Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0157
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    23   2.0  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   6.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   8.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   8.0  

>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = -3

Query: 553 GDFVDPLGLCGVFGPSFILLGTGLYC*VN--VGDPG-LEPTSLDLGVLGDLGPK 401
           GDFV   G   ++GP +++    +   +N  +G  G L    + LGV G+ G K
Sbjct: 83  GDFVTGSGTSEMYGPDYLMSENVVLVTINYRLGMLGFLSFEDVSLGVPGNAGLK 136


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 336 PGNMSGAHSDINSPENSMPGSP 401
           PG  S +   I+SP ++  GSP
Sbjct: 62  PGRKSPSSPRISSPSSTKSGSP 83


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +3

Query: 318 HRGASSPGNMSGAHSDINSPENS-MPGSPLGPKSPSTPKSS 437
           ++  SSPG +SG  S + SP    +P       SPS   +S
Sbjct: 678 NQSISSPGALSGL-SSLTSPGGMVLPSPSTSVASPSVSVAS 717


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +3

Query: 318 HRGASSPGNMSGAHSDINSPENS-MPGSPLGPKSPSTPKSS 437
           ++  SSPG +SG  S + SP    +P       SPS   +S
Sbjct: 570 NQSISSPGALSGL-SSLTSPGGMVLPSPSTSVASPSVSVAS 609


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,484
Number of Sequences: 336
Number of extensions: 2389
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)