Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0157
(750 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52773-1|CAA36982.1| 462|Homo sapiens protein ( Human mRNA for ... 42 0.003
DQ303444-1|ABB96254.1| 452|Homo sapiens retinoid X receptor, al... 42 0.003
BC110998-1|AAI10999.1| 462|Homo sapiens retinoid X receptor, al... 42 0.003
BC063827-1|AAH63827.1| 516|Homo sapiens RXRA protein protein. 42 0.003
AL669970-1|CAM45733.1| 462|Homo sapiens retinoid X receptor, al... 42 0.003
AL354796-1|CAH70571.1| 462|Homo sapiens retinoid X receptor, al... 42 0.003
AJ890451-1|CAI67595.1| 1125|Homo sapiens collagen, type XXVIII p... 36 0.12
X05561-1|CAA29075.1| 944|Homo sapiens protein ( Human mRNA for ... 36 0.16
M26576-1|AAA53098.1| 1669|Homo sapiens alpha-1 type IV collagen ... 36 0.16
BC151220-1|AAI51221.1| 1669|Homo sapiens COL4A1 protein protein. 36 0.16
BC047305-1|AAH47305.1| 1075|Homo sapiens COL4A1 protein protein. 36 0.16
AL390755-2|CAM20295.1| 1318|Homo sapiens collagen type IV alpha ... 36 0.16
AL390755-1|CAH74130.1| 1669|Homo sapiens collagen type IV alpha ... 36 0.16
AL161773-2|CAM14222.1| 1318|Homo sapiens collagen type IV alpha ... 36 0.16
AL161773-1|CAH71365.1| 1669|Homo sapiens collagen type IV alpha ... 36 0.16
AK090416-1|BAC03397.1| 127|Homo sapiens FLJ00318 protein protein. 36 0.16
AB209646-1|BAD92883.1| 847|Homo sapiens COL4A1 protein variant ... 36 0.16
Y00706-1|CAA68698.1| 1212|Homo sapiens protein ( Human mRNA for ... 36 0.21
Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV ... 34 0.47
X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4 ... 34 0.47
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 34 0.47
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 34 0.47
M63730-1|AAA51839.1| 349|Homo sapiens BPAG2 protein. 34 0.47
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 34 0.47
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 34 0.47
AC079235-1|AAY14670.1| 1324|Homo sapiens unknown protein. 34 0.47
BC042075-1|AAH42075.1| 854|Homo sapiens COL22A1 protein protein. 33 0.83
AF406780-1|AAN03620.1| 1626|Homo sapiens alpha 1 type XXII colla... 33 0.83
Z74616-1|CAA98969.1| 1366|Homo sapiens prepro-alpha2(I) collagen... 33 1.1
X55525-1|CAA39142.1| 397|Homo sapiens type I collagen protein. 33 1.1
V00503-1|CAA23761.1| 740|Homo sapiens protein ( Human mRNA enco... 33 1.1
J03464-1|AAB59374.1| 1366|Homo sapiens COL1A2 protein. 33 1.1
BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein. 33 1.1
BC054498-1|AAH54498.1| 1366|Homo sapiens collagen, type I, alpha... 33 1.1
BC042586-1|AAH42586.1| 1366|Homo sapiens collagen, type I, alpha... 33 1.1
AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens ... 33 1.1
AF144235-1|AAD33923.1| 154|Homo sapiens hypothetical protein SB... 33 1.1
AF004877-1|AAB93981.1| 1366|Homo sapiens pro-alpha 2(I) collagen... 33 1.1
AC002528-1|AAB69977.1| 1186|Homo sapiens alpha2(I) collagen prot... 33 1.1
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 33 1.4
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein. 33 1.4
CR456360-1|CAG30246.1| 473|Homo sapiens Em:AC007663.1 protein. 32 1.9
BC117170-1|AAI17171.1| 1714|Homo sapiens collagen, type XXIV, al... 32 1.9
BC113654-1|AAI13655.1| 1714|Homo sapiens collagen, type XXIV, al... 32 1.9
BC011787-1|AAH11787.1| 473|Homo sapiens reticulon 4 receptor pr... 32 1.9
AY358297-1|AAQ88664.1| 473|Homo sapiens NOGOR protein. 32 1.9
AY244357-1|AAP80185.1| 1714|Homo sapiens alpha 1 type XXIV colla... 32 1.9
AL445427-1|CAI19120.1| 1714|Homo sapiens collagen, type XXIV, al... 32 1.9
AL359971-1|CAI16233.1| 1714|Homo sapiens collagen, type XXIV, al... 32 1.9
AL356059-1|CAH71121.1| 1714|Homo sapiens collagen, type XXIV, al... 32 1.9
AF283463-1|AAG53612.1| 473|Homo sapiens Nogo receptor protein. 32 1.9
U47004-2|AAB19039.1| 1690|Homo sapiens collagen type IV a6 chain... 32 2.5
U47004-1|AAB19038.1| 1691|Homo sapiens collagen type IV a6 chain... 32 2.5
S57132-1|AAB25797.1| 1186|Homo sapiens type XVI collagen alpha 1... 32 2.5
M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collag... 32 2.5
BC008760-1|AAH08760.3| 591|Homo sapiens COL5A1 protein protein. 32 2.5
AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1... 32 2.5
AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1... 32 2.5
AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1... 32 2.5
AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V coll... 32 2.5
AB209571-1|BAD92808.1| 1463|Homo sapiens alpha 1 type XVI collag... 32 2.5
J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein. 31 3.3
D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain... 31 3.3
BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein. 31 3.3
AM260536-1|CAJ97431.1| 1266|Homo sapiens ponsin protein. 31 3.3
AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha ... 31 3.3
AL158165-7|CAI14379.1| 1292|Homo sapiens sorbin and SH3 domain c... 31 3.3
AL158165-5|CAI14381.1| 1151|Homo sapiens sorbin and SH3 domain c... 31 3.3
AF356526-1|AAK37564.1| 1151|Homo sapiens sorbin and SH3 domain c... 31 3.3
AF356525-1|AAK37563.1| 1292|Homo sapiens sorbin and SH3 domain c... 31 3.3
AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-... 31 3.3
AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-... 31 3.3
AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-... 31 3.3
L12347-1|AAA36358.1| 718|Homo sapiens collagen protein. 31 4.4
BC116180-1|AAI16181.1| 846|Homo sapiens COL24A1 protein protein. 31 4.4
BC113364-1|AAI13365.1| 1142|Homo sapiens collagen, type XIX, alp... 31 4.4
BC113362-1|AAI13363.1| 1142|Homo sapiens collagen, type XIX, alp... 31 4.4
AL359539-1|CAI16492.1| 1142|Homo sapiens collagen type XIX alpha... 31 4.4
AL160262-5|CAI42322.1| 1142|Homo sapiens collagen type XIX alpha... 31 4.4
AL136445-2|CAI42716.1| 1142|Homo sapiens collagen type XIX alpha... 31 4.4
AL133388-3|CAI42497.1| 1142|Homo sapiens collagen type XIX alpha... 31 4.4
AL118519-1|CAB99331.2| 1142|Homo sapiens collagen type XIX alpha... 31 4.4
AF217500-1|AAL56647.1| 2072|Homo sapiens histone acetyltransfera... 31 4.4
AF119231-1|AAF00100.1| 2073|Homo sapiens histone acetyltransfera... 31 4.4
AB004629-1|BAA23309.1| 1143|Homo sapiens Type XIX collagen a1 ch... 31 4.4
X54412-1|CAA38276.1| 931|Homo sapiens protein ( Human mRNA for ... 31 5.8
M65158-1|AAA96439.1| 625|Homo sapiens type VII collagen protein. 31 5.8
L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein. 31 5.8
L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen... 31 5.8
BC063646-1|AAH63646.1| 678|Homo sapiens collagen, type IX, alph... 31 5.8
AL160262-4|CAI42321.1| 921|Homo sapiens collagen type IX alpha ... 31 5.8
AL160262-3|CAI42320.1| 448|Homo sapiens collagen type IX alpha ... 31 5.8
AL160262-2|CAO03366.1| 227|Homo sapiens collagen type IX alpha ... 31 5.8
AL080275-3|CAI19590.1| 921|Homo sapiens collagen type IX alpha ... 31 5.8
AL080275-2|CAI19589.1| 448|Homo sapiens collagen type IX alpha ... 31 5.8
AL080275-1|CAO03651.1| 227|Homo sapiens collagen type IX alpha ... 31 5.8
AF036130-2|AAC33528.1| 678|Homo sapiens collagen type IX alpha ... 31 5.8
AF036130-1|AAC33527.1| 921|Homo sapiens collagen type IX alpha ... 31 5.8
X52022-1|CAA36267.1| 3176|Homo sapiens collagen type VI, alpha 3... 30 7.7
M95610-1|AAA80977.1| 675|Homo sapiens alpha-2 IX collagen protein. 30 7.7
M69008-1|AAA52754.1| 623|Homo sapiens alpha-1 type XIII collage... 30 7.7
M59217-1|AAA51685.1| 584|Homo sapiens alpha-1 type XIII collage... 30 7.7
BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alph... 30 7.7
BC117226-1|AAI17227.1| 345|Homo sapiens forkhead box L1 protein. 30 7.7
BC115363-1|AAI15364.1| 799|Homo sapiens ARHGAP12 protein protein. 30 7.7
BC115362-1|AAI15363.1| 799|Homo sapiens ARHGAP12 protein protein. 30 7.7
BC100027-1|AAI00028.1| 345|Homo sapiens forkhead box L1 protein. 30 7.7
BC033174-1|AAH33174.1| 979|Homo sapiens Similar to collagen, ty... 30 7.7
AY033595-1|AAK52312.1| 846|Homo sapiens rho-GAP domain containi... 30 7.7
AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alph... 30 7.7
AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alph... 30 7.7
AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alp... 30 7.7
AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha ... 30 7.7
AL390715-4|CAI12372.1| 846|Homo sapiens Rho GTPase activating p... 30 7.7
AL138925-3|CAI15452.1| 683|Homo sapiens collagen type XIII alph... 30 7.7
AL138925-2|CAI15451.2| 695|Homo sapiens collagen type XIII alph... 30 7.7
AL138925-1|CAI15450.1| 717|Homo sapiens collagen type XIII alph... 30 7.7
AL050341-7|CAI20433.1| 83|Homo sapiens collagen type IX alpha ... 30 7.7
AL050341-6|CAB81611.1| 689|Homo sapiens collagen type IX alpha ... 30 7.7
AL050341-5|CAI20432.1| 225|Homo sapiens collagen type IX alpha ... 30 7.7
AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha... 30 7.7
AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha... 30 7.7
AJ293624-1|CAC00688.1| 717|Homo sapiens type XIII collagen prot... 30 7.7
AF315075-1|AAG40312.1| 345|Homo sapiens forkhead family transcr... 30 7.7
AF177941-1|AAF59902.1| 1745|Homo sapiens collagen type V alpha 3... 30 7.7
AF019406-1|AAC33512.1| 689|Homo sapiens collagen type IX alpha ... 30 7.7
AC112721-1|AAY24135.1| 2588|Homo sapiens unknown protein. 30 7.7
AB209645-1|BAD92882.1| 1027|Homo sapiens alpha 1 type VII collag... 30 7.7
AB209636-1|BAD92873.1| 1702|Homo sapiens alpha 3 type VI collage... 30 7.7
AB209175-1|BAD92412.1| 1658|Homo sapiens collagen, type V, alpha... 30 7.7
AB058761-1|BAB47487.2| 2469|Homo sapiens KIAA1858 protein protein. 30 7.7
>X52773-1|CAA36982.1| 462|Homo sapiens protein ( Human mRNA for
retinoic acid receptor-like protein. ).
Length = 462
Score = 41.5 bits (93), Expect = 0.003
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Frame = +3
Query: 324 GASSPGNMSGAHSDINSPENSMP------GSPLGPKSPSTPKSSDVGSNPGSPTFTQQYS 485
G SPG + S ++SP N M SP+GP S S P + +G + GSP + +
Sbjct: 40 GIGSPGQLHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPTTPTLGFSTGSPQLSSPMN 99
Query: 486 PVPNS 500
PV +S
Sbjct: 100 PVSSS 104
>DQ303444-1|ABB96254.1| 452|Homo sapiens retinoid X receptor, alpha
protein.
