Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0157
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       33   0.009
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    28   0.27 
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    27   0.62 
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    27   0.82 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   1.4  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           25   2.5  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    25   2.5  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   3.3  
CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal pe...    24   5.8  

>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 33.1 bits (72), Expect = 0.009
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +1

Query: 556 LVPQILDLDQHHQIHSHNLQLLQVNDSQDHRRPVLLQIA 672
           L P + DL+  H  H H  Q+  +  SQD R P+ L+IA
Sbjct: 531 LTPSVNDLN--HPFHLHGYQMFVMEMSQDRRVPITLEIA 567


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 28.3 bits (60), Expect = 0.27
 Identities = 29/69 (42%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
 Frame = -3

Query: 592 GDAGRDLVSGEPVGDFVDPLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPTSLDL-GVLG 416
           GD G  +V   P G    P G  G+ GP     G G     + GDPGL P SL   G  G
Sbjct: 96  GDPGLSMVG--PPG----PKGNPGLRGPKGERGGMG-----DRGDPGL-PGSLGYPGEKG 143

Query: 415 DLGPKGDPG 389
           DLG  G PG
Sbjct: 144 DLGTPGPPG 152



 Score = 27.5 bits (58), Expect = 0.47
 Identities = 22/58 (37%), Positives = 27/58 (46%)
 Frame = -3

Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGD 290
           G+PGL       G  G +G +GDPG+  S     E   L  PG   P    DVG KG+
Sbjct: 110 GNPGLRGPK---GERGGMGDRGDPGLPGSLGYPGEKGDLGTPG--PPGYPGDVGPKGE 162



 Score = 25.8 bits (54), Expect = 1.4
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -3

Query: 427 GVLGDLGPKGDPG 389
           G  GD+GPKG+PG
Sbjct: 152 GYPGDVGPKGEPG 164



 Score = 25.8 bits (54), Expect = 1.4
 Identities = 13/25 (52%), Positives = 14/25 (56%)
 Frame = -3

Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPG 389
           G PGL     D+GV G  G KGD G
Sbjct: 367 GLPGLNGVKGDMGVPGFPGVKGDKG 391



 Score = 25.4 bits (53), Expect = 1.9
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGI 386
           G PGL       G+ G  GPKGD G+
Sbjct: 320 GVPGLRGNDGIPGLEGPSGPKGDAGV 345



 Score = 25.4 bits (53), Expect = 1.9
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = -3

Query: 532 GLCGVFGPSFILLGTGLYC*VNVGDPGLEPTSLDLGVLGDLGPKGDPG 389
           GL G+ GP+ I    G      +G  G E      G+ GD+GP+G PG
Sbjct: 731 GLPGLAGPAGIPGAPGAPG--EMGLRGFEGARGLQGLRGDVGPEGRPG 776



 Score = 25.0 bits (52), Expect = 2.5
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3

Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSG 374
           G PG +      G+ G  G KGDPG+   G
Sbjct: 75  GAPGRDGMPGAPGLPGSKGVKGDPGLSMVG 104



 Score = 25.0 bits (52), Expect = 2.5
 Identities = 26/82 (31%), Positives = 32/82 (39%), Gaps = 2/82 (2%)
 Frame = -3

Query: 457 PGLEPTSLDLGVLGDLGPKGDPG-IEFSGELISE*APLMFPGELAPRC*LDVGCKGDCD* 281
           PG+     D G  G  GP G+PG     G+      P +   +  P      G KGD   
Sbjct: 286 PGMSGEKGDKGYTGPEGPPGEPGAASEKGQNGEPGVPGLRGNDGIPGLEGPSGPKGDAG- 344

Query: 280 LSGEGECGPH-EPPDRGE*GGN 218
           + G G  GP  E  D G  G N
Sbjct: 345 VPGYGRPGPQGEKGDIGLTGVN 366



 Score = 25.0 bits (52), Expect = 2.5
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -3

Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPG 389
           G PG +    D G  G +GPKGD G
Sbjct: 621 GLPGPQGEKGDQGPPGFIGPKGDKG 645



 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 466 VGDPGLEPTSLDLGVLGDLGPKGDPG 389
           +G PG++      GV G+ G KGD G
Sbjct: 226 MGAPGIQGVRGPQGVKGEPGEKGDRG 251



 Score = 24.6 bits (51), Expect = 3.3
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGI 386
           G+PG +    ++GV G +G  G PG+
Sbjct: 242 GEPGEKGDRGEIGVKGLMGQSGPPGM 267



 Score = 24.2 bits (50), Expect = 4.4
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGI 386
           GDPGL        ++G  GPKG+PG+
Sbjct: 96  GDPGLS-------MVGPPGPKGNPGL 114



