
SPCC1840.04 |||caspase|Schizosaccharomyces pombe|chr 3|||Manual 34 0.023
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.092
SPAC26A3.08 |smb1|smb|Sm snRNP core protein Smb1|Schizosaccharom... 31 0.16
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.21
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.37
SPAC13G7.04c |mac1||membrane anchored protein Mac1 |Schizosaccha... 30 0.37
SPCC576.11 |rpl15||60S ribosomal protein L15|Schizosaccharomyces... 27 2.6
SPAC1783.08c |rpl1502|rpl15-2|60S ribosomal protein L15b|Schizos... 27 2.6
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 27 3.5
SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr ... 26 4.6
SPBC19G7.16 |iws1||transcription elongation factor complex subun... 25 8.0
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 48.4 bits (110), Expect = 1e-06
Identities = 55/226 (24%), Positives = 73/226 (32%), Gaps = 4/226 (1%)
Frame = +2
Query: 14 GPPHRGPEARGPPHHGPEMRALPNHGPEMRGPPNHGPEMRGPLNHGPEMRGPLTHGPEMR 193
G P P P P + A P+ P + P P + P P + P P +
Sbjct: 1058 GAPSAPPPVPAPSSEIPSIPA-PSGAPPVPAPSGIPPVPK-PSVAAPPVPKPSVAVPPVP 1115
Query: 194 SPSNHGPEMRGPPNHGPEMRGLPNHGPEMRGPSNHGPEMRGP----PNHGPEMRGPLNHG 361
+PS P + P P + +P+ P + PS P + P P P + P
Sbjct: 1116 APSG-APPVPKPSVAAPPVP-VPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPA 1173
Query: 362 PEMRSPPNHGPEMRSPPNHGPEMRGPPNHGPEMRGLPNHGPDMRGPSNHGPEMRGPPNHG 541
P PP P PP P PP P + G+P P P P PP
Sbjct: 1174 PSSGIPPVPKPAAGVPPVPPPS-EAPPVPKPSV-GVPPVPPPSTAPPVPTPSAGLPPVPV 1231
Query: 542 PEMRGPPNHRPEMRGPLNHGPEMRGPLNHGPEMRGPPNHGPEMRGP 679
P + PP P P P P H P + P
Sbjct: 1232 PTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASPSPTSSSMASAAP 1277
Score = 26.6 bits (56), Expect = 3.5
Identities = 28/110 (25%), Positives = 38/110 (34%), Gaps = 2/110 (1%)
Frame = +2
Query: 269 GPEMRGPSNHGPEMRGPPNHGPEMRGPLNHGPEMRSPPNHGPEMRSPPNHGPEMRGPPNH 448
G MR P+ ++ P N G + GP P PP + S P P PP+
Sbjct: 939 GSNMRLPT----KLTRPSNDGRKASGPRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPS- 993
Query: 449 GPEMRGLPNH--GPDMRGPSNHGPEMRGPPNHGPEMRGPPNHRPEMRGPL 592
P + + P R P + PP P PP P P+
Sbjct: 994 APLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPV 1043
>SPCC1840.04 |||caspase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 425
Score = 33.9 bits (74), Expect = 0.023
Identities = 27/97 (27%), Positives = 34/97 (35%), Gaps = 5/97 (5%)
Frame = +2
Query: 260 PNHGPEMRGPSNHGPEMRGPPNHGPEMRGPLNHGPEMRSP-PNHGPEMRSPPN---HGPE 427
PN+ P SN+ PP P P G + P N G S N + P
Sbjct: 22 PNYSPNNGSQSNNTVHQYQPPRMPPPSTRPQTDGNSNQIPMENVGHISLSSANSHAYAPP 81