Length = 452
Score = 41.5 bits (93), Expect = 0.003
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Frame = +3
Query: 324 GASSPGNMSGAHSDINSPENSMP------GSPLGPKSPSTPKSSDVGSNPGSPTFTQQYS 485
G SPG + S ++SP N M SP+GP S S P + +G + GSP + +
Sbjct: 30 GIGSPGQLHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPTTPTLGFSTGSPQLSSPMN 89
Query: 486 PVPNS 500
PV +S
Sbjct: 90 PVSSS 94
>BC110998-1|AAI10999.1| 462|Homo sapiens retinoid X receptor, alpha
protein.
Length = 462
Score = 41.5 bits (93), Expect = 0.003
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Frame = +3
Query: 324 GASSPGNMSGAHSDINSPENSMP------GSPLGPKSPSTPKSSDVGSNPGSPTFTQQYS 485
G SPG + S ++SP N M SP+GP S S P + +G + GSP + +
Sbjct: 40 GIGSPGQLHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPTTPTLGFSTGSPQLSSPMN 99
Query: 486 PVPNS 500
PV +S
Sbjct: 100 PVSSS 104
>BC063827-1|AAH63827.1| 516|Homo sapiens RXRA protein protein.
Length = 516
Score = 41.5 bits (93), Expect = 0.003
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Frame = +3
Query: 324 GASSPGNMSGAHSDINSPENSMP------GSPLGPKSPSTPKSSDVGSNPGSPTFTQQYS 485
G SPG + S ++SP N M SP+GP S S P + +G + GSP + +
Sbjct: 94 GIGSPGQLHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPTTPTLGFSTGSPQLSSPMN 153
Query: 486 PVPNS 500
PV +S
Sbjct: 154 PVSSS 158
>AL669970-1|CAM45733.1| 462|Homo sapiens retinoid X receptor, alpha
protein.
Length = 462
Score = 41.5 bits (93), Expect = 0.003
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Frame = +3
Query: 324 GASSPGNMSGAHSDINSPENSMP------GSPLGPKSPSTPKSSDVGSNPGSPTFTQQYS 485
G SPG + S ++SP N M SP+GP S S P + +G + GSP + +
Sbjct: 40 GIGSPGQLHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPTTPTLGFSTGSPQLSSPMN 99
Query: 486 PVPNS 500
PV +S
Sbjct: 100 PVSSS 104
>AL354796-1|CAH70571.1| 462|Homo sapiens retinoid X receptor, alpha
protein.
Length = 462
Score = 41.5 bits (93), Expect = 0.003
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Frame = +3
Query: 324 GASSPGNMSGAHSDINSPENSMP------GSPLGPKSPSTPKSSDVGSNPGSPTFTQQYS 485
G SPG + S ++SP N M SP+GP S S P + +G + GSP + +
Sbjct: 40 GIGSPGQLHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPTTPTLGFSTGSPQLSSPMN 99
Query: 486 PVPNS 500
PV +S
Sbjct: 100 PVSSS 104
>AJ890451-1|CAI67595.1| 1125|Homo sapiens collagen, type XXVIII
protein.
Length = 1125
Score = 36.3 bits (80), Expect = 0.12
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDC- 287
GDPG T + G+ G+ GPKG+PG GE E P PG D G +G+C
Sbjct: 248 GDPGPPGTHGNPGIKGERGPKGNPGNAQKGE-AGERGPGGIPGYKG-----DKGERGECG 301
Query: 286 -D*LSGE-GECGPHEP 245
+ G+ G GP+ P
Sbjct: 302 KPGIKGDKGSPGPYGP 317
Score = 30.3 bits (65), Expect = 7.7
Identities = 21/60 (35%), Positives = 27/60 (45%)
Frame = -3
Query: 433 DLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDCD*LSGEGECGP 254
D+G +G GP G PGI GE + P+ PG P G KG+ + G GP
Sbjct: 436 DIGPVGPQGPMGIPGIGSQGEQGIQ-GPIGPPGPQGPAGQGLPGSKGEVGQMGPTGPRGP 494
>X05561-1|CAA29075.1| 944|Homo sapiens protein ( Human mRNA for
alpha-1 chain of collagen IV N-terminus. ).
Length = 944
Score = 35.9 bits (79), Expect = 0.16
Identities = 26/77 (33%), Positives = 34/77 (44%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDCD 284
G PG + ++GV+G G G PG + L E FPG PR D G KGD
Sbjct: 870 GIPGFPGSKGEMGVMGTPGQPGSPGPVGAPGLPGEKGDHGFPGSSGPRG--DPGLKGDKG 927
Query: 283 *LSGEGECGPHEPPDRG 233
+ G+ G + D G
Sbjct: 928 DVGLPGKPGSMDKVDMG 944
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -3
Query: 466 VGDPGLEPTSLDLGVLGDLGPKGDPGIE 383
VG PGL D G G GP+GDPG++
Sbjct: 896 VGAPGLPGEKGDHGFPGSSGPRGDPGLK 923
>M26576-1|AAA53098.1| 1669|Homo sapiens alpha-1 type IV collagen
protein.
Length = 1669
Score = 35.9 bits (79), Expect = 0.16
Identities = 26/77 (33%), Positives = 34/77 (44%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDCD 284
G PG + ++GV+G G G PG + L E FPG PR D G KGD
Sbjct: 870 GIPGFPGSKGEMGVMGTPGQPGSPGPVGAPGLPGEKGDHGFPGSSGPRG--DPGLKGDKG 927
Query: 283 *LSGEGECGPHEPPDRG 233
+ G+ G + D G
Sbjct: 928 DVGLPGKPGSMDKVDMG 944
Score = 32.7 bits (71), Expect = 1.4
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = -3
Query: 466 VGDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVG-CKGD 290
VG PGL D G G GP+GDPG++ + + PG+ +D+G KG
Sbjct: 896 VGAPGLPGEKGDHGFPGSSGPRGDPGLK------GDKGDVGLPGKPGSMDKVDMGSMKGQ 949
Query: 289 CD*LSGEGECGP-HEPPDRGE*G 224
+G+ GP E RG+ G
Sbjct: 950 KGDQGEKGQIGPIGEKGSRGDPG 972
>BC151220-1|AAI51221.1| 1669|Homo sapiens COL4A1 protein protein.
Length = 1669
Score = 35.9 bits (79), Expect = 0.16
Identities = 26/77 (33%), Positives = 34/77 (44%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDCD 284
G PG + ++GV+G G G PG + L E FPG PR D G KGD
Sbjct: 870 GIPGFPGSKGEMGVMGTPGQPGSPGPVGAPGLPGEKGDHGFPGSSGPRG--DPGLKGDKG 927
Query: 283 *LSGEGECGPHEPPDRG 233
+ G+ G + D G
Sbjct: 928 DVGLPGKPGSMDKVDMG 944
Score = 32.7 bits (71), Expect = 1.4
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = -3
Query: 466 VGDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVG-CKGD 290
VG PGL D G G GP+GDPG++ + + PG+ +D+G KG
Sbjct: 896 VGAPGLPGEKGDHGFPGSSGPRGDPGLK------GDKGDVGLPGKPGSMDKVDMGSMKGQ 949
Query: 289 CD*LSGEGECGP-HEPPDRGE*G 224
+G+ GP E RG+ G
Sbjct: 950 KGDQGEKGQIGPIGEKGSRGDPG 972
>BC047305-1|AAH47305.1| 1075|Homo sapiens COL4A1 protein protein.
Length = 1075
Score = 35.9 bits (79), Expect = 0.16
Identities = 26/77 (33%), Positives = 34/77 (44%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDCD 284
G PG + ++GV+G G G PG + L E FPG PR D G KGD
Sbjct: 276 GIPGFPGSKGEMGVMGTPGQPGSPGPVGAPGLPGEKGDHGFPGSSGPRG--DPGLKGDKG 333
Query: 283 *LSGEGECGPHEPPDRG 233
+ G+ G + D G
Sbjct: 334 DVGLPGKPGSMDKVDMG 350
Score = 32.7 bits (71), Expect = 1.4
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = -3
Query: 466 VGDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVG-CKGD 290
VG PGL D G G GP+GDPG++ + + PG+ +D+G KG
Sbjct: 302 VGAPGLPGEKGDHGFPGSSGPRGDPGLK------GDKGDVGLPGKPGSMDKVDMGSMKGQ 355
Query: 289 CD*LSGEGECGP-HEPPDRGE*G 224
+G+ GP E RG+ G
Sbjct: 356 KGDQGEKGQIGPIGEKGSRGDPG 378
>AL390755-2|CAM20295.1| 1318|Homo sapiens collagen type IV alpha 1
protein.
Length = 1318
Score = 35.9 bits (79), Expect = 0.16
Identities = 26/77 (33%), Positives = 34/77 (44%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDCD 284
G PG + ++GV+G G G PG + L E FPG PR D G KGD
Sbjct: 519 GIPGFPGSKGEMGVMGTPGQPGSPGPVGAPGLPGEKGDHGFPGSSGPRG--DPGLKGDKG 576
Query: 283 *LSGEGECGPHEPPDRG 233
+ G+ G + D G
Sbjct: 577 DVGLPGKPGSMDKVDMG 593
Score = 32.7 bits (71), Expect = 1.4
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = -3
Query: 466 VGDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVG-CKGD 290
VG PGL D G G GP+GDPG++ + + PG+ +D+G KG
Sbjct: 545 VGAPGLPGEKGDHGFPGSSGPRGDPGLK------GDKGDVGLPGKPGSMDKVDMGSMKGQ 598
Query: 289 CD*LSGEGECGP-HEPPDRGE*G 224
+G+ GP E RG+ G
Sbjct: 599 KGDQGEKGQIGPIGEKGSRGDPG 621
>AL390755-1|CAH74130.1| 1669|Homo sapiens collagen type IV alpha 1
protein.
Length = 1669
Score = 35.9 bits (79), Expect = 0.16
Identities = 26/77 (33%), Positives = 34/77 (44%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDCD 284
G PG + ++GV+G G G PG + L E FPG PR D G KGD
Sbjct: 870 GIPGFPGSKGEMGVMGTPGQPGSPGPVGAPGLPGEKGDHGFPGSSGPRG--DPGLKGDKG 927
Query: 283 *LSGEGECGPHEPPDRG 233
+ G+ G + D G
Sbjct: 928 DVGLPGKPGSMDKVDMG 944
Score = 32.7 bits (71), Expect = 1.4
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = -3
Query: 466 VGDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVG-CKGD 290
VG PGL D G G GP+GDPG++ + + PG+ +D+G KG
Sbjct: 896 VGAPGLPGEKGDHGFPGSSGPRGDPGLK------GDKGDVGLPGKPGSMDKVDMGSMKGQ 949
Query: 289 CD*LSGEGECGP-HEPPDRGE*G 224
+G+ GP E RG+ G
Sbjct: 950 KGDQGEKGQIGPIGEKGSRGDPG 972
>AL161773-2|CAM14222.1| 1318|Homo sapiens collagen type IV alpha 1
protein.
Length = 1318
Score = 35.9 bits (79), Expect = 0.16
Identities = 26/77 (33%), Positives = 34/77 (44%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDCD 284
G PG + ++GV+G G G PG + L E FPG PR D G KGD
Sbjct: 519 GIPGFPGSKGEMGVMGTPGQPGSPGPVGAPGLPGEKGDHGFPGSSGPRG--DPGLKGDKG 576
Query: 283 *LSGEGECGPHEPPDRG 233
+ G+ G + D G
Sbjct: 577 DVGLPGKPGSMDKVDMG 593
Score = 32.7 bits (71), Expect = 1.4
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = -3
Query: 466 VGDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVG-CKGD 290
VG PGL D G G GP+GDPG++ + + PG+ +D+G KG
Sbjct: 545 VGAPGLPGEKGDHGFPGSSGPRGDPGLK------GDKGDVGLPGKPGSMDKVDMGSMKGQ 598
Query: 289 CD*LSGEGECGP-HEPPDRGE*G 224
+G+ GP E RG+ G
Sbjct: 599 KGDQGEKGQIGPIGEKGSRGDPG 621
>AL161773-1|CAH71365.1| 1669|Homo sapiens collagen type IV alpha 1
protein.
