Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0155
(671 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical pr... 287 5e-78
D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1 pr... 282 2e-76
U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical p... 254 6e-68
U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical p... 254 6e-68
D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2 pr... 254 6e-68
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 32 0.32
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 32 0.32
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 29 3.0
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 29 4.0
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 29 4.0
AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical ... 29 4.0
AL132952-11|CAB61148.1| 136|Caenorhabditis elegans Hypothetical... 28 5.3
AF098985-1|AAC67419.2| 882|Caenorhabditis elegans Hypothetical ... 28 5.3
AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical ... 28 5.3
Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical pr... 28 6.9
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 6.9
Z68301-8|CAA92626.2| 484|Caenorhabditis elegans Hypothetical pr... 27 9.2
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 27 9.2
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical
protein T05D4.1 protein.
Length = 365
Score = 287 bits (704), Expect = 5e-78
Identities = 137/203 (67%), Positives = 162/203 (79%)
Frame = +2
Query: 5 QYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFS 184
Q+ T ++EL+ IA AIV P KGILAADESTG+M KRL IG+ENTEENRR+YRQLLF+
Sbjct: 6 QFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYRQLLFT 65
Query: 185 SDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTT 364
+ A L++ ISGVI+FHET YQK DDG P +LL+++GIIPGIKVDKGVVP+ G+ E TT
Sbjct: 66 AGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTIGEGTT 125
Query: 365 QGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVP 544
QGLDDL RCAQYKKDG FAKWRCV KI TPS A++E A+ LARYASICQ +VP
Sbjct: 126 QGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIASNLARYASICQQNGLVP 185
Query: 545 IVEPEVLPDGEHDLDRAQKVTES 613
IVEPE+LPDGEH L R QK+TE+
Sbjct: 186 IVEPEILPDGEHCLARGQKITET 208
Score = 34.7 bits (76), Expect = 0.061
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1
Query: 613 VLAAVYKALNDHHVYLEGT 669
VL+ VY ALN+HHV+LEGT
Sbjct: 209 VLSYVYHALNEHHVFLEGT 227
>D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1
protein.
Length = 366
Score = 282 bits (691), Expect = 2e-76
Identities = 136/204 (66%), Positives = 162/204 (79%), Gaps = 1/204 (0%)
Frame = +2
Query: 5 QYPTPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFS 184
Q+ T ++EL+ IA AIV P KGILAADESTG+M KRL IG+ENTEENRR+YRQLLF+
Sbjct: 6 QFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYRQLLFT 65
Query: 185 SDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTT 364
+ A L++ ISGVI+FHET YQK DDG P +LL+++GIIPGIKVDKGVVP+ G+ E TT
Sbjct: 66 AGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTIGEGTT 125
Query: 365 QGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENA-NVLARYASICQSQRIV 541
QGLDDL RCAQYKKDG FAKWRCV KI TPS A++E A N+ +RYASICQ +V
Sbjct: 126 QGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIASNLGSRYASICQQNGLV 185
Query: 542 PIVEPEVLPDGEHDLDRAQKVTES 613
PIVEPE+LPDGEH L R QK+TE+
Sbjct: 186 PIVEPEILPDGEHCLARGQKITET 209
Score = 34.7 bits (76), Expect = 0.061
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1
Query: 613 VLAAVYKALNDHHVYLEGT 669
VL+ VY ALN+HHV+LEGT
Sbjct: 210 VLSYVYHALNEHHVFLEGT 228
>U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical
protein F01F1.12a protein.
Length = 366
Score = 254 bits (621), Expect = 6e-68
Identities = 127/199 (63%), Positives = 152/199 (76%)
Frame = +2
Query: 14 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 193
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 194 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 373
L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGL
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 374 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVE 553
D LA+R A +KK GC FAKWRCVL IG +TPS+ + ENANVLARYASICQ+ +VPIVE
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENANVLARYASICQANGLVPIVE 191
Query: 554 PEVLPDGEHDLDRAQKVTE 610
PEVL DGEHDL RAQKVTE
Sbjct: 192 PEVLCDGEHDLARAQKVTE 210
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +1
Query: 613 VLAAVYKALNDHHVYLEGT 669
VLA VYKAL DHHVYLEGT
Sbjct: 212 VLAFVYKALADHHVYLEGT 230
>U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical
protein F01F1.12b protein.
Length = 259
Score = 254 bits (621), Expect = 6e-68
Identities = 127/199 (63%), Positives = 152/199 (76%)
Frame = +2
Query: 14 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 193
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 194 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 373
L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGL
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 374 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVE 553
D LA+R A +KK GC FAKWRCVL IG +TPS+ + ENANVLARYASICQ+ +VPIVE
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENANVLARYASICQANGLVPIVE 191
Query: 554 PEVLPDGEHDLDRAQKVTE 610
PEVL DGEHDL RAQKVTE
Sbjct: 192 PEVLCDGEHDLARAQKVTE 210
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +1
Query: 613 VLAAVYKALNDHHVYLEGT 669
VLA VYKAL DHHVYLEGT
Sbjct: 212 VLAFVYKALADHHVYLEGT 230
>D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2
protein.