Query: 428 MRGPPNHGPEMRGLPNH-GPDMRGPSNHGPEMRGPPN 535
PPN G G PN+ GP + + G N
Sbjct: 82 SGPPPNTGANSYGNPNYSGPQLPNTQTQSYNLAGGGN 118
Score = 30.7 bits (66), Expect = 0.21
Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 5/97 (5%)
Frame = +2
Query: 50 PHHGPEMRALPNHGPEMRGPPNHGPEMRGPLNHGPEMRGPLTH-GPEMRSPSN---HGPE 217
P++ P + N+ PP P P G + P+ + G S +N + P
Sbjct: 22 PNYSPNNGSQSNNTVHQYQPPRMPPPSTRPQTDGNSNQIPMENVGHISLSSANSHAYAPP 81
Query: 218 MRGPPNHGPEMRGLPNH-GPEMRGPSNHGPEMRGPPN 325
PPN G G PN+ GP++ + G N
Sbjct: 82 SGPPPNTGANSYGNPNYSGPQLPNTQTQSYNLAGGGN 118
Score = 29.1 bits (62), Expect = 0.65
Identities = 21/83 (25%), Positives = 29/83 (34%)
Frame = +2
Query: 320 PNHGPEMRGPLNHGPEMRSPPNHGPEMRSPPNHGPEMRGPPNHGPEMRGLPNHGPDMRGP 499
PN+ P N+ PP PP+ P+ G N P M + +
Sbjct: 22 PNYSPNNGSQSNNTVHQYQPPR-----MPPPSTRPQTDGNSNQIP-MENVGHISLSSANS 75
Query: 500 SNHGPEMRGPPNHGPEMRGPPNH 568
+ P PPN G G PN+
Sbjct: 76 HAYAPPSGPPPNTGANSYGNPNY 98
Score = 28.7 bits (61), Expect = 0.86
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 9/82 (10%)
Frame = +2
Query: 470 PNHGPDMRGPSNHGPEMRGPPNHGPEMRGPPNHRPEMRGPLNHGP-EMRGPLN------- 625
PN+ P+ SN+ PP PP+ RP+ G N P E G ++
Sbjct: 22 PNYSPNNGSQSNNTVHQYQPPR-----MPPPSTRPQTDGNSNQIPMENVGHISLSSANSH 76
Query: 626 -HGPEMRGPPNHGPEMRGPPNH 688
+ P PPN G G PN+
Sbjct: 77 AYAPPSGPPPNTGANSYGNPNY 98
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.9 bits (69), Expect = 0.092
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 9/126 (7%)
Frame = +2
Query: 152 PEMRGPLTHGPEMRSPSNHGPEMRGPPNHGPEMRGLPNHGP----EMRGPSNHGPEMRGP 319
P P T E+R P++ P PP +P+ P + P+ ++ P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Query: 320 PNHGPEMRGPLNHGPEMRSPP--NHGPEMRS---PPNHGPEMRGPPNHGPEMRGLPNHGP 484
P+ P + + P PP + P + P + P PN E PN GP
Sbjct: 185 PS-APSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAPNVTSESPKFPNRGP 243
Query: 485 DMRGPS 502
+ S
Sbjct: 244 SIPSAS 249
Score = 29.5 bits (63), Expect = 0.49
Identities = 27/127 (21%), Positives = 43/127 (33%), Gaps = 4/127 (3%)
Frame = +2
Query: 182 PEMRSPSNHGPEMRGPPNHGPEMRGLPNHGPEMRGPSNHGPEMRGPPNHGPEMRGPLNHG 361
P +P E+R PP P +P P P + PP + P
Sbjct: 125 PSAPAPPTPQSELR-PPTSAPPRPSIPPPSPASAPPI----PSKAPPIPS-SLPPPAQPA 178
Query: 362 PEMRSPPNHGPEMRSPPNHGPEMRGPPNHGPEMRGLPNHGPDMRGPSNHGPEMRGP---- 529
++SPP+ + P P++ PP + + P+ H P +
Sbjct: 179 APVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAPNVTSESPKF 238
Query: 530 PNHGPEM 550
PN GP +
Sbjct: 239 PNRGPSI 245
Score = 27.5 bits (58), Expect = 2.0
Identities = 23/107 (21%), Positives = 36/107 (33%), Gaps = 4/107 (3%)
