Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0157
(750 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0965 - 22996575-22999112,22999202-22999636,22999717-229998... 34 0.14
06_03_0344 - 19754868-19754980,19756085-19756162,19756241-19756619 34 0.14
05_03_0458 + 14280953-14281866,14281964-14282912 31 0.74
10_07_0061 + 12489552-12489674,12490761-12490836,12490916-124909... 29 3.0
09_04_0695 - 19547101-19548010,19548089-19548587,19549461-195497... 29 3.0
03_02_0950 + 12661008-12662312,12662403-12662576 29 3.9
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597... 29 3.9
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 29 3.9
11_07_0003 - 27182551-27183054 29 5.2
09_02_0278 + 6691685-6692188 29 5.2
08_01_1000 + 10154024-10154147,10155500-10155761,10155839-101558... 29 5.2
07_01_0017 - 114497-114547,114700-114816,114917-114997,115312-11... 29 5.2
05_03_0098 + 8375038-8375063,8375351-8377049,8377159-8377737 29 5.2
03_06_0662 + 35377974-35378270,35378354-35378623,35378795-353789... 29 5.2
10_02_0137 - 5730778-5730873,5732137-5732334,5732413-5732625,573... 28 6.9
07_01_0282 - 2070027-2070041,2074763-2075062,2075154-2075722,207... 28 6.9
07_01_0183 + 1297445-1297796,1297896-1298424,1298548-1298630,129... 28 6.9
04_04_1184 + 31558678-31558707,31559485-31559644,31559732-315603... 28 6.9
04_03_1002 - 21617339-21617362,21618476-21618565,21618755-216194... 28 6.9
02_05_0767 + 31609773-31610174,31610409-31610501,31610608-316106... 28 9.1
>07_03_0965 - 22996575-22999112,22999202-22999636,22999717-22999801,
22999888-22999957,23000050-23000293,23000396-23000482,
23000655-23000706,23000830-23001226,23001324-23001648,
23001748-23001914,23002007-23002547
Length = 1646
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +3
Query: 309 SNQHRGASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSP 488
S Q + A +P + SGA S + +SMP + + P+ P S+ GS S QQ P
Sbjct: 1422 SPQQQSAKNPASTSGAKSAPTNHYSSMPMPSILGQQPNVPPGSNSGSKQQSHMMKQQPFP 1481
>06_03_0344 - 19754868-19754980,19756085-19756162,19756241-19756619
Length = 189
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +3
Query: 321 RGASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPNS 500
R S+PG+ HSD++ P+NS G P S P S P + + + +P P S
Sbjct: 51 RDTSTPGSRPVDHSDLSPPKNSSSGDRDTPTPGSRPVDRSDLSPPENSSSGDRDTPTPGS 110
Score = 32.7 bits (71), Expect = 0.32
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 14/70 (20%)
Frame = +3
Query: 333 SPGNMSGAHSDINSPENSMPGS---------PLGPKSPSTPKSSDVG----SNPGS-PTF 470
+PG+ HSD++ P+NS PG P+ S PK+S +G S PGS P
Sbjct: 3 TPGSRPVDHSDLSPPKNSPPGDRDTPTPGSRPVDRSDLSPPKNSSLGDRDTSTPGSRPVD 62
Query: 471 TQQYSPVPNS 500
SP NS
Sbjct: 63 HSDLSPPKNS 72
Score = 31.5 bits (68), Expect = 0.74
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = +3
Query: 306 TSNQHRGASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYS 485
+S+ R +PG+ SD++ PENS G P S P S P + + + +
Sbjct: 72 SSSGDRDTPTPGSRPVDRSDLSPPENSSSGDRDTPTPGSQPVDRSDLSPPQNSSSGDRDT 131
Query: 486 PVPNS 500
P P S
Sbjct: 132 PTPGS 136
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 31.5 bits (68), Expect = 0.74
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +3
Query: 321 RGASSPGNMSGAHS--DINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVP 494
R +SSP S + S + P + +P P S STP SS + P S T T S P