Length = 366
Score = 254 bits (621), Expect = 6e-68
Identities = 127/199 (63%), Positives = 152/199 (76%)
Frame = +2
Query: 14 TPELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 193
T ++EL +IA IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 194 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 373
L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGL
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 374 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVE 553
D LA+R A +KK GC FAKWRCVL IG +TPS+ + ENANVLARYASICQ+ +VPIVE
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENANVLARYASICQANGLVPIVE 191
Query: 554 PEVLPDGEHDLDRAQKVTE 610
PEVL DGEHDL RAQKVTE
Sbjct: 192 PEVLCDGEHDLARAQKVTE 210
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +1
Query: 613 VLAAVYKALNDHHVYLEGT 669
VLA VYKAL DHHVYLEGT
Sbjct: 212 VLAFVYKALADHHVYLEGT 230
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 32.3 bits (70), Expect = 0.32
Identities = 37/151 (24%), Positives = 60/151 (39%)
Frame = +1
Query: 133 RGEHRGEPSSLSPTAIQL*RCALREHLWCDPVPRDPLPEG*RWNPSGLPAGEEGHHPRHQ 312
+G R + ++ PTA Q+ + + + VPR P P +PS + G HP Q
Sbjct: 140 QGASREQGNAHQPTAGQIPQSSNQPAQQTHNVPRMPQPLQQVPHPSPV----RGSHPAAQ 195
Query: 313 GRQGCRPAVRIGRRMHHPGSGRPRPALRPVQEGRLPLRQVALRAEDWPQHPLVPSYPGKR 492
Q RI + + P P ++ V+ + Q+ +A P + P R
Sbjct: 196 QVQNAPQ--RIPQHVPMPQGVAPHQVIQQVRAPNIGASQMVQQA---PSRGHTGAAPASR 250
Query: 493 QCSRPLRLHLSEPTHRANCRARSLT*WRARP 585
+P+ LH H+A + T R RP
Sbjct: 251 MAQQPVPLHQGVAPHQAAPQTIQQTPARGRP 281
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 32.3 bits (70), Expect = 0.32
Identities = 37/151 (24%), Positives = 60/151 (39%)
Frame = +1
Query: 133 RGEHRGEPSSLSPTAIQL*RCALREHLWCDPVPRDPLPEG*RWNPSGLPAGEEGHHPRHQ 312
+G R + ++ PTA Q+ + + + VPR P P +PS + G HP Q
Sbjct: 140 QGASREQGNAHQPTAGQIPQSSNQPAQQTHNVPRMPQPLQQVPHPSPV----RGSHPAAQ 195
Query: 313 GRQGCRPAVRIGRRMHHPGSGRPRPALRPVQEGRLPLRQVALRAEDWPQHPLVPSYPGKR 492
Q RI + + P P ++ V+ + Q+ +A P + P R
Sbjct: 196 QVQNAPQ--RIPQHVPMPQGVAPHQVIQQVRAPNIGASQMVQQA---PSRGHTGAAPASR 250
Query: 493 QCSRPLRLHLSEPTHRANCRARSLT*WRARP 585
+P+ LH H+A + T R RP
Sbjct: 251 MAQQPVPLHQGVAPHQAAPQTIQQTPARGRP 281
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +1
Query: 250 G*RWNPSGLPAGEEGHH--PRHQGRQGCRPAVRIGRRMHHPGSGRPRP 387
G R P P G GHH P H G P+ R G HH RP P
Sbjct: 382 GGRHGPPHCP-GRHGHHGPPHHHHHDGRSPS-RHGHHHHHHHGCRPFP 427
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +2
Query: 20 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 163
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 747 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 806
Query: 164 YRQLLFSSDA 193
Y QL+ SD+
Sbjct: 807 YEQLVSESDS 816
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +2
Query: 20 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 163
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 733 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 792
Query: 164 YRQLLFSSDA 193
Y QL+ SD+
Sbjct: 793 YEQLVSESDS 802
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 12/70 (17%)
Frame = +2
Query: 20 ELQEELKKIAQAIVAPAKGILAADESTGTMGKRLQ-------DIGV-----ENTEENRRR 163
E++E+ +K++ + + ++ T+ +L+ D+GV E TEEN +R
Sbjct: 733 EVREKNRKLSTEMAEEKSNLSKNEKQLETVNAKLKLAEDLQTDVGVIQQLYEQTEENEKR 792
Query: 164 YRQLLFSSDA 193
Y QL+ SD+
Sbjct: 793 YEQLVSESDS 802
>AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical
protein C02B10.5 protein.