Frame = +2
Query: 362 PEMRSPPNHGPEMRSPPNHGPEMRGPPNHGPEMRGLPNHGPDMRGPSNHGPEMRGPPNHG 541
P +PP E+R P + P PP +P+ P + + P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Query: 542 PEMRGPPNHRPEMRGPLNHGPEMRGPL---NHGPEMRGPP-NHGPEM 670
P P+ P M + P + P+ + P PP H P +
Sbjct: 185 PSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAPNV 231
>SPAC26A3.08 |smb1|smb|Sm snRNP core protein
Smb1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 147
Score = 31.1 bits (67), Expect = 0.16
Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 6/74 (8%)
Frame = +2
Query: 278 MRGPSNHGPEMRGPPNHGPEMRGPLNHGPEMRSPPNHG-PEMRSP-----PNHGPEMRGP 439
+RG ++GPP P MRG L GP + P G P ++P P G P
Sbjct: 70 LRGEFIVSLSVQGPPPMDPSMRGSLLSGPGVARPAGRGIPLGQAPVGLAGPVRGVGYTAP 129
Query: 440 PNHGPEMRGLPNHG 481
P RG P G
Sbjct: 130 PPPAGFGRGAPPPG 143
Score = 29.5 bits (63), Expect = 0.49
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Frame = +2
Query: 98 MRGPPNHGPEMRGPLNHGPEMRGPLTHG-PEMRSPSNHGPEMRG-----PPNHGPEMRGL 259
++GPP P MRG L GP + P G P ++P +RG PP RG
Sbjct: 80 VQGPPPMDPSMRGSLLSGPGVARPAGRGIPLGQAPVGLAGPVRGVGYTAPPPPAGFGRGA 139
Query: 260 PNHG 271
P G
Sbjct: 140 PPPG 143
Score = 28.7 bits (61), Expect = 0.86
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -1
Query: 594 LRGPLISGLWLGGPLISGPWLGGPLISGPWLEGPLMSGPWLGR 466
LRG I L + GP P + G L+SGP + P G LG+
Sbjct: 70 LRGEFIVSLSVQGPPPMDPSMRGSLLSGPGVARPAGRGIPLGQ 112
Score = 28.7 bits (61), Expect = 0.86
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 548 MRGPPNHRPEMRGPLNHGPEMRGPLNHG-PEMRGPPNHGPEMRG 676
++GPP P MRG L GP + P G P + P +RG
Sbjct: 80 VQGPPPMDPSMRGSLLSGPGVARPAGRGIPLGQAPVGLAGPVRG 123
Score = 28.3 bits (60), Expect = 1.1
Identities = 26/75 (34%), Positives = 31/75 (41%), Gaps = 7/75 (9%)
Frame = +2
Query: 488 MRGPSNHGPEMRGPPNHGPEMR-----GPPNHRPEMRG-PLNHGP-EMRGPLNHGPEMRG 646
+RG ++GPP P MR GP RP RG PL P + GP+ G
Sbjct: 70 LRGEFIVSLSVQGPPPMDPSMRGSLLSGPGVARPAGRGIPLGQAPVGLAGPV-RGVGYTA 128
Query: 647 PPNHGPEMRGPPNHG 691
PP RG P G
Sbjct: 129 PPPPAGFGRGAPPPG 143
Score = 28.3 bits (60), Expect = 1.1
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +2
Query: 218 MRGPPNHGPEMRGLPNHGPEMRGPSNHGPEMRGPPNHGPEMRGPLNHGPEMRSPPNHGPE 397
++GPP P MRG GP + P+ G + P + GP+ PP G
Sbjct: 80 VQGPPPMDPSMRGSLLSGPGVARPAGRGIPLGQAP---VGLAGPVRGVGYTAPPPPAGFG 136
Query: 398 MRSPP 412
+PP
Sbjct: 137 RGAPP 141
Score = 27.9 bits (59), Expect = 1.5
Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = -1
Query: 204 LEGLLISGP*VSGPLISGP*LRGPRISGPWLGGPRISGPWLGRARI--SGP*CG-GPRAS 34