Length = 1669
Score = 35.9 bits (79), Expect = 0.16
Identities = 26/77 (33%), Positives = 34/77 (44%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDCD 284
G PG + ++GV+G G G PG + L E FPG PR D G KGD
Sbjct: 870 GIPGFPGSKGEMGVMGTPGQPGSPGPVGAPGLPGEKGDHGFPGSSGPRG--DPGLKGDKG 927
Query: 283 *LSGEGECGPHEPPDRG 233
+ G+ G + D G
Sbjct: 928 DVGLPGKPGSMDKVDMG 944
Score = 32.7 bits (71), Expect = 1.4
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = -3
Query: 466 VGDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVG-CKGD 290
VG PGL D G G GP+GDPG++ + + PG+ +D+G KG
Sbjct: 896 VGAPGLPGEKGDHGFPGSSGPRGDPGLK------GDKGDVGLPGKPGSMDKVDMGSMKGQ 949
Query: 289 CD*LSGEGECGP-HEPPDRGE*G 224
+G+ GP E RG+ G
Sbjct: 950 KGDQGEKGQIGPIGEKGSRGDPG 972
>AK090416-1|BAC03397.1| 127|Homo sapiens FLJ00318 protein protein.
Length = 127
Score = 35.9 bits (79), Expect = 0.16
Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Frame = +3
Query: 324 GASSPGNMSGAHSDINSPENSMP------GSPLGPKSPSTPKSSDVGSNPGSP 464
G SPG + S ++SP N M SP+GP S S P + +G + GSP
Sbjct: 34 GIGSPGQLHSPISTLSSPINGMGPPFSVISSPMGPHSMSVPTTPTLGFSTGSP 86
>AB209646-1|BAD92883.1| 847|Homo sapiens COL4A1 protein variant
protein.
Length = 847
Score = 35.9 bits (79), Expect = 0.16
Identities = 26/77 (33%), Positives = 34/77 (44%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDCD 284
G PG + ++GV+G G G PG + L E FPG PR D G KGD
Sbjct: 48 GIPGFPGSKGEMGVMGTPGQPGSPGPVGAPGLPGEKGDHGFPGSSGPRG--DPGLKGDKG 105
Query: 283 *LSGEGECGPHEPPDRG 233
+ G+ G + D G
Sbjct: 106 DVGLPGKPGSMDKVDMG 122
Score = 32.7 bits (71), Expect = 1.4
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = -3
Query: 466 VGDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVG-CKGD 290
VG PGL D G G GP+GDPG++ + + PG+ +D+G KG
Sbjct: 74 VGAPGLPGEKGDHGFPGSSGPRGDPGLK------GDKGDVGLPGKPGSMDKVDMGSMKGQ 127
Query: 289 CD*LSGEGECGP-HEPPDRGE*G 224
+G+ GP E RG+ G
Sbjct: 128 KGDQGEKGQIGPIGEKGSRGDPG 150
>Y00706-1|CAA68698.1| 1212|Homo sapiens protein ( Human mRNA for
alpha1 chain of basement membrane (type IV) collagen.in
neoplastic tissue). ).
Length = 1212
Score = 35.5 bits (78), Expect = 0.21
Identities = 26/77 (33%), Positives = 34/77 (44%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDCD 284
G PG + ++GV+G G G PG + L E FPG PR D G KGD
Sbjct: 825 GIPGFPGSKGEMGVMGTPGQPGSPGPWGAPGLPGEKGDHGFPGSSGPRG--DPGLKGDKG 882
Query: 283 *LSGEGECGPHEPPDRG 233
+ G+ G + D G
Sbjct: 883 DVGLPGKPGSMDKVDMG 899
Score = 31.1 bits (67), Expect = 4.4
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVG-CKGDC 287
G PGL D G G GP+GDPG++ + + PG+ +D+G KG
Sbjct: 852 GAPGLPGEKGDHGFPGSSGPRGDPGLK------GDKGDVGLPGKPGSMDKVDMGSMKGQK 905
Query: 286 D*LSGEGECGP-HEPPDRGE*G 224
+G+ GP E RG+ G
Sbjct: 906 GDQGEKGQIGPIGEKGSRGDPG 927
>Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV
protein.
Length = 1690
Score = 34.3 bits (75), Expect = 0.47
Identities = 41/120 (34%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Frame = -3
Query: 598 ESGDAGR-DLVSGEPVGDFVDPLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPTSLDLGV 422
E+G GR D G+P G P GL G G + + +YC +VG+PG + +G
Sbjct: 421 EAGIPGRPDSAPGKP-GKPGSP-GLPGAPGLQGLPGSSVIYC--SVGNPGPQGIKGKVGP 476
Query: 421 LGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDCD*LSGEGECGPHEPP 242
G GPKG+ G E G E P+ PG P G KGD G G PP
Sbjct: 477 PGGRGPKGEKGNE--GLCACEPGPMGPPG--PPGLPGRQGSKGDLGLPGWLGTKGDPGPP 532
>X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4
chain protein.
Length = 1690
Score = 34.3 bits (75), Expect = 0.47
Identities = 41/120 (34%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Frame = -3
Query: 598 ESGDAGR-DLVSGEPVGDFVDPLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPTSLDLGV 422
E+G GR D G+P G P GL G G + + +YC +VG+PG + +G
Sbjct: 421 EAGIPGRPDSAPGKP-GKPGSP-GLPGAPGLQGLPGSSVIYC--SVGNPGPQGIKGKVGP 476
Query: 421 LGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDCD*LSGEGECGPHEPP 242
G GPKG+ G E G E P+ PG P G KGD G G PP
Sbjct: 477 PGGRGPKGEKGNE--GLCACEPGPMGPPG--PPGLPGRQGSKGDLGLPGWLGTKGDPGPP 532
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 34.3 bits (75), Expect = 0.47
Identities = 26/76 (34%), Positives = 31/76 (40%)
Frame = -3
Query: 469 NVGDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGD 290
+VGDPG+E G G +GP+G+ G SGE E PG P G G
Sbjct: 610 SVGDPGMEGPMGQRGREGPMGPRGEAGPPGSGEK-GERGAAGEPGPHGP-----PGVPGS 663
Query: 289 CD*LSGEGECGPHEPP 242
G GP PP
Sbjct: 664 VGPKGSSGSPGPQGPP 679
Score = 30.7 bits (66), Expect = 5.8
Identities = 37/116 (31%), Positives = 43/116 (37%), Gaps = 1/116 (0%)
Frame = -3
Query: 598 ESGDAGRDLVSGEP-VGDFVDPLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPTSLDLGV 422
E G AG G P V V P G G GP GL G+ GL D G
Sbjct: 645 ERGAAGEPGPHGPPGVPGSVGPKGSSGSPGPQGPPGPVGLQG--LRGEVGLPGVKGDKGP 702
Query: 421 LGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDCD*LSGEGECGP 254
+G GPKGD G + L E PG + + G KG +G GP
Sbjct: 703 VGPPGPKGDQGEKGPRGLTGEPGMRGLPGAVG-----EPGAKGAMGPAGPDGHQGP 753
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 34.3 bits (75), Expect = 0.47
Identities = 26/76 (34%), Positives = 31/76 (40%)
Frame = -3
Query: 469 NVGDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGD 290
+VGDPG+E G G +GP+G+ G SGE E PG P G G
Sbjct: 645 SVGDPGMEGPMGQRGREGPMGPRGEAGPPGSGEK-GERGAAGEPGPHGP-----PGVPGS 698
Query: 289 CD*LSGEGECGPHEPP 242
G GP PP
Sbjct: 699 VGPKGSSGSPGPQGPP 714
Score = 31.1 bits (67), Expect = 4.4
Identities = 37/116 (31%), Positives = 43/116 (37%), Gaps = 1/116 (0%)
Frame = -3
Query: 598 ESGDAGRDLVSGEP-VGDFVDPLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPTSLDLGV 422
E G AG G P V V P G G GP GL G+ GL D G
Sbjct: 680 ERGAAGEPGPHGPPGVPGSVGPKGSSGSPGPQGPPGPVGLQG--LRGEVGLPGVKGDKGP 737
Query: 421 LGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDCD*LSGEGECGP 254
+G GPKGD G + L E PG + + G KG +G GP
Sbjct: 738 MGPPGPKGDQGEKGPRGLTGEPGMRGLPGAVG-----EPGAKGAMGPAGPDGHQGP 788
>M63730-1|AAA51839.1| 349|Homo sapiens BPAG2 protein.
Length = 349
Score = 34.3 bits (75), Expect = 0.47
Identities = 26/76 (34%), Positives = 31/76 (40%)
Frame = -3
Query: 469 NVGDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGD 290
+VGDPG+E G G +GP+G+ G SGE E PG P G G
Sbjct: 103 SVGDPGMEGPMGQRGREGPMGPRGEAGPPGSGEK-GERGAAGEPGPHGP-----PGVPGS 156
Query: 289 CD*LSGEGECGPHEPP 242
G GP PP
Sbjct: 157 VGPKGSSGSPGPQGPP 172
Score = 31.1 bits (67), Expect = 4.4
Identities = 37/116 (31%), Positives = 43/116 (37%), Gaps = 1/116 (0%)
Frame = -3
Query: 598 ESGDAGRDLVSGEP-VGDFVDPLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPTSLDLGV 422
E G AG G P V V P G G GP GL G+ GL D G
Sbjct: 138 ERGAAGEPGPHGPPGVPGSVGPKGSSGSPGPQGPPGPVGLQG--LRGEVGLPGVKGDKGP 195
Query: 421 LGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDCD*LSGEGECGP 254
+G GPKGD G + L E PG + + G KG +G GP
Sbjct: 196 MGPPGPKGDQGEKGPRGLTGEPGMRGLPGAVG-----EPGAKGAMGPAGPDGHQGP 246
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 34.3 bits (75), Expect = 0.47
Identities = 26/76 (34%), Positives = 31/76 (40%)
Frame = -3
Query: 469 NVGDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGD 290
+VGDPG+E G G +GP+G+ G SGE E PG P G G
Sbjct: 610 SVGDPGMEGPMGQRGREGPMGPRGEAGPPGSGEK-GERGAAGEPGPHGP-----PGVPGS 663
Query: 289 CD*LSGEGECGPHEPP 242
G GP PP
Sbjct: 664 VGPKGSSGSPGPQGPP 679
Score = 31.1 bits (67), Expect = 4.4
Identities = 37/116 (31%), Positives = 43/116 (37%), Gaps = 1/116 (0%)
Frame = -3
Query: 598 ESGDAGRDLVSGEP-VGDFVDPLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPTSLDLGV 422
E G AG G P V V P G G GP GL G+ GL D G
Sbjct: 645 ERGAAGEPGPHGPPGVPGSVGPKGSSGSPGPQGPPGPVGLQG--LRGEVGLPGVKGDKGP 702
Query: 421 LGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDCD*LSGEGECGP 254
+G GPKGD G + L E PG + + G KG +G GP
Sbjct: 703 MGPPGPKGDQGEKGPRGLTGEPGMRGLPGAVG-----EPGAKGAMGPAGPDGHQGP 753
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 34.3 bits (75), Expect = 0.47
Identities = 26/76 (34%), Positives = 31/76 (40%)
Frame = -3
Query: 469 NVGDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGD 290
+VGDPG+E G G +GP+G+ G SGE E PG P G G
Sbjct: 610 SVGDPGMEGPMGQRGREGPMGPRGEAGPPGSGEK-GERGAAGEPGPHGP-----PGVPGS 663
Query: 289 CD*LSGEGECGPHEPP 242
G GP PP
Sbjct: 664 VGPKGSSGSPGPQGPP 679
Score = 31.1 bits (67), Expect = 4.4
Identities = 37/116 (31%), Positives = 43/116 (37%), Gaps = 1/116 (0%)
Frame = -3
Query: 598 ESGDAGRDLVSGEP-VGDFVDPLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPTSLDLGV 422
E G AG G P V V P G G GP GL G+ GL D G
Sbjct: 645 ERGAAGEPGPHGPPGVPGSVGPKGSSGSPGPQGPPGPVGLQG--LRGEVGLPGVKGDKGP 702
Query: 421 LGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDCD*LSGEGECGP 254
+G GPKGD G + L E PG + + G KG +G GP
Sbjct: 703 MGPPGPKGDQGEKGPRGLTGEPGMRGLPGAVG-----EPGAKGAMGPAGPDGHQGP 753
>AC079235-1|AAY14670.1| 1324|Homo sapiens unknown protein.