Sbjct: 3 RISSSPATASASSSYGPTSPPSSCRNAAPSPPSSNSTPTSSTTPTVPPSLTTTSSPSSSP 62
Query: 495 NS 500
+S
Sbjct: 63 SS 64
>10_07_0061 +
12489552-12489674,12490761-12490836,12490916-12490980,
12491089-12491166,12492156-12492236,12492813-12492974,
12493328-12493426,12493509-12494797,12495063-12495286,
12495373-12495500,12495596-12495634,12495724-12497178
Length = 1272
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 321 RGASSPGNMSGAHSDINSPENSM 389
RGA +P N +G +S I+SP+N M
Sbjct: 325 RGAGTPMNYAGINSSISSPQNLM 347
>09_04_0695 -
19547101-19548010,19548089-19548587,19549461-19549728,
19551025-19551687,19551849-19552060,19552203-19552593,
19552659-19553107,19553454-19553790
Length = 1242
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSP-STPKSSDVGSNPGS 461
S P H D+NSP P +P G SP +T GS+ GS
Sbjct: 9 SPPATGHSGHGDLNSPP---PAAPAGASSPAATSAQCSSGSSSGS 50
>03_02_0950 + 12661008-12662312,12662403-12662576
Length = 492
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +3
Query: 327 ASSPGNMSGA-HSDINSPENSMPGSPLGPKSPSTPKSSDVGSNP-GSP 464
A++PG S S + S P +PL +P T K ++ NP GSP
Sbjct: 118 ANNPGLFSDLLGSALGSSSRGQPNAPLRSSAPQTYKPANANPNPSGSP 165
>03_02_0155 -
5974118-5974173,5974242-5974314,5974393-5974500,
5975189-5976914,5977065-5977620,5978008-5978485
Length = 998
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 372 SPENSMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
+PEN++P S P SP P S P SPT
Sbjct: 80 APENALPPSSPPPPSPPPPPPSSPPPVPPSPT 111
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = +3
Query: 333 SPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPN 497
+P + + S SP G P TP S GS+P +P Y+P P+
Sbjct: 230 TPSDAPPSPSSDTSPTTPGGGGGYTPTPSDTPPSPSSGSSPTTPGGGGGYTPTPS 284
>11_07_0003 - 27182551-27183054
Length = 167
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +3
Query: 306 TSNQHRGASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGS 461
+S G SS + G+ S + + GSP G +SP+T ++ G G+
Sbjct: 48 SSGSSSGGSSTRSPVGSASPSSGRNPATTGSPGGVRSPATARAGSPGGGTGT 99
>09_02_0278 + 6691685-6692188
Length = 167
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +3
Query: 306 TSNQHRGASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGS 461
+S G SS + G+ S + + GSP G +SP+T ++ G G+
Sbjct: 48 SSGSSSGGSSTRSPVGSASPSSGRNPATTGSPGGVRSPATARAGSPGGGTGT 99
>08_01_1000 +
10154024-10154147,10155500-10155761,10155839-10155885,
10155967-10155998,10156079-10156146,10156214-10156605,
10156811-10157009,10157494-10157636,10157722-10158366,
10158493-10158551,10158725-10158823
Length = 689
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Frame = +3
Query: 333 SPGNMSGA-HSDIN--SPENS--MPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVP 494
SP N S IN SP N+ P L PKSP +S P P F+ Q P P
Sbjct: 504 SPVNAEAQPESQINPQSPRNADGQPEPELNPKSPGEAGTSHFDDMPEIPRFSPQNIPSP 562
>07_01_0017 -
114497-114547,114700-114816,114917-114997,115312-115371,
116029-116238,116412-116720,116790-117080
Length = 372
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 463 LHSLNSTVLFPI--V*MKDQRLHKVL-VGPQSLLLVPQILDLDQHHQIHSHNLQLLQ 624
LH L+ ++ + + D +H V +GP + + LD HH SH+LQL+Q
Sbjct: 244 LHVLHGIIVLCVSAIGCPDAFIHSVQEIGPLKI----ERLDFSDHHSFSSHDLQLIQ 296
>05_03_0098 + 8375038-8375063,8375351-8377049,8377159-8377737
Length = 767
