Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0157
(750 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 38 0.009
At4g27520.1 68417.m03952 plastocyanin-like domain-containing pro... 34 0.088
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 33 0.20
At1g64450.1 68414.m07306 proline-rich family protein contains pr... 33 0.20
At1g79480.1 68414.m09263 hypothetical protein low similarity to ... 32 0.35
At2g28440.1 68415.m03455 proline-rich family protein contains pr... 31 0.82
At1g28330.3 68414.m03480 dormancy-associated protein, putative (... 31 0.82
At1g28330.2 68414.m03479 dormancy-associated protein, putative (... 31 0.82
At1g28330.1 68414.m03478 dormancy-associated protein, putative (... 31 0.82
At2g19330.1 68415.m02255 leucine-rich repeat family protein cont... 30 1.4
At2g43800.1 68415.m05445 formin homology 2 domain-containing pro... 30 1.9
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 30 1.9
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 30 1.9
At3g44340.1 68416.m04764 sec23/sec24 transport family protein co... 29 2.5
At2g18470.1 68415.m02151 protein kinase family protein contains ... 29 2.5
At3g24550.1 68416.m03083 protein kinase family protein contains ... 28 5.8
At3g24860.1 68416.m03118 hydroxyproline-rich glycoprotein family... 28 7.6
At2g16470.1 68415.m01887 zinc finger (CCCH-type) family protein ... 28 7.6
At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to b... 28 7.6
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 37.5 bits (83), Expect = 0.009
Identities = 26/61 (42%), Positives = 33/61 (54%)
Frame = +3
Query: 318 HRGASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPN 497
H A +P + S AH+ +SP +S SP PKSPS P SS S P +P+ SP P
Sbjct: 247 HSPAHAPSH-SPAHAPSHSPAHSPSHSPATPKSPS-PSSSPAQS-PATPSPMTPQSPSPV 303
Query: 498 S 500
S
Sbjct: 304 S 304
>At4g27520.1 68417.m03952 plastocyanin-like domain-containing
protein similar to PIR|JC7196 phytocyanin-related
protein Pn14 {Ipomoea nil}; contains Pfam profile
PF02298: Plastocyanin-like domain
Length = 349
Score = 34.3 bits (75), Expect = 0.088
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Frame = +3
Query: 324 GASSPGNMS---GAHSDINS----PENSMPGSPLGPKSPSTPKSSDVGSNPGSP 464
G+S+PG+M+ GAHS +S P S PGS P +PKSS S SP
Sbjct: 146 GSSTPGSMTPPGGAHSPKSSSPVSPTTSPPGSTTPPGGAHSPKSSSAVSPATSP 199
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 33.1 bits (72), Expect = 0.20
Identities = 20/56 (35%), Positives = 26/56 (46%)
Frame = +3
Query: 333 SPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPNS 500
SPG + S + SP ++ P P SP+TP GS P SPT P+S
Sbjct: 444 SPGGSPPSPSIVPSPPSTTPSPGSPPTSPTTPTPG--GSPPSSPTTPTPGGSPPSS 497
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +3
Query: 333 SPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVP 494
+PG + +P S P SP P +P SS +PG + SP P
Sbjct: 476 TPGGSPPSSPTTPTPGGSPPSSPTTPTPGGSPPSSPTTPSPGGSPPSPSISPSP 529
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +3
Query: 324 GASSPGNMSGAHSDINSPENSMPGSP--LGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPN 497
G S P + + + P S+ SP P PSTP S +P SPT SP+P+
Sbjct: 504 GGSPPSSPTTPSPGGSPPSPSISPSPPITVPSPPSTPTSPGSPPSPSSPT---PSSPIPS 560
>At1g64450.1 68414.m07306 proline-rich family protein contains
proline rich extensins, INTERPRO:IPR0002965
Length = 342
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = +3
Query: 336 PGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTF 470
PGN N S P +P P+ P P + + NPGSP F
Sbjct: 178 PGNPGSPDFSGNPGPPSFPRNPGSPEFPGNPGAPIIPRNPGSPEF 222
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 390 PGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSP 488