 Score = 24.2 bits (50), Expect = 4.4
 Identities = 28/71 (39%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
 Frame = -3

Query: 598 ESGDAGRDLVSGEPVGDFVDPLGLCGVFGPSFILLGTGLYC*VNV-GDPGLEPTSLDLGV 422
           E GD G     G P GD V P G  G  GP+      G      V G PGL+      GV
Sbjct: 141 EKGDLGTPGPPGYP-GD-VGPKGEPGPKGPAGHPGAPGRPGVDGVKGLPGLKGDIGAPGV 198

Query: 421 LGDLGPKGDPG 389
           +G  G KGD G
Sbjct: 199 IGLPGQKGDMG 209



 Score = 24.2 bits (50), Expect = 4.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGI 386
           G PGLE  +   G++G+ G +G PG+
Sbjct: 666 GMPGLEGVAGLPGMVGEKGDRGLPGM 691



 Score = 23.4 bits (48), Expect = 7.6
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -3

Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPG 389
           G PG      D G+ G  GP G PG
Sbjct: 719 GPPGFNGPKGDKGLPGLAGPAGIPG 743


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 27.1 bits (57), Expect = 0.62
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -3

Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGI 386
           G PG+       G+ G+ GPKG+PG+
Sbjct: 613 GYPGMPGEDGTPGLRGEPGPKGEPGL 638



 Score = 24.6 bits (51), Expect = 3.3
 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
 Frame = -3

Query: 463 GDPGL--EPTSL-DLGVLGDLGPKGDPG 389
           G PGL  EP    + G+LG  GP G+PG
Sbjct: 622 GTPGLRGEPGPKGEPGLLGPPGPSGEPG 649



 Score = 23.4 bits (48), Expect = 7.6
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPG 389
           G+PG +      G  G++GP+G PG
Sbjct: 229 GEPGNDGLEGLPGPQGEVGPRGFPG 253



 Score = 23.4 bits (48), Expect = 7.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 427 GVLGDLGPKGDPG 389
           G+ G  GPKG+PG
Sbjct: 374 GLKGQSGPKGEPG 386


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 26.6 bits (56), Expect = 0.82
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +3

Query: 366 INSPENSMPGSPLGPKSPS-TPKSSDVGSNPGSPTFTQQYSPVPN 497
           ++  + S PG+P G  SP  TP+ + V S P      Q Y   PN
Sbjct: 165 VSGSDMSSPGAPTGSSSPQITPRPTPVKS-PYEWMKKQSYQSQPN 208


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
 Frame = +3

Query: 336 PGNMSGAHSDINSPENS--MPGSPLGPKSPSTPKSSDVGSNPGSP 464
           P  M G    I SP+NS    G P G   P  P     G  PG P
Sbjct: 269 PNPMGGPRPQI-SPQNSNLSGGMPSGMVGPPRPPMPMQGGAPGGP 312


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
 Frame = +3

Query: 306 TSNQHRGASSPGNMS----GAHSDINSPENSMPG---SPLGPKSPSTPKSSDVGSNPGSP 464
           TS+ +    SP N        HS +NS  NS  G         S S+  SS   S+  S 
Sbjct: 68  TSSPYHAPPSPANSHYEPMECHSAVNSSSNSSTGYLHQHQQSSSSSSSSSSSSMSSSSSS 127

Query: 465 TFTQQYSPV 491
           +F+   SP+
Sbjct: 128 SFSSPDSPL 136


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +3

Query: 318 HRGASSPGNMSGAHSDINSPENSMPGSP 401
           +RG SSP + SGA S I + +N     P
Sbjct: 833 NRGPSSPSSTSGAASPIQTVKNDSLEEP 860


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
 Frame = +1

Query: 544 QSLLLVPQILDLDQHHQIHSHNLQ-LLQVNDSQDHRRPVLLQIA 672
           Q LL   Q     QHHQ H H  Q   Q + +  H  P L+  A
Sbjct: 635 QHLLQQQQQQQQHQHHQAHQHQGQHHAQHHSNGTHHGPSLMSSA 678



 Score = 23.8 bits (49), Expect = 5.8
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 306 TSNQHRGASSPGNMSGAHSDINSPENSMPGSPL 404
           +SNQ R A SP    G+   + SP+N++  S +
Sbjct: 795 SSNQSRVAISPLYCEGSVPTLQSPKNAVAPSDI 827


>CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal
           peptidase protein.
          Length = 247

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 7/16 (43%), Positives = 14/16 (87%)
 Frame = -1

Query: 270 KENVDHMNHQIEESEA 223
           +E VD+++H +EE++A
Sbjct: 146 REKVDYVSHSVEEAQA 161


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 633,838
Number of Sequences: 2352
Number of extensions: 10669
Number of successful extensions: 52
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)