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 336 PGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDV 443
PG D+++ E S P GPK P PK+ ++
Sbjct: 591 PGAGESNSFDVHNDEESKPPKQSGPKKPWVPKNDEL 626
>03_06_0662 +
35377974-35378270,35378354-35378623,35378795-35378973,
35380073-35380116,35380295-35380384,35380472-35380588,
35380679-35380803,35380883-35381155,35381253-35381386,
35381518-35381604,35381714-35381831
Length = 577
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 583 QHHQIHSHNLQLLQVNDSQDHRRPVLLQIAIHLP 684
QH+ +H +N+ L+ VND H RP +++ P
Sbjct: 390 QHYSLH-YNVALVSVNDMDFHARPANMKLDNECP 422
>10_02_0137 -
5730778-5730873,5732137-5732334,5732413-5732625,
5732748-5732870,5733726-5733841,5734530-5734897,
5735498-5735649,5736557-5736715,5737773-5737946
Length = 532
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +3
Query: 324 GASSPGNMSGAHSDINSPENSMPGSP-LGPKSPSTPKSSDVGSNPGSPT 467
G ++ N S A D + SP L PK PK V ++P PT
Sbjct: 346 GKAAGLNESDADEDDEDDDQEDESSPVLAPKQKDQPKDEPVDNSPAKPT 394
>07_01_0282 -
2070027-2070041,2074763-2075062,2075154-2075722,
2075812-2076337
Length = 469
Score = 28.3 bits (60), Expect = 6.9
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +3
Query: 315 QHRGASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
Q + + +P S A + ++ P P P SPS S+ + PG+PT
Sbjct: 402 QQQRSMTPSASSRAAAATDADGEDPPPPPPHPPSPSAEGSASPPTTPGTPT 452
>07_01_0183 +
1297445-1297796,1297896-1298424,1298548-1298630,
1298901-1298989,1299091-1299164,1300196-1300246,
1300439-1300515,1302199-1302863
Length = 639
Score = 28.3 bits (60), Expect = 6.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 577 LDQHHQIHSHNLQLLQVNDSQDHRR 651
+D+HH +H H Q Q Q H++
Sbjct: 32 MDEHHHVHHHQQQQQQQQQQQHHQQ 56
>04_04_1184 +
31558678-31558707,31559485-31559644,31559732-31560394,
31560512-31560956,31561090-31561171,31561319-31561534
Length = 531
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNP 455
S G G+ + SP S+P +P+G +S ++P + P
Sbjct: 310 SRTGTPLGSMTPTRSPNCSIPSTPVGGRSTASPGDDNTDDGP 351
>04_03_1002 -
21617339-21617362,21618476-21618565,21618755-21619432,
21619536-21619772,21619849-21619896,21619995-21620045,
21620301-21620426,21620557-21620697,21621165-21621401,
21622467-21622571,21622812-21622982,21623306-21623380,
21623754-21623936,21624151-21624297,21624365-21624472,
21624605-21624709,21625109-21625213,21625322-21625381,
21625512-21625579,21625876-21625954,21626208-21626267,
21626445-21626498,21626834-21626886,21627405-21627494,
21628265-21628362,21628464-21628852
Length = 1193
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 384 SMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPNS 500
S S G P+TP SS G P +P+ S P+S
Sbjct: 50 SSSSSAAGGGRPTTPSSSSAGGRPTTPSAAFARSTTPSS 88
>02_05_0767 +
31609773-31610174,31610409-31610501,31610608-31610668,
31610797-31610865,31611274-31611440
Length = 263
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 354 AHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYS-PVPNS 500
A + I SP + PG PL + S SS S+P S + + +S PV S
Sbjct: 14 ASNPIPSPPVAKPGRPLTVAACSNSSSSSSSSSPSSTSCSAAWSLPVATS 63
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,320,323
Number of Sequences: 37544
Number of extensions: 290408
Number of successful extensions: 925
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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