Length = 1324
Score = 34.3 bits (75), Expect = 0.47
Identities = 41/120 (34%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Frame = -3
Query: 598 ESGDAGR-DLVSGEPVGDFVDPLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPTSLDLGV 422
E+G GR D G+P G P GL G G + + +YC +VG+PG + +G
Sbjct: 421 EAGIPGRPDSAPGKP-GKPGSP-GLPGAPGLQGLPGSSVIYC--SVGNPGPQGIKGKVGP 476
Query: 421 LGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDCD*LSGEGECGPHEPP 242
G GPKG+ G E G E P+ PG P G KGD G G PP
Sbjct: 477 PGGRGPKGEKGNE--GLCACEPGPMGPPG--PPGLPGRQGSKGDLGLPGWLGTKGDPGPP 532
>BC042075-1|AAH42075.1| 854|Homo sapiens COL22A1 protein protein.
Length = 854
Score = 33.5 bits (73), Expect = 0.83
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*L-DVGCKGDC 287
G+ GL D G G+ GP G PG+ + L + P M PGE P+ D G G+
Sbjct: 73 GELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLFTP-HPRM-PGEQGPKGEKGDPGLPGEP 130
Query: 286 D*LSGEGECGPHEP 245
GE GP P
Sbjct: 131 GLQGRPGELGPQGP 144
Score = 30.7 bits (66), Expect = 5.8
Identities = 19/44 (43%), Positives = 22/44 (50%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGE 332
G GLE S +G G+ G KGDPG G L E P PG+
Sbjct: 752 GQGGLEGPSGPIGPKGERGAKGDPGAPGVG-LRGEMGPPGIPGQ 794
>AF406780-1|AAN03620.1| 1626|Homo sapiens alpha 1 type XXII collagen
protein.
Length = 1626
Score = 33.5 bits (73), Expect = 0.83
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*L-DVGCKGDC 287
G+ GL D G G+ GP G PG+ + L + P M PGE P+ D G G+
Sbjct: 825 GELGLPGLKGDRGEKGEAGPAGPPGLPGTTSLFTP-HPRM-PGEQGPKGEKGDPGLPGEP 882
Query: 286 D*LSGEGECGPHEP 245
GE GP P
Sbjct: 883 GLQGRPGELGPQGP 896
Score = 30.7 bits (66), Expect = 5.8
Identities = 19/44 (43%), Positives = 22/44 (50%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGE 332
G GLE S +G G+ G KGDPG G L E P PG+
Sbjct: 1524 GQGGLEGPSGPIGPKGERGAKGDPGAPGVG-LRGEMGPPGIPGQ 1566
>Z74616-1|CAA98969.1| 1366|Homo sapiens prepro-alpha2(I) collagen
protein.
Length = 1366
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 318 HRGASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSD 440
H G ++G H D +P + P P GP PS P D
Sbjct: 1025 HNGLQGLPGIAGHHGDQGAPGSVGPAGPRGPAGPSGPAGKD 1065
>X55525-1|CAA39142.1| 397|Homo sapiens type I collagen protein.
Length = 397
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 318 HRGASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSD 440
H G ++G H D +P + P P GP PS P D
Sbjct: 66 HNGLQGLPGIAGHHGDQGAPGSVGPAGPRGPAGPSGPAGKD 106
>V00503-1|CAA23761.1| 740|Homo sapiens protein ( Human mRNA
encoding Pro-alpha-2 chain of type I procollagen. (major
part). ).
Length = 740
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 318 HRGASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSD 440
H G ++G H D +P + P P GP PS P D
Sbjct: 403 HNGLQGLPGIAGHHGDQGAPGSVGPAGPRGPAGPSGPAGKD 443
>J03464-1|AAB59374.1| 1366|Homo sapiens COL1A2 protein.
Length = 1366
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 318 HRGASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSD 440
H G ++G H D +P + P P GP PS P D
Sbjct: 1025 HNGLQGLPGIAGHHGDQGAPGSVGPAGPRGPAGPSGPAGKD 1065
>BC117319-1|AAI17320.1| 257|Homo sapiens TPRXL protein protein.
Length = 257
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +3
Query: 306 TSNQHRGASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYS 485
+S+ +SSP + + S NS +S SP S +P+SS S+ S + S
Sbjct: 162 SSSSSPSSSSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPSPRSSSPSSSSSSTSSPSTSS 221
Query: 486 PVPNS 500
P +S
Sbjct: 222 PSSSS 226
Score = 32.7 bits (71), Expect = 1.4
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +3
Query: 306 TSNQHRGASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYS 485
+S+ +SSP + S + S +S +S P S S S+ SS S+P S + + S
Sbjct: 118 SSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSSGS 177
Query: 486 PVPNSMN 506
P+S N
Sbjct: 178 S-PSSSN 183
Score = 31.1 bits (67), Expect = 4.4
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 306 TSNQHRGASSPGNM-SGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQY 482
+S+ +SSP + S + S +SP +S S P S S+ SS S+ SP+ +
Sbjct: 93 SSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPS-SSSS 151
Query: 483 SPVPNS 500
SP +S
Sbjct: 152 SPSSSS 157
Score = 30.3 bits (65), Expect = 7.7
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +3
Query: 327 ASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPNS 500
+SSP + + S +S +S P S SPS+ SS S S + + S P+S
Sbjct: 62 SSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSPSSSNSSSSSSSSSPSS 119
>BC054498-1|AAH54498.1| 1366|Homo sapiens collagen, type I, alpha 2
protein.
Length = 1366
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 318 HRGASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSD 440
H G ++G H D +P + P P GP PS P D
Sbjct: 1025 HNGLQGLPGIAGHHGDQGAPGSVGPAGPRGPAGPSGPAGKD 1065
>BC042586-1|AAH42586.1| 1366|Homo sapiens collagen, type I, alpha 2
protein.
Length = 1366
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 318 HRGASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSD 440
H G ++G H D +P + P P GP PS P D
Sbjct: 1025 HNGLQGLPGIAGHHGDQGAPGSVGPAGPRGPAGPSGPAGKD 1065
>AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ35107 fis, clone PLACE6006871, moderately
similar to SUPPRESSOR PROTEIN SRP40. ).
Length = 258
Score = 33.1 bits (72), Expect = 1.1
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +3
Query: 306 TSNQHRGASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYS 485
+S+ +SSP + + S NS +S SP S +P+SS S+ S + S
Sbjct: 163 SSSSSPSSSSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPSPRSSSPSSSSSSTSSPSTSS 222
Query: 486 PVPNS 500
P +S
Sbjct: 223 PSSSS 227
Score = 32.7 bits (71), Expect = 1.4
Identities = 21/67 (31%), Positives = 33/67 (49%)
Frame = +3
Query: 306 TSNQHRGASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYS 485
+S+ +SSP + S + S +S +S P S S S+ SS S+P S + + S
Sbjct: 119 SSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSSGS 178
Query: 486 PVPNSMN 506
P+S N
Sbjct: 179 S-PSSSN 184
Score = 31.1 bits (67), Expect = 4.4
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 327 ASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGS 461
+SSP + + S +S +S P S SPS+ SS S+P S
Sbjct: 62 SSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSS 106
Score = 31.1 bits (67), Expect = 4.4
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 306 TSNQHRGASSPGNM-SGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQY 482
+S+ +SSP + S + S +SP +S S P S S+ SS S+ SP+ +
Sbjct: 94 SSSSSSSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPS-SSSS 152
Query: 483 SPVPNS 500
SP +S
Sbjct: 153 SPSSSS 158
Score = 30.7 bits (66), Expect = 5.8
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +3
Query: 327 ASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPNS 500
+SS + S +HS + + SP S S+P SS S+ SP+ + S +S
Sbjct: 59 SSSSSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSSSSSSS 116
>AF144235-1|AAD33923.1| 154|Homo sapiens hypothetical protein
SBBI42 protein.
Length = 154
Score = 33.1 bits (72), Expect = 1.1
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +3
Query: 354 AHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGS---PTFTQQYSPVPNSMNE 509
+H + SP S PGS LG S + D GS+PGS T Q P P ++++
Sbjct: 83 SHLPLPSPIFSYPGSSLGKMSQAEHSIQDTGSSPGSRSMGTLIVQGIPSPTTIHK 137
>AF004877-1|AAB93981.1| 1366|Homo sapiens pro-alpha 2(I) collagen
protein.
Length = 1366
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 318 HRGASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSD 440
H G ++G H D +P + P P GP PS P D
Sbjct: 1025 HNGLQGLPGIAGHHGDQGAPGSVGPAGPRGPAGPSGPAGKD 1065
>AC002528-1|AAB69977.1| 1186|Homo sapiens alpha2(I) collagen
protein.
Length = 1186
Score = 33.1 bits (72), Expect = 1.1
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3
Query: 318 HRGASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSD 440
H G ++G H D +P + P P GP PS P D
Sbjct: 845 HNGLQGLPGIAGHHGDQGAPGSVGPAGPRGPAGPSGPAGKD 885
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 32.7 bits (71), Expect = 1.4
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +3
Query: 324 GASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSP--TFTQQYSPVPN 497
G S + +HS++ + + PG P PS ++S V S+ SP T T +S +P
Sbjct: 8524 GTHSTASPGFSHSEMTTLMSRTPGDVPWPSLPSVEEASSVSSSLSSPAMTSTSFFSALPE 8583
Query: 498 SMN 506
S++
Sbjct: 8584 SIS 8586
>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
Length = 6995
Score = 32.7 bits (71), Expect = 1.4
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +3
Query: 324 GASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSP--TFTQQYSPVPN 497
G S + +HS++ + + PG P PS ++S V S+ SP T T +S +P
Sbjct: 228 GTHSTASPGFSHSEMTTLMSRTPGDVPWPSLPSVEEASSVSSSLSSPAMTSTSFFSTLPE 287
Query: 498 SMN 506
S++
Sbjct: 288 SIS 290
>CR456360-1|CAG30246.1| 473|Homo sapiens Em:AC007663.1 protein.
Length = 473
Score = 32.3 bits (70), Expect = 1.9
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 324 GASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
G S PGN SG +SP ++PGS P + P+ S+ PG PT
Sbjct: 366 GDSPPGNGSGPRHINDSPFGTLPGSAEPPLTAVRPEGSE---PPGFPT 410
>BC117170-1|AAI17171.1| 1714|Homo sapiens collagen, type XXIV, alpha
1 protein.
Length = 1714
Score = 32.3 bits (70), Expect = 1.9
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Frame = -3
Query: 598 ESGDAGRDLVSGEPVGD-FVDPLGLCGVFGPSFI--LLGTGLYC*VNVGDPGLEPTSLD- 431
++GD G SG P + F +G+ G GP LLG G PGL+ T +
Sbjct: 754 QTGDPGLQGPSGPPGPEGFPGDIGIPGQNGPEGPKGLLGNR----GPPGPPGLKGTQGEE 809
Query: 430 --LGVLGDLGPKGDPGIE-FSGE 371
+G G+LGP+G PG + ++GE
Sbjct: 810 GPIGAFGELGPRGKPGQKGYAGE 832
Score = 31.1 bits (67), Expect = 4.4
Identities = 29/84 (34%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = -3
Query: 463 GDPGLEPTSLD--LGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDV-GCKG 293
GD G P LD G++G GP G PG+ S + P PG + + G KG
Sbjct: 657 GDRG--PAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGIKG 714
Query: 292 DCD*LSGEGECG-PHEPPDRGE*G 224
D GE G P P D+G G
Sbjct: 715 DKGEQGTAGELGEPGYPGDKGAVG 738
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -3
Query: 469 NVGDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPR 320
++G PG G+LG+ GP G PG++ + E P+ GEL PR
Sbjct: 775 DIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQ---GEEGPIGAFGELGPR 821
>BC113654-1|AAI13655.1| 1714|Homo sapiens collagen, type XXIV, alpha
1 protein.