P +P P P P+S D+ NPGSP F+ P
Sbjct: 160 PRNPDSPYFPGYPESPDLPGNPGSPDFSGNPGP 192
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 390 PGSPLGPKSPSTPKSSDVGSNPGSPTF 470
PG P P P P S D NPG P+F
Sbjct: 169 PGYPESPDLPGNPGSPDFSGNPGPPSF 195
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 336 PGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTF 470
P N IN P N PG+P+ P++P+ P + G P F
Sbjct: 214 PRNPGSPEFPINPPRN--PGAPVIPRNPNPPVFPGNPRSMGPPGF 256
>At1g79480.1 68414.m09263 hypothetical protein low similarity to
beta-1,3-glucanase-like protein GI:9758115 from
[Arabidopsis thaliana]
Length = 356
Score = 32.3 bits (70), Expect = 0.35
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Frame = +3
Query: 336 PGNMSGAHSDINSPENSM-PGSPLG----PKSPSTPKSSDVGSNPGSPTFTQQYSPVPNS 500
P + S +S+ N PE+S P P+ P+S S P + SNP +P T Y P +S
Sbjct: 141 PDSSSNPNSNPNPPESSSNPNPPVTVPNPPESSSNPNPPESSSNP-NPPITIPYPPESSS 199
Query: 501 MN 506
N
Sbjct: 200 PN 201
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/57 (35%), Positives = 25/57 (43%)
Frame = +3
Query: 327 ASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPN 497
+SS N + S+ NS N P P+S S P D SNP S + S PN
Sbjct: 105 SSSNPNPPDSSSNPNSNPNPPVTVPNPPESSSNPNPPDSSSNPNSNPNPPESSSNPN 161
>At2g28440.1 68415.m03455 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains similarity to vegetative cell wall protein gp1
[Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420; +
Length = 268
Score = 31.1 bits (67), Expect = 0.82
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 342 NMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFT-QQYSPVPNS 500
+ +GA + SP PG SP +P SS +P SP+ + ++ SP+P S
Sbjct: 19 DFAGAQEESPSPAAVSPGREPSTDSPLSPSSSPEEDSPLSPSSSPEEDSPLPPS 72
>At1g28330.3 68414.m03480 dormancy-associated protein, putative
(DRM1) identical to dormancy-associated protein
[Arabidopsis thaliana] GI:2995990; similar to
dormancy-associated protein GI:2605887 from [Pisum
sativum]; contains Pfam profile PF05564: Dormancy/auxin
associated protein
Length = 132
Score = 31.1 bits (67), Expect = 0.82
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +3
Query: 357 HSDINSPENSMPGSPLGPKSPSTPKSSDVGS---NPGSPTFTQ 476
H + P PG+P P +P+TP+ +V NPGS T+
Sbjct: 48 HRSLTMPAAVSPGTPTTPTTPTTPRKDNVWRSVFNPGSNLATR 90
>At1g28330.2 68414.m03479 dormancy-associated protein, putative
(DRM1) identical to dormancy-associated protein
[Arabidopsis thaliana] GI:2995990; similar to
dormancy-associated protein GI:2605887 from [Pisum
sativum]; contains Pfam profile PF05564: Dormancy/auxin
associated protein
Length = 132
Score = 31.1 bits (67), Expect = 0.82
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +3
Query: 357 HSDINSPENSMPGSPLGPKSPSTPKSSDVGS---NPGSPTFTQ 476
H + P PG+P P +P+TP+ +V NPGS T+
Sbjct: 48 HRSLTMPAAVSPGTPTTPTTPTTPRKDNVWRSVFNPGSNLATR 90
>At1g28330.1 68414.m03478 dormancy-associated protein, putative
(DRM1) identical to dormancy-associated protein
[Arabidopsis thaliana] GI:2995990; similar to
dormancy-associated protein GI:2605887 from [Pisum
sativum]; contains Pfam profile PF05564: Dormancy/auxin
associated protein
Length = 122
Score = 31.1 bits (67), Expect = 0.82
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +3
Query: 357 HSDINSPENSMPGSPLGPKSPSTPKSSDVGS---NPGSPTFTQ 476
H + P PG+P P +P+TP+ +V NPGS T+
Sbjct: 48 HRSLTMPAAVSPGTPTTPTTPTTPRKDNVWRSVFNPGSNLATR 90
>At2g19330.1 68415.m02255 leucine-rich repeat family protein
contains leucine rich repeats, Pfam:PF00560
Length = 380
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 357 HSDINSPENSMPGSPLGPKSPSTPKSSDVGSN 452