Length = 698
Score = 28.7 bits (61), Expect = 4.0
Identities = 24/85 (28%), Positives = 32/85 (37%), Gaps = 3/85 (3%)
Frame = +1
Query: 226 VPRDPLPEG*RWNPSGLPAGEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRPALRP-- 399
+P +P G P G+ G G P H G QG P + M G P+P P
Sbjct: 587 MPPGMMPPG--MMPPGMHPGMAGMPPMHPGMQGMPPMHPGMQGMPGMPHGPPQPPQNPAL 644
Query: 400 -VQEGRLPLRQVALRAEDWPQHPLV 471
V R + A P HP++
Sbjct: 645 MVAGNRAGSAEAAAAQMGNPHHPMM 669
>AL132952-11|CAB61148.1| 136|Caenorhabditis elegans Hypothetical
protein Y51H4A.16 protein.
Length = 136
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +2
Query: 308 IKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQE 487
++V + V L + E T + L LAQ+ ++ +D W+C+ G +T + ++I+E
Sbjct: 22 VRVVERAVALHKNSKEKTNEKL--LAQKSGKWARDAESRNTWKCIRAPGAHTHTGESIKE 79
Query: 488 N 490
+
Sbjct: 80 S 80
>AF098985-1|AAC67419.2| 882|Caenorhabditis elegans Hypothetical
protein C08G5.1 protein.
Length = 882
Score = 28.3 bits (60), Expect = 5.3
Identities = 40/160 (25%), Positives = 63/160 (39%), Gaps = 4/160 (2%)
Frame = +2
Query: 131 GVENTEENRRRYRQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGI 310
G+EN+E + + V+ G+ + + QK D L K +I GI
Sbjct: 582 GIENSENTKTESFASIAKDSQVVGMATRGITIMEQMASQKVD-------LKPLKVLIAGI 634
Query: 311 KVD-KGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKW-RCV--LKIGRNTPSYQA 478
KV+ K V P ED + L L + KK+ F K + V K+ + +QA
Sbjct: 635 KVEMKNVDP----EDAKNLKSLYGLESELNRIKKEAGTFMKTVKPVNSTKLSDYSEIFQA 690
Query: 479 IQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQ 598
++ V ++I S I+ I P L +AQ
Sbjct: 691 VKSVKGVSMNLSAIIGSVEILKIRLPSRTRRAASGLTKAQ 730
>AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical
protein Y41D4A.8 protein.
Length = 347
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 257 DGTPLVSLLEKKGII--PGIKVDKGVVPLFGSEDECT 361
D +PLVS+L G+I P + + VPLF ED CT
Sbjct: 10 DPSPLVSVL---GLIKSPDLMIGSTEVPLFEEEDMCT 43
>Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical
protein T26E3.1 protein.
Length = 233
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = -1
Query: 437 NATWRSGSRPSCTGRSAGR---GRPDPGWCIRL 348
N G RP+ G AG RP+ GWC+R+
Sbjct: 48 NGNGNGGGRPTNGGCDAGWRRFNRPNGGWCVRV 80
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.9 bits (59), Expect = 6.9
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -3
Query: 411 SFLYWAQRWARSSRPWVVHSSSDPNSGTTPLSTLMPGMMPFFSSRETRGVPSSA 250
S L +Q +S P VV SSS +S T ST+ P +S + PS++
Sbjct: 450 STLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTS 503
>Z68301-8|CAA92626.2| 484|Caenorhabditis elegans Hypothetical
protein W01B6.3 protein.
Length = 484
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 154 PSSLSPTAIQL*RCALREHLWCDPVPRDPLP 246
P +++ T + RC + WCD PR PLP
Sbjct: 344 PDTMNSTTTLIGRC---DFDWCDDTPRVPLP 371
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +2
Query: 386 QRCAQYKKDGCHFAKWRCVLKIGRNT--PSYQAIQENANVLARYASICQSQ 532
Q C Q + C A +CV + PS Q+ N +YA +CQ Q
Sbjct: 226 QECTQPCQTTCQQAAPQCVQQCAPQCQQPSAPQCQQCQNTCQQYAPVCQQQ 276
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +2
Query: 386 QRCAQYKKDGCHFAKWRCVLKIGRNT--PSYQAIQENANVLARYASICQSQ 532
Q C Q + C A +CV + PS Q+ N +YA +CQ Q
Sbjct: 227 QECTQPCQTTCQQAAPQCVQQCAPQCQQPSAPQCQQCQNTCQQYAPVCQQQ 277
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,798,070
Number of Sequences: 27780
Number of extensions: 407715
Number of successful extensions: 1495
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1491
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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