Length = 1714
Score = 32.3 bits (70), Expect = 1.9
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Frame = -3
Query: 598 ESGDAGRDLVSGEPVGD-FVDPLGLCGVFGPSFI--LLGTGLYC*VNVGDPGLEPTSLD- 431
++GD G SG P + F +G+ G GP LLG G PGL+ T +
Sbjct: 754 QTGDPGLQGPSGPPGPEGFPGDIGIPGQNGPEGPKGLLGNR----GPPGPPGLKGTQGEE 809
Query: 430 --LGVLGDLGPKGDPGIE-FSGE 371
+G G+LGP+G PG + ++GE
Sbjct: 810 GPIGAFGELGPRGKPGQKGYAGE 832
Score = 31.1 bits (67), Expect = 4.4
Identities = 29/84 (34%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = -3
Query: 463 GDPGLEPTSLD--LGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDV-GCKG 293
GD G P LD G++G GP G PG+ S + P PG + + G KG
Sbjct: 657 GDRG--PAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGIKG 714
Query: 292 DCD*LSGEGECG-PHEPPDRGE*G 224
D GE G P P D+G G
Sbjct: 715 DKGEQGTAGELGEPGYPGDKGAVG 738
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -3
Query: 469 NVGDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPR 320
++G PG G+LG+ GP G PG++ + E P+ GEL PR
Sbjct: 775 DIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQ---GEEGPIGAFGELGPR 821
>BC011787-1|AAH11787.1| 473|Homo sapiens reticulon 4 receptor
protein.
Length = 473
Score = 32.3 bits (70), Expect = 1.9
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 324 GASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
G S PGN SG +SP ++PGS P + P+ S+ PG PT
Sbjct: 366 GDSPPGNGSGPRHINDSPFGTLPGSAEPPLTAVRPEGSE---PPGFPT 410
>AY358297-1|AAQ88664.1| 473|Homo sapiens NOGOR protein.
Length = 473
Score = 32.3 bits (70), Expect = 1.9
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 324 GASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
G S PGN SG +SP ++PGS P + P+ S+ PG PT
Sbjct: 366 GDSPPGNGSGPRHINDSPFGTLPGSAEPPLTAVRPEGSE---PPGFPT 410
>AY244357-1|AAP80185.1| 1714|Homo sapiens alpha 1 type XXIV collagen
precursor protein.
Length = 1714
Score = 32.3 bits (70), Expect = 1.9
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Frame = -3
Query: 598 ESGDAGRDLVSGEPVGD-FVDPLGLCGVFGPSFI--LLGTGLYC*VNVGDPGLEPTSLD- 431
++GD G SG P + F +G+ G GP LLG G PGL+ T +
Sbjct: 754 QTGDPGLQGPSGPPGPEGFPGDIGIPGQNGPEGPKGLLGNR----GPPGPPGLKGTQGEE 809
Query: 430 --LGVLGDLGPKGDPGIE-FSGE 371
+G G+LGP+G PG + ++GE
Sbjct: 810 GPIGAFGELGPRGKPGQKGYAGE 832
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -3
Query: 469 NVGDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPR 320
++G PG G+LG+ GP G PG++ + E P+ GEL PR
Sbjct: 775 DIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQ---GEEGPIGAFGELGPR 821
>AL445427-1|CAI19120.1| 1714|Homo sapiens collagen, type XXIV, alpha
1 protein.
Length = 1714
Score = 32.3 bits (70), Expect = 1.9
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Frame = -3
Query: 598 ESGDAGRDLVSGEPVGD-FVDPLGLCGVFGPSFI--LLGTGLYC*VNVGDPGLEPTSLD- 431
++GD G SG P + F +G+ G GP LLG G PGL+ T +
Sbjct: 754 QTGDPGLQGPSGPPGPEGFPGDIGIPGQNGPEGPKGLLGNR----GPPGPPGLKGTQGEE 809
Query: 430 --LGVLGDLGPKGDPGIE-FSGE 371
+G G+LGP+G PG + ++GE
Sbjct: 810 GPIGAFGELGPRGKPGQKGYAGE 832
Score = 31.1 bits (67), Expect = 4.4
Identities = 29/84 (34%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = -3
Query: 463 GDPGLEPTSLD--LGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDV-GCKG 293
GD G P LD G++G GP G PG+ S + P PG + + G KG
Sbjct: 657 GDRG--PAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGIKG 714
Query: 292 DCD*LSGEGECG-PHEPPDRGE*G 224
D GE G P P D+G G
Sbjct: 715 DKGEQGTAGELGEPGYPGDKGAVG 738
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -3
Query: 469 NVGDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPR 320
++G PG G+LG+ GP G PG++ + E P+ GEL PR
Sbjct: 775 DIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQ---GEEGPIGAFGELGPR 821
>AL359971-1|CAI16233.1| 1714|Homo sapiens collagen, type XXIV, alpha
1 protein.
Length = 1714
Score = 32.3 bits (70), Expect = 1.9
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Frame = -3
Query: 598 ESGDAGRDLVSGEPVGD-FVDPLGLCGVFGPSFI--LLGTGLYC*VNVGDPGLEPTSLD- 431
++GD G SG P + F +G+ G GP LLG G PGL+ T +
Sbjct: 754 QTGDPGLQGPSGPPGPEGFPGDIGIPGQNGPEGPKGLLGNR----GPPGPPGLKGTQGEE 809
Query: 430 --LGVLGDLGPKGDPGIE-FSGE 371
+G G+LGP+G PG + ++GE
Sbjct: 810 GPIGAFGELGPRGKPGQKGYAGE 832
Score = 31.1 bits (67), Expect = 4.4
Identities = 29/84 (34%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = -3
Query: 463 GDPGLEPTSLD--LGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDV-GCKG 293
GD G P LD G++G GP G PG+ S + P PG + + G KG
Sbjct: 657 GDRG--PAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGIKG 714
Query: 292 DCD*LSGEGECG-PHEPPDRGE*G 224
D GE G P P D+G G
Sbjct: 715 DKGEQGTAGELGEPGYPGDKGAVG 738
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -3
Query: 469 NVGDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPR 320
++G PG G+LG+ GP G PG++ + E P+ GEL PR
Sbjct: 775 DIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQ---GEEGPIGAFGELGPR 821
>AL356059-1|CAH71121.1| 1714|Homo sapiens collagen, type XXIV, alpha
1 protein.
Length = 1714
Score = 32.3 bits (70), Expect = 1.9
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Frame = -3
Query: 598 ESGDAGRDLVSGEPVGD-FVDPLGLCGVFGPSFI--LLGTGLYC*VNVGDPGLEPTSLD- 431
++GD G SG P + F +G+ G GP LLG G PGL+ T +
Sbjct: 754 QTGDPGLQGPSGPPGPEGFPGDIGIPGQNGPEGPKGLLGNR----GPPGPPGLKGTQGEE 809
Query: 430 --LGVLGDLGPKGDPGIE-FSGE 371
+G G+LGP+G PG + ++GE
Sbjct: 810 GPIGAFGELGPRGKPGQKGYAGE 832
Score = 31.1 bits (67), Expect = 4.4
Identities = 29/84 (34%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = -3
Query: 463 GDPGLEPTSLD--LGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDV-GCKG 293
GD G P LD G++G GP G PG+ S + P PG + + G KG
Sbjct: 657 GDRG--PAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGIKG 714
Query: 292 DCD*LSGEGECG-PHEPPDRGE*G 224
D GE G P P D+G G
Sbjct: 715 DKGEQGTAGELGEPGYPGDKGAVG 738
Score = 30.7 bits (66), Expect = 5.8
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -3
Query: 469 NVGDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPR 320
++G PG G+LG+ GP G PG++ + E P+ GEL PR
Sbjct: 775 DIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQ---GEEGPIGAFGELGPR 821
>AF283463-1|AAG53612.1| 473|Homo sapiens Nogo receptor protein.
Length = 473
Score = 32.3 bits (70), Expect = 1.9
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 324 GASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPT 467
G S PGN SG +SP ++PGS P + P+ S+ PG PT
Sbjct: 366 GDSPPGNGSGPRHINDSPFGTLPGSAEPPLTAVRPEGSE---PPGFPT 410
>U47004-2|AAB19039.1| 1690|Homo sapiens collagen type IV a6 chain
protein.
Length = 1690
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPG 335
GDPGL D G+ G GP G PG+ + P FPG
Sbjct: 364 GDPGLPGLKGDEGIQGLRGPSGVPGLPALSGVPGALGPQGFPG 406
>U47004-1|AAB19038.1| 1691|Homo sapiens collagen type IV a6 chain
protein.
Length = 1691
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPG 335
GDPGL D G+ G GP G PG+ + P FPG
Sbjct: 365 GDPGLPGLKGDEGIQGLRGPSGVPGLPALSGVPGALGPQGFPG 407
>S57132-1|AAB25797.1| 1186|Homo sapiens type XVI collagen alpha 1
chain protein.
Length = 1186
Score = 31.9 bits (69), Expect = 2.5
Identities = 26/74 (35%), Positives = 30/74 (40%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDCD 284
G PGL + G G G KG+PG S L P GE P+ + G KGD
Sbjct: 678 GPPGLPGIKGERGYTGSAGEKGEPGPPGSEGLPGPPGPAGPRGERGPQG--NSGEKGDQG 735
Query: 283 *LSGEGECGPHEPP 242
G GP PP
Sbjct: 736 FQGQPGFPGPPGPP 749
>M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collagen
protein.
Length = 1838
Score = 31.9 bits (69), Expect = 2.5
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Frame = -3
Query: 466 VGDPGLEPTSLDLGV---LGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCK 296
+G PG + D G+ G GPKG+ GI I P PG P+ G K
Sbjct: 1491 IGPPGEQGEKGDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPK-----GAK 1545
Query: 295 GDCD*LSGEGECGPHEPP 242
G +GE G PP
Sbjct: 1546 GSSGPTGPKGEAGHPGPP 1563
>BC008760-1|AAH08760.3| 591|Homo sapiens COL5A1 protein protein.
Length = 591
Score = 31.9 bits (69), Expect = 2.5
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Frame = -3
Query: 466 VGDPGLEPTSLDLGV---LGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCK 296
+G PG + D G+ G GPKG+ GI I P PG P+ G K
Sbjct: 244 IGPPGEQGEKGDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPK-----GAK 298
Query: 295 GDCD*LSGEGECGPHEPP 242
G +GE G PP
Sbjct: 299 GSSGPTGPKGEAGHPGPP 316
>AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 31.9 bits (69), Expect = 2.5
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Frame = -3
Query: 466 VGDPGLEPTSLDLGV---LGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCK 296
+G PG + D G+ G GPKG+ GI I P PG P+ G K
Sbjct: 1491 IGPPGEQGEKGDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPK-----GAK 1545
Query: 295 GDCD*LSGEGECGPHEPP 242
G +GE G PP
Sbjct: 1546 GSSGPTGPKGEAGHPGPP 1563
>AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 31.9 bits (69), Expect = 2.5
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Frame = -3
Query: 466 VGDPGLEPTSLDLGV---LGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCK 296
+G PG + D G+ G GPKG+ GI I P PG P+ G K
Sbjct: 1491 IGPPGEQGEKGDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPK-----GAK 1545
Query: 295 GDCD*LSGEGECGPHEPP 242
G +GE G PP
Sbjct: 1546 GSSGPTGPKGEAGHPGPP 1563
>AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 31.9 bits (69), Expect = 2.5
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Frame = -3
Query: 466 VGDPGLEPTSLDLGV---LGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCK 296
+G PG + D G+ G GPKG+ GI I P PG P+ G K
Sbjct: 1491 IGPPGEQGEKGDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPK-----GAK 1545
Query: 295 GDCD*LSGEGECGPHEPP 242
G +GE G PP
Sbjct: 1546 GSSGPTGPKGEAGHPGPP 1563
>AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V collagen
variant protein.