H SP +S P SP P SPS+PKS +N
Sbjct: 27 HQRKRSPLSS-PSSPSSPSSPSSPKSPSFNNN 57
>At2g43800.1 68415.m05445 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 894
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 318 HRGASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKS--SDVGSNPGSP 464
+R + G+ S + ++ N+ PG+ L PKS S P S S + SN G P
Sbjct: 351 NRSINGSGSNSCSPTNFAPSLNASPGTSLKPKSISPPVSLHSQISSNNGIP 401
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +3
Query: 348 SGAHSD--INSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPNS 500
SG+H ++P +S GSP SPSTP S+ +P+ T ++P P++
Sbjct: 42 SGSHGTPPSHTPPSSNCGSPPYDPSPSTPSHPSPPSHTPTPS-TPSHTPTPHT 93
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +3
Query: 348 SGAHSD--INSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPNS 500
SG+H ++P +S GSP SPSTP S+ +P+ T ++P P++
Sbjct: 42 SGSHGTPPSHTPPSSNCGSPPYDPSPSTPSHPSPPSHTPTPS-TPSHTPTPHT 93
>At3g44340.1 68416.m04764 sec23/sec24 transport family protein
contains Pfam domains PF04811: Sec23/Sec24 trunk domain,
PF04815: Sec23/Sec24 helical domain and PF04810:
Sec23/Sec24 zinc finger
Length = 1096
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +3
Query: 336 PGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFT 473
P M G H P + MPG PL P P G+ P FT
Sbjct: 198 PSGMHGGHLSNGPPPSGMPGGPLSNGPP--PPMMGPGAFPRGSQFT 241
>At2g18470.1 68415.m02151 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 633
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPNSMN 506
SSP S +S +SP P SP P+ S+ ++P +P Q +P PNS N
Sbjct: 15 SSPSPPSNTNSTTSSPPAPSPPSPTPPQGDSSSSPPPDSTSPPAP---QAPNP-PNSSN 69
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 28.3 bits (60), Expect = 5.8
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +3
Query: 327 ASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPNS 500
A SPG + + S + P NS +P P + S P ++ S P SP+ T SP P+S
Sbjct: 4 APSPGT-TPSPSPPSPPTNSTTTTP-PPAASSPPPTTTPSSPPPSPS-TNSTSPPPSS 58
>At3g24860.1 68416.m03118 hydroxyproline-rich glycoprotein family
protein contains proline-rich domains,
INTERPRO:IPR000694
Length = 310
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 330 SSPGNMSGAHSDINSPENSMPGSPLGPKSPSTP 428
SSP + S +S P P SP P +PS+P
Sbjct: 8 SSPPSDSNPNSAATPPHQKQPPSPPQPTNPSSP 40
>At2g16470.1 68415.m01887 zinc finger (CCCH-type) family protein /
GYF domain-containing protein contains Pfam domains
PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and
similar), PF02213: GYF domain
Length = 659
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = +3
Query: 324 GASSPGNMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPNSM 503
G S G+M H N+P + + G SPS S S PG P VP+
Sbjct: 401 GKQSWGSMQTDHGGSNTPSSQNNSTSYGTPSPSVLPSQ---SQPGFPPSDSWKVAVPSQP 457
Query: 504 N 506
N
Sbjct: 458 N 458
>At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to
beta-1,3-glucanase-like protein (GI:14279169) [Olea
europaea] similar to Glucan endo-1,3-beta-glucosidase
precursor (EC 3.2.1.39) ((1-3)-beta- glucan
endohydrolase) ((1-3)-beta-glucanase) (Beta-1,3-
endoglucanase) (Swiss-Prot:P52409) [Triticum aestivum]
Length = 197
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 327 ASSPG--NMSGAHSDINSPENSMPGSPLGPKSPSTPKSSDVGSNPGSPTFTQQYSPVPNS 500
A PG N SG + +P +++ + P SPS+ +S + P T T +P P +
Sbjct: 78 AQVPGSCNFSGTATTNPNPPSNLANGCIYPSSPSSTRSPPSTTPPTGTTPTNGTTPFPGT 137
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,214,192
Number of Sequences: 28952
Number of extensions: 232010
Number of successful extensions: 883
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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