L G I V GP P +RG +SGP + P G LG+A + +GP G G A
Sbjct: 70 LRGEFIVSLSVQGPPPMDPSMRGSLLSGPGVARPAGRGIPLGQAPVGLAGPVRGVGYTAP 129
Query: 33 GPRCG 19
P G
Sbjct: 130 PPPAG 134
Score = 27.1 bits (57), Expect = 2.6
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +2
Query: 428 MRGPPNHGPEMRGLPNHGPDMRGPSNHG-PEMRGPPNHGPEMRG 556
++GPP P MRG GP + P+ G P + P +RG
Sbjct: 80 VQGPPPMDPSMRGSLLSGPGVARPAGRGIPLGQAPVGLAGPVRG 123
Score = 26.2 bits (55), Expect = 4.6
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -1
Query: 318 GPLISGPWLEGPLISGPWLGRPLISGPWLG-GPL-ISGP 208
GP P + G L+SGP + RP G LG P+ ++GP
Sbjct: 82 GPPPMDPSMRGSLLSGPGVARPAGRGIPLGQAPVGLAGP 120
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.7 bits (66), Expect = 0.21
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 1/96 (1%)
Frame = +2
Query: 317 PPNHGPEMRGPLNHGPEMRSPPNHGPEMRSPPNHGPEMRGPPNHGPEMRGLPNHGPDMRG 496
PP P + P P PP++G + SPPN P P + P + P +
Sbjct: 241 PPERVPSLSAP---APPPIPPPSNGT-VSSPPNSPPRPIAPVSMNPAINSTSK--PPLPP 294
Query: 497 PSNHGPEMRGPPN-HGPEMRGPPNHRPEMRGPLNHG 601
PS+ N P PP+ R + P+ +G
Sbjct: 295 PSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNG 330
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.9 bits (64), Expect = 0.37
Identities = 20/82 (24%), Positives = 29/82 (35%)
Frame = +2
Query: 152 PEMRGPLTHGPEMRSPSNHGPEMRGPPNHGPEMRGLPNHGPEMRGPSNHGPEMRGPPNHG 331
P + P P PS++ P PP E + + P+ S PP +
Sbjct: 169 PSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYT 228
Query: 332 PEMRGPLNHGPEMRSPPNHGPE 397
P+ PL P PP P+
Sbjct: 229 PKQADPL-PAPPPPPPPTLPPQ 249
Score = 25.8 bits (54), Expect = 6.0
Identities = 23/107 (21%), Positives = 34/107 (31%)
Frame = +2
Query: 362 PEMRSPPNHGPEMRSPPNHGPEMRGPPNHGPEMRGLPNHGPDMRGPSNHGPEMRGPPNHG 541
P + P P P ++ P PP E + + PD S PP +
Sbjct: 169 PSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYT 228
Query: 542 PEMRGPPNHRPEMRGPLNHGPEMRGPLNHGPEMRGPPNHGPEMRGPP 682
P+ + P P P P+ R N G ++ PP
Sbjct: 229 PK-QADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPP 274
>SPAC13G7.04c |mac1||membrane anchored protein Mac1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 756
Score = 29.9 bits (64), Expect = 0.37
Identities = 50/198 (25%), Positives = 74/198 (37%), Gaps = 8/198 (4%)
Frame = +2
Query: 20 PHRGPEARGPPHHGPEMRALPNHGP---EMRGPPNHGPEMRGPLNHGPEMRGPLTHGPEM 190
P+ RG P + L HG MRGP N ++ L +GP
Sbjct: 561 PNMNNGHRGAPRNNSS-NDLHAHGGMPVNMRGPRNTSRN-NSSSEFNAQIPMNLRNGPRN 618
Query: 191 RSPSNHGPEMRGPPNHGPEMRGLPNHGPEMRGPSNHGPEMRGPP--NHGPEMRGPLNHGP 364
S SN ++ G RG+P P R S M G P N+ + + P ++G