Length = 1792
Score = 31.9 bits (69), Expect = 2.5
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Frame = -3
Query: 466 VGDPGLEPTSLDLGV---LGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCK 296
+G PG + D G+ G GPKG+ GI I P PG P+ G K
Sbjct: 1445 IGPPGEQGEKGDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPK-----GAK 1499
Query: 295 GDCD*LSGEGECGPHEPP 242
G +GE G PP
Sbjct: 1500 GSSGPTGPKGEAGHPGPP 1517
>AB209571-1|BAD92808.1| 1463|Homo sapiens alpha 1 type XVI collagen
precursor variant protein.
Length = 1463
Score = 31.9 bits (69), Expect = 2.5
Identities = 26/74 (35%), Positives = 30/74 (40%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDCD 284
G PGL + G G G KG+PG S L P GE P+ + G KGD
Sbjct: 955 GPPGLPGIKGERGYTGSAGEKGEPGPPGSEGLPGPPGPAGPRGERGPQG--NSGEKGDQG 1012
Query: 283 *LSGEGECGPHEPP 242
G GP PP
Sbjct: 1013 FQGQPGFPGPPGPP 1026
>J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein.
Length = 1806
Score = 31.5 bits (68), Expect = 3.3
Identities = 24/68 (35%), Positives = 33/68 (48%)
Frame = -3
Query: 592 GDAGRDLVSGEPVGDFVDPLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPTSLDLGVLGD 413
G G D + GE G+ + P GL G GP +L G G PG+ G G+
Sbjct: 625 GPPGDDGMRGED-GE-IGPRGLPGEAGPRGLLGPRGTPG--APGQPGMAGVDGPPGPKGN 680
Query: 412 LGPKGDPG 389
+GP+G+PG
Sbjct: 681 MGPQGEPG 688
>D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain
precursor protein.
Length = 1838
Score = 31.5 bits (68), Expect = 3.3
Identities = 25/78 (32%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
Frame = -3
Query: 466 VGDPGLEPTSLDLGV---LGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCK 296
+G PG + D G+ G GPKG+ GI I P PG P+ G K
Sbjct: 1491 IGPPGEQGEKGDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPK-----GAK 1545
Query: 295 GDCD*LSGEGECGPHEPP 242
G GE G PP
Sbjct: 1546 GSSGPTGPRGEAGHPGPP 1563
>BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.
Length = 1690
Score = 31.5 bits (68), Expect = 3.3
Identities = 24/68 (35%), Positives = 33/68 (48%)
Frame = -3
Query: 592 GDAGRDLVSGEPVGDFVDPLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPTSLDLGVLGD 413
G G D + GE G+ + P GL G GP +L G G PG+ G G+
Sbjct: 509 GPPGDDGMRGED-GE-IGPRGLPGEAGPRGLLGPRGTPG--APGQPGMAGVDGPPGPKGN 564
Query: 412 LGPKGDPG 389
+GP+G+PG
Sbjct: 565 MGPQGEPG 572
>AM260536-1|CAJ97431.1| 1266|Homo sapiens ponsin protein.
Length = 1266
Score = 31.5 bits (68), Expect = 3.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 360 SDINSPENSMPGSPLGPKSPST 425
SD+N+PE S PG PLG P +
Sbjct: 1121 SDLNTPEESRPGKPLGSAFPGS 1142
>AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha 1
protein.
Length = 1806
Score = 31.5 bits (68), Expect = 3.3
Identities = 24/68 (35%), Positives = 33/68 (48%)
Frame = -3
Query: 592 GDAGRDLVSGEPVGDFVDPLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPTSLDLGVLGD 413
G G D + GE G+ + P GL G GP +L G G PG+ G G+
Sbjct: 625 GPPGDDGMRGED-GE-IGPRGLPGEAGPRGLLGPRGTPG--APGQPGMAGVDGPPGPKGN 680
Query: 412 LGPKGDPG 389
+GP+G+PG
Sbjct: 681 MGPQGEPG 688
>AL158165-7|CAI14379.1| 1292|Homo sapiens sorbin and SH3 domain
containing 1 protein.
Length = 1292
Score = 31.5 bits (68), Expect = 3.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 360 SDINSPENSMPGSPLGPKSPST 425
SD+N+PE S PG PLG P +
Sbjct: 1167 SDLNTPEESRPGKPLGSAFPGS 1188
>AL158165-5|CAI14381.1| 1151|Homo sapiens sorbin and SH3 domain
containing 1 protein.
Length = 1151
Score = 31.5 bits (68), Expect = 3.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 360 SDINSPENSMPGSPLGPKSPST 425
SD+N+PE S PG PLG P +
Sbjct: 1026 SDLNTPEESRPGKPLGSAFPGS 1047
>AF356526-1|AAK37564.1| 1151|Homo sapiens sorbin and SH3 domain
containing 1 protein.
Length = 1151
Score = 31.5 bits (68), Expect = 3.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 360 SDINSPENSMPGSPLGPKSPST 425
SD+N+PE S PG PLG P +
Sbjct: 1026 SDLNTPEESRPGKPLGSAFPGS 1047
>AF356525-1|AAK37563.1| 1292|Homo sapiens sorbin and SH3 domain
containing 1 protein.
Length = 1292
Score = 31.5 bits (68), Expect = 3.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 360 SDINSPENSMPGSPLGPKSPST 425
SD+N+PE S PG PLG P +
Sbjct: 1167 SDLNTPEESRPGKPLGSAFPGS 1188
>AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-1
protein.
Length = 1767
Score = 31.5 bits (68), Expect = 3.3
Identities = 24/68 (35%), Positives = 33/68 (48%)
Frame = -3
Query: 592 GDAGRDLVSGEPVGDFVDPLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPTSLDLGVLGD 413
G G D + GE G+ + P GL G GP +L G G PG+ G G+
Sbjct: 586 GPPGDDGMRGED-GE-IGPRGLPGEAGPRGLLGPRGTPG--APGQPGMAGVDGPPGPKGN 641
Query: 412 LGPKGDPG 389
+GP+G+PG
Sbjct: 642 MGPQGEPG 649
>AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-a
isoform B protein.
Length = 1818
Score = 31.5 bits (68), Expect = 3.3
Identities = 24/68 (35%), Positives = 33/68 (48%)
Frame = -3
Query: 592 GDAGRDLVSGEPVGDFVDPLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPTSLDLGVLGD 413
G G D + GE G+ + P GL G GP +L G G PG+ G G+
Sbjct: 637 GPPGDDGMRGED-GE-IGPRGLPGEAGPRGLLGPRGTPG--APGQPGMAGVDGPPGPKGN 692
Query: 412 LGPKGDPG 389
+GP+G+PG
Sbjct: 693 MGPQGEPG 700
>AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-1
isoform A protein.
Length = 1806
Score = 31.5 bits (68), Expect = 3.3
Identities = 24/68 (35%), Positives = 33/68 (48%)
Frame = -3
Query: 592 GDAGRDLVSGEPVGDFVDPLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPTSLDLGVLGD 413
G G D + GE G+ + P GL G GP +L G G PG+ G G+
Sbjct: 625 GPPGDDGMRGED-GE-IGPRGLPGEAGPRGLLGPRGTPG--APGQPGMAGVDGPPGPKGN 680
Query: 412 LGPKGDPG 389
+GP+G+PG
Sbjct: 681 MGPQGEPG 688
>L12347-1|AAA36358.1| 718|Homo sapiens collagen protein.
Length = 718
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGEL 329
GDP L + + G+ GDLGP G PG + P PG L
Sbjct: 244 GDPALAGLNGENGLKGDLGPHGPPGPKGEKGDTGPPGPPALPGSL 288
>BC116180-1|AAI16181.1| 846|Homo sapiens COL24A1 protein protein.
Length = 846
Score = 31.1 bits (67), Expect = 4.4
Identities = 29/84 (34%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
Frame = -3
Query: 463 GDPGLEPTSLD--LGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDV-GCKG 293
GD G P LD G++G GP G PG+ S + P PG + + G KG
Sbjct: 657 GDRG--PAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGIKG 714
Query: 292 DCD*LSGEGECG-PHEPPDRGE*G 224
D GE G P P D+G G
Sbjct: 715 DKGEQGTAGELGEPGYPGDKGAVG 738
>BC113364-1|AAI13365.1| 1142|Homo sapiens collagen, type XIX, alpha
1 protein.
Length = 1142
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGEL 329
GDP L + + G+ GDLGP G PG + P PG L
Sbjct: 349 GDPALAGLNGENGLKGDLGPHGPPGPKGEKGDTGPPGPPALPGSL 393
>BC113362-1|AAI13363.1| 1142|Homo sapiens collagen, type XIX, alpha
1 protein.
Length = 1142
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGEL 329
GDP L + + G+ GDLGP G PG + P PG L
Sbjct: 349 GDPALAGLNGENGLKGDLGPHGPPGPKGEKGDTGPPGPPALPGSL 393
>AL359539-1|CAI16492.1| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGEL 329
GDP L + + G+ GDLGP G PG + P PG L
Sbjct: 349 GDPALAGLNGENGLKGDLGPHGPPGPKGEKGDTGPPGPPALPGSL 393
>AL160262-5|CAI42322.1| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGEL 329
GDP L + + G+ GDLGP G PG + P PG L
Sbjct: 349 GDPALAGLNGENGLKGDLGPHGPPGPKGEKGDTGPPGPPALPGSL 393
>AL136445-2|CAI42716.1| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGEL 329
GDP L + + G+ GDLGP G PG + P PG L
Sbjct: 349 GDPALAGLNGENGLKGDLGPHGPPGPKGEKGDTGPPGPPALPGSL 393
>AL133388-3|CAI42497.1| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGEL 329
GDP L + + G+ GDLGP G PG + P PG L
Sbjct: 349 GDPALAGLNGENGLKGDLGPHGPPGPKGEKGDTGPPGPPALPGSL 393
>AL118519-1|CAB99331.2| 1142|Homo sapiens collagen type XIX alpha 1
protein.
Length = 1142
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGEL 329
GDP L + + G+ GDLGP G PG + P PG L
Sbjct: 349 GDPALAGLNGENGLKGDLGPHGPPGPKGEKGDTGPPGPPALPGSL 393
>AF217500-1|AAL56647.1| 2072|Homo sapiens histone acetyltransferase
MOZ2 protein.
Length = 2072
Score = 31.1 bits (67), Expect = 4.4
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 312 NQHRGASSPGNMSGAHSDINSPENSMPG-SPLGPKSPSTPKSSDVGSNPGSPTFTQQYSP 488
+Q + +S +G + P +S+P +P+ +SPS+ KSS S+P SP +
Sbjct: 469 SQKQSCTSHVLATGTTQKLKPPPSSLPPPTPISGQSPSSQKSSTATSSP-SPQSSSSQCS 527
Query: 489 VPN 497
VP+
Sbjct: 528 VPS 530
>AF119231-1|AAF00100.1| 2073|Homo sapiens histone acetyltransferase
MORF beta protein.
Length = 2073
Score = 31.1 bits (67), Expect = 4.4
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 312 NQHRGASSPGNMSGAHSDINSPENSMPG-SPLGPKSPSTPKSSDVGSNPGSPTFTQQYSP 488
+Q + +S +G + P +S+P +P+ +SPS+ KSS S+P SP +
Sbjct: 469 SQKQSCTSHVLATGTTQKLKPPPSSLPPPTPISGQSPSSQKSSTATSSP-SPQSSSSQCS 527
Query: 489 VPN 497
VP+
Sbjct: 528 VPS 530
>AB004629-1|BAA23309.1| 1143|Homo sapiens Type XIX collagen a1 chain
protein.
Length = 1143
Score = 31.1 bits (67), Expect = 4.4
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGEL 329
GDP L + + G+ GDLGP G PG + P PG L
Sbjct: 350 GDPALAGLNGENGLKGDLGPHGPPGPKGEKGDTGPPGPPALPGSL 394
>X54412-1|CAA38276.1| 931|Homo sapiens protein ( Human mRNA for
alpha1(IX) collagen (long form). ).
Length = 931
Score = 30.7 bits (66), Expect = 5.8
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGE 371
G PGL D GV+G+ GPKG+ G SGE
Sbjct: 655 GPPGLPGMKGDRGVVGEPGPKGEQGA--SGE 683
>M65158-1|AAA96439.1| 625|Homo sapiens type VII collagen protein.
Length = 625
Score = 30.7 bits (66), Expect = 5.8
Identities = 26/74 (35%), Positives = 31/74 (41%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDCD 284
G PGL D G G GPKG+PG G++I P + PG D G G
Sbjct: 512 GSPGLPGPRGDPGERGPRGPKGEPGA--PGQVIGGEGPGL-PGRKG-----DPGPSGPPG 563
Query: 283 *LSGEGECGPHEPP 242
G+ GP PP
Sbjct: 564 PRGPLGDPGPRGPP 577
>L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein.
Length = 2912
Score = 30.7 bits (66), Expect = 5.8
Identities = 26/74 (35%), Positives = 31/74 (41%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDCD 284
G PGL D G G GPKG+PG G++I P + PG D G G
Sbjct: 1326 GSPGLPGPRGDPGERGPRGPKGEPGA--PGQVIGGEGPGL-PGRKG-----DPGPSGPPG 1377
Query: 283 *LSGEGECGPHEPP 242
G+ GP PP
Sbjct: 1378 PRGPLGDPGPRGPP 1391
Score = 30.3 bits (65), Expect = 7.7
Identities = 25/71 (35%), Positives = 30/71 (42%)
Frame = -3
Query: 598 ESGDAGRDLVSGEPVGDFVDPLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPTSLDLGVL 419
E G+ GRD G P G G GP + G G PGL+ + G
Sbjct: 2036 ERGEQGRDGPPGLP-----GTPGPPGPPGPKVSVDEPGPGLSGEQGPPGLKGAKGEPGSN 2090
Query: 418 GDLGPKGDPGI 386
GD GPKGD G+
Sbjct: 2091 GDQGPKGDRGV 2101
>L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen
protein.
Length = 2944
Score = 30.7 bits (66), Expect = 5.8
Identities = 26/74 (35%), Positives = 31/74 (41%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDCD 284
G PGL D G G GPKG+PG G++I P + PG D G G
Sbjct: 1326 GSPGLPGPRGDPGERGPRGPKGEPGA--PGQVIGGEGPGL-PGRKG-----DPGPSGPPG 1377
Query: 283 *LSGEGECGPHEPP 242
G+ GP PP
Sbjct: 1378 PRGPLGDPGPRGPP 1391
Score = 30.3 bits (65), Expect = 7.7
Identities = 25/71 (35%), Positives = 30/71 (42%)
Frame = -3
Query: 598 ESGDAGRDLVSGEPVGDFVDPLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPTSLDLGVL 419
E G+ GRD G P G G GP + G G PGL+ + G
Sbjct: 2068 ERGEQGRDGPPGLP-----GTPGPPGPPGPKVSVDEPGPGLSGEQGPPGLKGAKGEPGSN 2122
Query: 418 GDLGPKGDPGI 386
GD GPKGD G+
Sbjct: 2123 GDQGPKGDRGV 2133
>BC063646-1|AAH63646.1| 678|Homo sapiens collagen, type IX, alpha 1
protein.
Length = 678
Score = 30.7 bits (66), Expect = 5.8
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGE 371
G PGL D GV+G+ GPKG+ G SGE
Sbjct: 412 GPPGLPGMKGDRGVVGEPGPKGEQGA--SGE 440
>AL160262-4|CAI42321.1| 921|Homo sapiens collagen type IX alpha 1
protein.
Length = 921
Score = 30.7 bits (66), Expect = 5.8
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGE 371
G PGL D GV+G+ GPKG+ G SGE
Sbjct: 655 GPPGLPGMKGDRGVVGEPGPKGEQGA--SGE 683
>AL160262-3|CAI42320.1| 448|Homo sapiens collagen type IX alpha 1
protein.
Length = 448
Score = 30.7 bits (66), Expect = 5.8
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGE 371
G PGL D GV+G+ GPKG+ G SGE
Sbjct: 412 GPPGLPGMKGDRGVVGEPGPKGEQGA--SGE 440
>AL160262-2|CAO03366.1| 227|Homo sapiens collagen type IX alpha 1
protein.
Length = 227
Score = 30.7 bits (66), Expect = 5.8
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGE 371
G PGL D GV+G+ GPKG+ G SGE
Sbjct: 118 GPPGLPGMKGDRGVVGEPGPKGEQGA--SGE 146
>AL080275-3|CAI19590.1| 921|Homo sapiens collagen type IX alpha 1
protein.
Length = 921
Score = 30.7 bits (66), Expect = 5.8
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGE 371
G PGL D GV+G+ GPKG+ G SGE
Sbjct: 655 GPPGLPGMKGDRGVVGEPGPKGEQGA--SGE 683
>AL080275-2|CAI19589.1| 448|Homo sapiens collagen type IX alpha 1
protein.
Length = 448
Score = 30.7 bits (66), Expect = 5.8
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGE 371
G PGL D GV+G+ GPKG+ G SGE
Sbjct: 412 GPPGLPGMKGDRGVVGEPGPKGEQGA--SGE 440
>AL080275-1|CAO03651.1| 227|Homo sapiens collagen type IX alpha 1
protein.
Length = 227
Score = 30.7 bits (66), Expect = 5.8
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGE 371
G PGL D GV+G+ GPKG+ G SGE
Sbjct: 118 GPPGLPGMKGDRGVVGEPGPKGEQGA--SGE 146
>AF036130-2|AAC33528.1| 678|Homo sapiens collagen type IX alpha I
chain, short form protein.
Length = 678
Score = 30.7 bits (66), Expect = 5.8
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGE 371
G PGL D GV+G+ GPKG+ G SGE
Sbjct: 412 GPPGLPGMKGDRGVVGEPGPKGEQGA--SGE 440
>AF036130-1|AAC33527.1| 921|Homo sapiens collagen type IX alpha I
chain, long form protein.
Length = 921
Score = 30.7 bits (66), Expect = 5.8
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPGIEFSGE 371
G PGL D GV+G+ GPKG+ G SGE
Sbjct: 655 GPPGLPGMKGDRGVVGEPGPKGEQGA--SGE 683
>X52022-1|CAA36267.1| 3176|Homo sapiens collagen type VI, alpha 3
chain protein.
Length = 3176
Score = 30.3 bits (65), Expect = 7.7
Identities = 25/71 (35%), Positives = 29/71 (40%)
Frame = -3
Query: 598 ESGDAGRDLVSGEPVGDFVDPLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPTSLDLGVL 419
E+GD GRD V E G G GP N G+PGL T+ G+
Sbjct: 2292 ETGDDGRDGVGSEGRRGKKGERGFPGYPGPKG-----------NPGEPGLNGTTGPKGIR 2340
Query: 418 GDLGPKGDPGI 386
G G G PGI
Sbjct: 2341 GRRGNSGPPGI 2351
>M95610-1|AAA80977.1| 675|Homo sapiens alpha-2 IX collagen protein.
Length = 675
Score = 30.3 bits (65), Expect = 7.7
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Frame = -3
Query: 598 ESGDAGRDLVSGEPVGDFVD-------PLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPT 440
E G AG D G+P D + P+G+ GV G + GL G PG P
Sbjct: 53 EPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPGFAGPPG-PPG 111
Query: 439 SLDL-GVLGDLGPKGDPG 389
+ L G +G GPKGDPG
Sbjct: 112 PVGLPGEIGIRGPKGDPG 129
>M69008-1|AAA52754.1| 623|Homo sapiens alpha-1 type XIII collagen
protein.
Length = 623
Score = 30.3 bits (65), Expect = 7.7
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -3
Query: 466 VGDPGLEPTSLDLGVLGDLGPKGDPGIE 383
+G PGL G+ G GPKGDPGI+
Sbjct: 191 LGHPGLPGPMGPPGLPGPPGPKGDPGIQ 218
>M59217-1|AAA51685.1| 584|Homo sapiens alpha-1 type XIII collagen
protein.
Length = 584
Score = 30.3 bits (65), Expect = 7.7
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -3
Query: 466 VGDPGLEPTSLDLGVLGDLGPKGDPGIE 383
+G PGL G+ G GPKGDPGI+
Sbjct: 179 LGHPGLPGPMGPPGLPGPPGPKGDPGIQ 206
>BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1622
Score = 30.3 bits (65), Expect = 7.7
Identities = 32/82 (39%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPG-IEFSGELISE*APLMFPGELAPRC*LDVGCKGDC 287
G PG G GD GPKG+PG + F G+ P PGE PR G KGD
Sbjct: 1129 GQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDP----GP---PGEGGPRG--QDGAKGD- 1178
Query: 286 D*LSGEGECG-PHEPPDRGE*G 224
+GE G P P GE G
Sbjct: 1179 --RGEDGEPGQPGSPGPTGENG 1198
>BC117226-1|AAI17227.1| 345|Homo sapiens forkhead box L1 protein.
Length = 345
Score = 30.3 bits (65), Expect = 7.7
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 390 PGSPLGPKSPSTPKSSD 440
PGSPL P S S+PKSSD
Sbjct: 240 PGSPLRPASRSSPKSSD 256
>BC115363-1|AAI15364.1| 799|Homo sapiens ARHGAP12 protein protein.
Length = 799
Score = 30.3 bits (65), Expect = 7.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 360 SDINSPENSMPGSPLGPKSPSTPKSSDVGSNP 455
+D SP S P P SPS+PK D S+P
Sbjct: 383 NDKESPTASKPCFPENESSPSSPKHQDTASSP 414
>BC115362-1|AAI15363.1| 799|Homo sapiens ARHGAP12 protein protein.
Length = 799
Score = 30.3 bits (65), Expect = 7.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 360 SDINSPENSMPGSPLGPKSPSTPKSSDVGSNP 455
+D SP S P P SPS+PK D S+P
Sbjct: 383 NDKESPTASKPCFPENESSPSSPKHQDTASSP 414
>BC100027-1|AAI00028.1| 345|Homo sapiens forkhead box L1 protein.
Length = 345
Score = 30.3 bits (65), Expect = 7.7
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 390 PGSPLGPKSPSTPKSSD 440
PGSPL P S S+PKSSD
Sbjct: 240 PGSPLRPASRSSPKSSD 256
>BC033174-1|AAH33174.1| 979|Homo sapiens Similar to collagen, type
VI, alpha 3 protein.
Length = 979
Score = 30.3 bits (65), Expect = 7.7
Identities = 25/71 (35%), Positives = 29/71 (40%)
Frame = -3
Query: 598 ESGDAGRDLVSGEPVGDFVDPLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPTSLDLGVL 419
E+GD GRD V E G G GP N G+PGL T+ G+
Sbjct: 94 ETGDDGRDGVGSEGRRGKKGERGFPGYPGPKG-----------NPGEPGLNGTTGPKGIR 142
Query: 418 GDLGPKGDPGI 386
G G G PGI
Sbjct: 143 GRRGNSGPPGI 153
>AY033595-1|AAK52312.1| 846|Homo sapiens rho-GAP domain containing
protein ARHGAP12b protein.