Sbjct: 619 ASRSNSSTDLFGQSGIPGNSRGMPT-SPNSRNNSALDLSMHGIPLANNSRQFKRP-SYGN 676
Query: 365 EMRSPPNHGPEMRSPPNHGP--EMRGPPNHGP-EMRGLPNHGPDMRGPSNHGPEMRGPPN 535
R P+ P+HG +GP M P + ++ SN ++ G +
Sbjct: 677 MSR--PSFELNGSRNPSHGSLNTAHAGMGYGPRSMMRDPQNLSNVPPVSNTLDQLSGNAD 734
Query: 536 HGPEMRGPPNHRPEMRGP 589
+RG N+R RGP
Sbjct: 735 FELPVRGNRNNR---RGP 749
>SPCC576.11 |rpl15||60S ribosomal protein L15|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 201
Score = 27.1 bits (57), Expect = 2.6
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = -3
Query: 577 FRPMVRRTSHFRPMVRGASHFRPMVRGTSHVR 482
+R VRR RP+ +G ++ +P+ +G +H++
Sbjct: 62 YRIRVRRGGRKRPVPKGQTYGKPVHQGVNHLK 93
>SPAC1783.08c |rpl1502|rpl15-2|60S ribosomal protein
L15b|Schizosaccharomyces pombe|chr 1|||Manual
Length = 201
Score = 27.1 bits (57), Expect = 2.6
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = -3
Query: 577 FRPMVRRTSHFRPMVRGASHFRPMVRGTSHVR 482
+R VRR RP+ +G ++ +P+ +G +H++
Sbjct: 62 YRIRVRRGGRKRPVPKGQTYGKPVHQGVNHLK 93
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 26.6 bits (56), Expect = 3.5
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -3
Query: 613 PHFGTMIKGTSHFRPMVRRTSHFRPMVRGASHFRPMVRGTSHVRPV 476
PH ++G + + +R + P GAS P GTS PV
Sbjct: 255 PHDPPDLEGDDNIPDLPKRPASIAPQPTGASTIAPQPTGTSPSPPV 300
>SPBC21B10.03c |||ataxin-2 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 791
Score = 26.2 bits (55), Expect = 4.6
Identities = 28/99 (28%), Positives = 34/99 (34%), Gaps = 4/99 (4%)
Frame = +2
Query: 257 LPNHGPEMRGPSNHGPEMRGPPNHGPEMRGPLNHGPEM--RSPPNHGPEMRSPPNHGPEM 430
+P + P MR PS H + PN P G M P P + P P
Sbjct: 604 VPGYTPYMRNPSQH-TSVAPSPNGTPTSGNSSTVGSPMIGYMAPQFIPPY-AMPQFPPSG 661
Query: 431 RGPPNHGPEMRGLPNHGPDMRGPSNHGPEMRG--PPNHG 541
G P +P G M N P M G PN+G
Sbjct: 662 NGRGASAPATYFVPQMGGMMAYTMNGVPPMYGQYAPNNG 700
>SPBC19G7.16 |iws1||transcription elongation factor complex subunit
Iws1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 428
Score = 25.4 bits (53), Expect = 8.0
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -3
Query: 574 RPMVRRTSHFRPMVRGASHFRPMVRGTSHVRPVVRETSH 458
RP+++R++++R G + F P V T R + S+
Sbjct: 315 RPIIKRSANYRDRAVGVASFNPEVFQTRRRRDLAAAESN 353
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,176,344
Number of Sequences: 5004
Number of extensions: 81944
Number of successful extensions: 236
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 210
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 327172622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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