Length = 846
Score = 30.3 bits (65), Expect = 7.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 360 SDINSPENSMPGSPLGPKSPSTPKSSDVGSNP 455
+D SP S P P SPS+PK D S+P
Sbjct: 430 NDKESPTASKPCFPENESSPSSPKHQDTASSP 461
>AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 30.3 bits (65), Expect = 7.7
Identities = 32/82 (39%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPG-IEFSGELISE*APLMFPGELAPRC*LDVGCKGDC 287
G PG G GD GPKG+PG + F G+ P PGE PR G KGD
Sbjct: 1157 GQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDP----GP---PGEGGPRG--QDGAKGD- 1206
Query: 286 D*LSGEGECG-PHEPPDRGE*G 224
+GE G P P GE G
Sbjct: 1207 --RGEDGEPGQPGSPGPTGENG 1226
>AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 30.3 bits (65), Expect = 7.7
Identities = 32/82 (39%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPG-IEFSGELISE*APLMFPGELAPRC*LDVGCKGDC 287
G PG G GD GPKG+PG + F G+ P PGE PR G KGD
Sbjct: 1157 GQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDP----GP---PGEGGPRG--QDGAKGD- 1206
Query: 286 D*LSGEGECG-PHEPPDRGE*G 224
+GE G P P GE G
Sbjct: 1207 --RGEDGEPGQPGSPGPTGENG 1226
>AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 30.3 bits (65), Expect = 7.7
Identities = 32/82 (39%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPG-IEFSGELISE*APLMFPGELAPRC*LDVGCKGDC 287
G PG G GD GPKG+PG + F G+ P PGE PR G KGD
Sbjct: 1157 GQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDP----GP---PGEGGPRG--QDGAKGD- 1206
Query: 286 D*LSGEGECG-PHEPPDRGE*G 224
+GE G P P GE G
Sbjct: 1207 --RGEDGEPGQPGSPGPTGENG 1226
>AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 30.3 bits (65), Expect = 7.7
Identities = 32/82 (39%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPG-IEFSGELISE*APLMFPGELAPRC*LDVGCKGDC 287
G PG G GD GPKG+PG + F G+ P PGE PR G KGD
Sbjct: 1157 GQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDP----GP---PGEGGPRG--QDGAKGD- 1206
Query: 286 D*LSGEGECG-PHEPPDRGE*G 224
+GE G P P GE G
Sbjct: 1207 --RGEDGEPGQPGSPGPTGENG 1226
>AL390715-4|CAI12372.1| 846|Homo sapiens Rho GTPase activating
protein 12 protein.
Length = 846
Score = 30.3 bits (65), Expect = 7.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 360 SDINSPENSMPGSPLGPKSPSTPKSSDVGSNP 455
+D SP S P P SPS+PK D S+P
Sbjct: 430 NDKESPTASKPCFPENESSPSSPKHQDTASSP 461
>AL138925-3|CAI15452.1| 683|Homo sapiens collagen type XIII alpha 1
protein.
Length = 683
Score = 30.3 bits (65), Expect = 7.7
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -3
Query: 466 VGDPGLEPTSLDLGVLGDLGPKGDPGIE 383
+G PGL G+ G GPKGDPGI+
Sbjct: 262 LGHPGLPGPMGPPGLPGPPGPKGDPGIQ 289
>AL138925-2|CAI15451.2| 695|Homo sapiens collagen type XIII alpha 1
protein.
Length = 695
Score = 30.3 bits (65), Expect = 7.7
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -3
Query: 466 VGDPGLEPTSLDLGVLGDLGPKGDPGIE 383
+G PGL G+ G GPKGDPGI+
Sbjct: 262 LGHPGLPGPMGPPGLPGPPGPKGDPGIQ 289
>AL138925-1|CAI15450.1| 717|Homo sapiens collagen type XIII alpha 1
protein.
Length = 717
Score = 30.3 bits (65), Expect = 7.7
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -3
Query: 466 VGDPGLEPTSLDLGVLGDLGPKGDPGIE 383
+G PGL G+ G GPKGDPGI+
Sbjct: 284 LGHPGLPGPMGPPGLPGPPGPKGDPGIQ 311
>AL050341-7|CAI20433.1| 83|Homo sapiens collagen type IX alpha 2
protein.
Length = 83
Score = 30.3 bits (65), Expect = 7.7
Identities = 22/62 (35%), Positives = 27/62 (43%)
Frame = -3
Query: 427 GVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDCD*LSGEGECGPHE 248
G G GP G PG+ S + P+ PGE+ R G KGD +G GP
Sbjct: 30 GERGPPGPPGPPGVPGSDGIDGPPGPVGLPGEIGIR-----GPKGD---PGPDGPSGPPG 81
Query: 247 PP 242
PP
Sbjct: 82 PP 83
>AL050341-6|CAB81611.1| 689|Homo sapiens collagen type IX alpha 2
protein.
Length = 689
Score = 30.3 bits (65), Expect = 7.7
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Frame = -3
Query: 598 ESGDAGRDLVSGEPVGDFVD-------PLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPT 440
E G AG D G+P D + P+G+ GV G + GL G PG P
Sbjct: 67 EPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPGFAGPPG-PPG 125
Query: 439 SLDL-GVLGDLGPKGDPG 389
+ L G +G GPKGDPG
Sbjct: 126 PVGLPGEIGIRGPKGDPG 143
>AL050341-5|CAI20432.1| 225|Homo sapiens collagen type IX alpha 2
protein.
Length = 225
Score = 30.3 bits (65), Expect = 7.7
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Frame = -3
Query: 598 ESGDAGRDLVSGEPVGDFVD-------PLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPT 440
E G AG D G+P D + P+G+ GV G + GL G PG P
Sbjct: 55 EPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPGFAGPPG-PPG 113
Query: 439 SLDL-GVLGDLGPKGDPG 389
+ L G +G GPKGDPG
Sbjct: 114 PVGLPGEIGIRGPKGDPG 131
>AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha 2
protein.
Length = 1736
Score = 30.3 bits (65), Expect = 7.7
Identities = 32/82 (39%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPG-IEFSGELISE*APLMFPGELAPRC*LDVGCKGDC 287
G PG G GD GPKG+PG + F G+ P PGE PR G KGD
Sbjct: 1243 GQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDP----GP---PGEGGPRG--QDGAKGD- 1292
Query: 286 D*LSGEGECG-PHEPPDRGE*G 224
+GE G P P GE G
Sbjct: 1293 --RGEDGEPGQPGSPGPTGENG 1312
>AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 30.3 bits (65), Expect = 7.7
Identities = 32/82 (39%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = -3
Query: 463 GDPGLEPTSLDLGVLGDLGPKGDPG-IEFSGELISE*APLMFPGELAPRC*LDVGCKGDC 287
G PG G GD GPKG+PG + F G+ P PGE PR G KGD
Sbjct: 1157 GQPGEPGPPGPKGPTGDDGPKGNPGPVGFPGDP----GP---PGEGGPRG--QDGAKGD- 1206
Query: 286 D*LSGEGECG-PHEPPDRGE*G 224
+GE G P P GE G
Sbjct: 1207 --RGEDGEPGQPGSPGPTGENG 1226
>AJ293624-1|CAC00688.1| 717|Homo sapiens type XIII collagen
protein.
Length = 717
Score = 30.3 bits (65), Expect = 7.7
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -3
Query: 466 VGDPGLEPTSLDLGVLGDLGPKGDPGIE 383
+G PGL G+ G GPKGDPGI+
Sbjct: 284 LGHPGLPGPMGPPGLPGPPGPKGDPGIQ 311
>AF315075-1|AAG40312.1| 345|Homo sapiens forkhead family
transcription factor FOXL1 protein.
Length = 345
Score = 30.3 bits (65), Expect = 7.7
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +3
Query: 390 PGSPLGPKSPSTPKSSD 440
PGSPL P S S+PKSSD
Sbjct: 240 PGSPLRPASRSSPKSSD 256
>AF177941-1|AAF59902.1| 1745|Homo sapiens collagen type V alpha 3
chain protein.
Length = 1745
Score = 30.3 bits (65), Expect = 7.7
Identities = 24/75 (32%), Positives = 32/75 (42%)
Frame = -3
Query: 466 VGDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDC 287
VG+PGL +G G LGP G PG++ E + G + P + G KGD
Sbjct: 1366 VGEPGLLGAPGQMGPPGPLGPSGLPGLKGDTGPKGEKGHIGLIGLIGPPG--EAGEKGDQ 1423
Query: 286 D*LSGEGECGPHEPP 242
+G GP P
Sbjct: 1424 GLPGVQGPPGPKGDP 1438
>AF019406-1|AAC33512.1| 689|Homo sapiens collagen type IX alpha 2
chain protein.
Length = 689
Score = 30.3 bits (65), Expect = 7.7
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Frame = -3
Query: 598 ESGDAGRDLVSGEPVGDFVD-------PLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPT 440
E G AG D G+P D + P+G+ GV G + GL G PG P
Sbjct: 67 EPGKAGPDGPDGKPGIDGLTGAKGEPGPMGIPGVKGQPGLPGPPGLPGPGFAGPPG-PPG 125
Query: 439 SLDL-GVLGDLGPKGDPG 389
+ L G +G GPKGDPG
Sbjct: 126 PVGLPGEIGIRGPKGDPG 143
>AC112721-1|AAY24135.1| 2588|Homo sapiens unknown protein.
Length = 2588
Score = 30.3 bits (65), Expect = 7.7
Identities = 25/71 (35%), Positives = 29/71 (40%)
Frame = -3
Query: 598 ESGDAGRDLVSGEPVGDFVDPLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPTSLDLGVL 419
E+GD GRD V E G G GP N G+PGL T+ G+
Sbjct: 2292 ETGDDGRDGVGSEGRRGKKGERGFPGYPGPKG-----------NPGEPGLNGTTGPKGIR 2340
Query: 418 GDLGPKGDPGI 386
G G G PGI
Sbjct: 2341 GRRGNSGPPGI 2351
>AB209645-1|BAD92882.1| 1027|Homo sapiens alpha 1 type VII collagen
precursor variant protein.
Length = 1027
Score = 30.3 bits (65), Expect = 7.7
Identities = 25/71 (35%), Positives = 30/71 (42%)
Frame = -3
Query: 598 ESGDAGRDLVSGEPVGDFVDPLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPTSLDLGVL 419
E G+ GRD G P G G GP + G G PGL+ + G
Sbjct: 707 ERGEQGRDGPPGLP-----GTPGPPGPPGPKVSVDEPGPGLSGEQGPPGLKGAKGEPGSN 761
Query: 418 GDLGPKGDPGI 386
GD GPKGD G+
Sbjct: 762 GDQGPKGDRGV 772
>AB209636-1|BAD92873.1| 1702|Homo sapiens alpha 3 type VI collagen
isoform 5 precursor variant protein.
Length = 1702
Score = 30.3 bits (65), Expect = 7.7
Identities = 25/71 (35%), Positives = 29/71 (40%)
Frame = -3
Query: 598 ESGDAGRDLVSGEPVGDFVDPLGLCGVFGPSFILLGTGLYC*VNVGDPGLEPTSLDLGVL 419
E+GD GRD V E G G GP N G+PGL T+ G+
Sbjct: 817 ETGDDGRDGVGSEGRRGKKGERGFPGYPGPKG-----------NPGEPGLNGTTGPKGIR 865
Query: 418 GDLGPKGDPGI 386
G G G PGI
Sbjct: 866 GRRGNSGPPGI 876
>AB209175-1|BAD92412.1| 1658|Homo sapiens collagen, type V, alpha 3
preproprotein variant protein.
Length = 1658
Score = 30.3 bits (65), Expect = 7.7
Identities = 24/75 (32%), Positives = 32/75 (42%)
Frame = -3
Query: 466 VGDPGLEPTSLDLGVLGDLGPKGDPGIEFSGELISE*APLMFPGELAPRC*LDVGCKGDC 287
VG+PGL +G G LGP G PG++ E + G + P + G KGD
Sbjct: 1279 VGEPGLLGAPGQMGPPGPLGPSGLPGLKGDTGPKGEKGHIGLIGLIGPPG--EAGEKGDQ 1336
Query: 286 D*LSGEGECGPHEPP 242
+G GP P
Sbjct: 1337 GLPGVQGPPGPKGDP 1351
>AB058761-1|BAB47487.2| 2469|Homo sapiens KIAA1858 protein protein.
Length = 2469
Score = 30.3 bits (65), Expect = 7.7
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +3
Query: 318 HRGASSPGNMSGAHSDINSPENSM----PGSPLGPKSPSTPKSSDVGSNPGSPTFT 473
HRG S G +G+ D E PG P++ STP + D + P S + T
Sbjct: 1755 HRGKRSAGKAAGSPGDPWGQEGEAKKDSPGERAKPRARSTPSNPDGAATPDSASAT 1810
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,600,513
Number of Sequences: 237096
Number of extensions: 1746437
Number of successful extensions: 13417
Number of sequences better than 10.0: 131
Number of HSP's better than 10.0 without gapping: 6770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12638
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -