Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Nnor0151
(389 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41992-1|AAA83354.2| 514|Caenorhabditis elegans Importin alpha ... 123 5e-29
AF040995-1|AAB97171.1| 514|Caenorhabditis elegans importin alph... 123 5e-29
AF005266-1|AAQ13407.1| 423|Caenorhabditis elegans importin alph... 123 5e-29
U80444-4|AAB37790.1| 531|Caenorhabditis elegans Importin alpha ... 98 2e-21
AF326936-1|AAG49386.1| 531|Caenorhabditis elegans importin beta... 98 2e-21
AF040996-1|AAB97172.1| 531|Caenorhabditis elegans importin alph... 98 2e-21
U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily ass... 33 0.094
Z73908-4|CAA98127.2| 447|Caenorhabditis elegans Hypothetical pr... 32 0.17
Z81485-6|CAB03979.1| 784|Caenorhabditis elegans Hypothetical pr... 30 0.67
U56964-1|AAB54033.2| 555|Caenorhabditis elegans Twik family of ... 28 2.0
AF083645-1|AAC32856.1| 555|Caenorhabditis elegans potassium cha... 28 2.0
U49449-1|AAB00117.1| 339|Caenorhabditis elegans olfactory recep... 28 2.7
U42830-6|AAC48279.2| 339|Caenorhabditis elegans Odorant respons... 28 2.7
AF016685-6|AAG24147.1| 338|Caenorhabditis elegans Seven tm rece... 28 2.7
Z75547-14|CAA99901.2| 461|Caenorhabditis elegans Hypothetical p... 27 3.6
AF022972-2|AAC48242.1| 346|Caenorhabditis elegans Seven tm rece... 27 3.6
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z83236-9|CAN86907.1| 140|Caenorhabditis elegans Hypothetical pr... 26 8.2
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 26 8.2
Z54342-12|CAA91145.2| 758|Caenorhabditis elegans Hypothetical p... 26 8.2
Z37983-7|CAA86058.1| 1106|Caenorhabditis elegans Hypothetical pr... 26 8.2
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 26 8.2
AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical... 26 8.2
>U41992-1|AAA83354.2| 514|Caenorhabditis elegans Importin alpha
family protein 3 protein.
Length = 514
Score = 123 bits (296), Expect = 5e-29
Identities = 63/130 (48%), Positives = 78/130 (60%), Gaps = 1/130 (0%)
Frame = +3
Query: 3 WALTNIASGTRQHTMAVVDGGAVPKLISLLGQGGV-VGEQCAWALGNIAGDGPETRDMIL 179
WALTNIASGT + T AVV+ GAVP + LL G + V EQ WALGNI GDGP RD L
Sbjct: 130 WALTNIASGTSEQTQAVVNAGAVPLFLQLLSCGNLNVCEQSVWALGNIIGDGPHFRDYCL 189
Query: 180 NAGIMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLEISDQ 359
GI+Q L+ +N + P LR W NLCR K+P +V LP +S L+ D
Sbjct: 190 ELGILQPLLQFINPEIPIGFLRNVTWVIVNLCRCKDPAPSPAVVRTILPALSLLIHHQDT 249
Query: 360 DVLADSCWAL 389
++L D+ WAL
Sbjct: 250 NILIDTVWAL 259
Score = 58.4 bits (135), Expect = 2e-09
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Frame = +3
Query: 3 WALTNIASGTRQHTMAVVDGGAVPKLISLLGQGGVVGEQCAW-ALGNIAGDGPETRDMIL 179
WAL+ + G +H V++ V L+ LLG V + A A+GNI E ++L
Sbjct: 257 WALSYLTDGGNEHIQMVIEAQVVTHLVPLLGHVDVKVQTAALRAVGNIVTGTDEQTQLVL 316
Query: 180 NAGIMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLEISDQ 359
++G+++ +P L A + AVW SN+ VQ A +P I LL+ D
Sbjct: 317 DSGVLR-FMPGLLAHYKEKINKEAVWFVSNITAGNQQQVQDVFDAGIMPMIIHLLDRGDF 375
Query: 360 DVLADSCWAL 389
++ WA+
Sbjct: 376 PTQKEAAWAI 385
Score = 39.1 bits (87), Expect = 0.001
Identities = 22/74 (29%), Positives = 35/74 (47%)
Frame = +3
Query: 168 DMILNAGIMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLE 347
D ++ +GI+ LV L++ P Q A W +N+ + Q + A A+P LL
Sbjct: 102 DDLIGSGILPVLVQCLSSTDPNLQFE-AAWALTNIASGTSEQTQAVVNAGAVPLFLQLLS 160
Query: 348 ISDQDVLADSCWAL 389
+ +V S WAL
Sbjct: 161 CGNLNVCEQSVWAL 174
Score = 33.1 bits (72), Expect = 0.071
Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Frame = +3
Query: 51 VVDGGAVPKLISLLGQGGV-VGEQCAWALGNIAGDGPETRDMILNAGIMQALVPLLNAQT 227
++ G +P L+ L + + AWAL NIA E ++NAG + + LL+
Sbjct: 104 LIGSGILPVLVQCLSSTDPNLQFEAAWALTNIASGTSEQTQAVVNAGAVPLFLQLLSCGN 163
Query: 228 PTSQLRIAVWTYSNLCRN----KNPLVQFDLVAPALPYISDLLEI 350
+ +VW N+ + ++ ++ ++ P L +I+ + I
Sbjct: 164 -LNVCEQSVWALGNIIGDGPHFRDYCLELGILQPLLQFINPEIPI 207
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/70 (21%), Positives = 31/70 (44%)
Frame = +3
Query: 180 NAGIMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLEISDQ 359
+A +++ V + P QL L ++NP + + + LP + L +D
Sbjct: 63 DANLLRLTVAAAQSSDPAEQLTAVQQARKMLSTDRNPPIDDLIGSGILPVLVQCLSSTDP 122
Query: 360 DVLADSCWAL 389
++ ++ WAL
Sbjct: 123 NLQFEAAWAL 132
>AF040995-1|AAB97171.1| 514|Caenorhabditis elegans importin alpha 3
protein.
Length = 514
Score = 123 bits (296), Expect = 5e-29
Identities = 63/130 (48%), Positives = 78/130 (60%), Gaps = 1/130 (0%)
Frame = +3
Query: 3 WALTNIASGTRQHTMAVVDGGAVPKLISLLGQGGV-VGEQCAWALGNIAGDGPETRDMIL 179
WALTNIASGT + T AVV+ GAVP + LL G + V EQ WALGNI GDGP RD L
Sbjct: 130 WALTNIASGTSEQTQAVVNAGAVPLFLQLLSCGNLNVCEQSVWALGNIIGDGPHFRDYCL 189
Query: 180 NAGIMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLEISDQ 359
GI+Q L+ +N + P LR W NLCR K+P +V LP +S L+ D
Sbjct: 190 ELGILQPLLQFINPEIPIGFLRNVTWVIVNLCRCKDPAPSPAVVRTILPALSLLIHHQDT 249
Query: 360 DVLADSCWAL 389
++L D+ WAL
Sbjct: 250 NILIDTVWAL 259
Score = 58.4 bits (135), Expect = 2e-09
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Frame = +3
Query: 3 WALTNIASGTRQHTMAVVDGGAVPKLISLLGQGGVVGEQCAW-ALGNIAGDGPETRDMIL 179
WAL+ + G +H V++ V L+ LLG V + A A+GNI E ++L
Sbjct: 257 WALSYLTDGGNEHIQMVIEAQVVTHLVPLLGHVDVKVQTAALRAVGNIVTGTDEQTQLVL 316
Query: 180 NAGIMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLEISDQ 359
++G+++ +P L A + AVW SN+ VQ A +P I LL+ D
Sbjct: 317 DSGVLR-FMPGLLAHYKEKINKEAVWFVSNITAGNQQQVQDVFDAGIMPMIIHLLDRGDF 375
Query: 360 DVLADSCWAL 389
++ WA+
Sbjct: 376 PTQKEAAWAI 385
Score = 39.1 bits (87), Expect = 0.001
Identities = 22/74 (29%), Positives = 35/74 (47%)
Frame = +3
Query: 168 DMILNAGIMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLE 347
D ++ +GI+ LV L++ P Q A W +N+ + Q + A A+P LL
Sbjct: 102 DDLIGSGILPVLVQCLSSTDPNLQFE-AAWALTNIASGTSEQTQAVVNAGAVPLFLQLLS 160
Query: 348 ISDQDVLADSCWAL 389
+ +V S WAL
Sbjct: 161 CGNLNVCEQSVWAL 174
Score = 33.1 bits (72), Expect = 0.071
Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Frame = +3
Query: 51 VVDGGAVPKLISLLGQGGV-VGEQCAWALGNIAGDGPETRDMILNAGIMQALVPLLNAQT 227
++ G +P L+ L + + AWAL NIA E ++NAG + + LL+
Sbjct: 104 LIGSGILPVLVQCLSSTDPNLQFEAAWALTNIASGTSEQTQAVVNAGAVPLFLQLLSCGN 163
Query: 228 PTSQLRIAVWTYSNLCRN----KNPLVQFDLVAPALPYISDLLEI 350
+ +VW N+ + ++ ++ ++ P L +I+ + I
Sbjct: 164 -LNVCEQSVWALGNIIGDGPHFRDYCLELGILQPLLQFINPEIPI 207
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/70 (21%), Positives = 31/70 (44%)
Frame = +3
Query: 180 NAGIMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLEISDQ 359
+A +++ V + P QL L ++NP + + + LP + L +D
Sbjct: 63 DANLLRLTVAAAQSSDPAEQLTAVQQARKMLSTDRNPPIDDLIGSGILPVLVQCLSSTDP 122
Query: 360 DVLADSCWAL 389
++ ++ WAL
Sbjct: 123 NLQFEAAWAL 132
>AF005266-1|AAQ13407.1| 423|Caenorhabditis elegans importin alpha-3
subunit protein.
Length = 423
Score = 123 bits (296), Expect = 5e-29
Identities = 63/130 (48%), Positives = 78/130 (60%), Gaps = 1/130 (0%)
Frame = +3
Query: 3 WALTNIASGTRQHTMAVVDGGAVPKLISLLGQGGV-VGEQCAWALGNIAGDGPETRDMIL 179
WALTNIASGT + T AVV+ GAVP + LL G + V EQ WALGNI GDGP RD L
Sbjct: 39 WALTNIASGTSEQTQAVVNAGAVPLFLQLLSCGNLNVCEQSVWALGNIIGDGPHFRDYCL 98
Query: 180 NAGIMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLEISDQ 359
GI+Q L+ +N + P LR W NLCR K+P +V LP +S L+ D
Sbjct: 99 ELGILQPLLQFINPEIPIGFLRNVTWVIVNLCRCKDPAPSPAVVRTILPALSLLIHHQDT 158
Query: 360 DVLADSCWAL 389
++L D+ WAL
Sbjct: 159 NILIDTVWAL 168
Score = 58.4 bits (135), Expect = 2e-09
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Frame = +3
Query: 3 WALTNIASGTRQHTMAVVDGGAVPKLISLLGQGGVVGEQCAW-ALGNIAGDGPETRDMIL 179
WAL+ + G +H V++ V L+ LLG V + A A+GNI E ++L
Sbjct: 166 WALSYLTDGGNEHIQMVIEAQVVTHLVPLLGHVDVKVQTAALRAVGNIVTGTDEQTQLVL 225
Query: 180 NAGIMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLEISDQ 359
++G+++ +P L A + AVW SN+ VQ A +P I LL+ D
Sbjct: 226 DSGVLR-FMPGLLAHYKEKINKEAVWFVSNITAGNQQQVQDVFDAGIMPMIIHLLDRGDF 284
Query: 360 DVLADSCWAL 389
++ WA+
Sbjct: 285 PTQKEAAWAI 294
Score = 39.1 bits (87), Expect = 0.001
Identities = 22/74 (29%), Positives = 35/74 (47%)
Frame = +3
Query: 168 DMILNAGIMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLE 347
D ++ +GI+ LV L++ P Q A W +N+ + Q + A A+P LL
Sbjct: 11 DDLIGSGILPVLVQCLSSTDPNLQFE-AAWALTNIASGTSEQTQAVVNAGAVPLFLQLLS 69
Query: 348 ISDQDVLADSCWAL 389
+ +V S WAL
Sbjct: 70 CGNLNVCEQSVWAL 83
Score = 33.1 bits (72), Expect = 0.071
Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Frame = +3
Query: 51 VVDGGAVPKLISLLGQGGV-VGEQCAWALGNIAGDGPETRDMILNAGIMQALVPLLNAQT 227
++ G +P L+ L + + AWAL NIA E ++NAG + + LL+
Sbjct: 13 LIGSGILPVLVQCLSSTDPNLQFEAAWALTNIASGTSEQTQAVVNAGAVPLFLQLLSCGN 72
Query: 228 PTSQLRIAVWTYSNLCRN----KNPLVQFDLVAPALPYISDLLEI 350
+ +VW N+ + ++ ++ ++ P L +I+ + I
Sbjct: 73 -LNVCEQSVWALGNIIGDGPHFRDYCLELGILQPLLQFINPEIPI 116
>U80444-4|AAB37790.1| 531|Caenorhabditis elegans Importin alpha
family protein 2 protein.
Length = 531
Score = 97.9 bits (233), Expect = 2e-21
Identities = 48/132 (36%), Positives = 76/132 (57%), Gaps = 3/132 (2%)
Frame = +3
Query: 3 WALTNIASGTRQHTMAVVDGGAVPKLISL-LGQGGVVGEQCAWALGNIAGDGPETRDMIL 179
WALTNI SG+ + T+A V+ G LI L + Q + EQ WA+ NIAGD + RD ++
Sbjct: 154 WALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQSAQISEQALWAVANIAGDSSQLRDYVI 213
Query: 180 NAGIMQALVPLLNA--QTPTSQLRIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLEIS 353
++AL+ L+ Q S +R W +SN+CR+KNP +++ + L++ +
Sbjct: 214 KCHGVEALMHLMEKVDQLGDSHVRTIAWAFSNMCRHKNPHAPLEVLRVLSKGLVKLVQHT 273
Query: 354 DQDVLADSCWAL 389
D+ V D+CWA+
Sbjct: 274 DRQVRQDACWAV 285
Score = 51.2 bits (117), Expect = 3e-07
Identities = 26/129 (20%), Positives = 56/129 (43%)
Frame = +3
Query: 3 WALTNIASGTRQHTMAVVDGGAVPKLISLLGQGGVVGEQCAWALGNIAGDGPETRDMILN 182
WA++ + G + + G +P +++ + + LGN+A +++
Sbjct: 283 WAVSYLTDGPDEQIELARESGVLPHVVAFFKEAENLVAPALRTLGNVATGNDSLTQAVID 342
Query: 183 AGIMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLEISDQD 362
G + ++PL+ +S ++ W SN+ +Q L A LP + ++L+ D
Sbjct: 343 LGSLDEILPLMEKTRSSSIVKECCWLVSNIIAGTQKQIQAVLDANLLPVLINVLKSGDHK 402
Query: 363 VLADSCWAL 389
++ WAL
Sbjct: 403 CQFEASWAL 411
Score = 32.3 bits (70), Expect = 0.12
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Frame = +3
Query: 51 VVDGGAVPKLISLLG-QGGVVGEQCAWALGNIAGDGPETRDMILNAGIMQALVPLLNAQT 227
V+ G + L+ L + V + AWAL NI E + AG+ L+ L Q+
Sbjct: 128 VIHCGLLQALVQALSVENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQS 187
Query: 228 PTSQLRIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLEISDQDVLADS 377
+ A+W +N+ + + L + + + + L+E DQ L DS
Sbjct: 188 AQISEQ-ALWAVANIAGDSSQLRDYVIKCHGVEALMHLMEKVDQ--LGDS 234
>AF326936-1|AAG49386.1| 531|Caenorhabditis elegans importin beta
binding domain proteinprotein.
Length = 531
Score = 97.9 bits (233), Expect = 2e-21
Identities = 48/132 (36%), Positives = 76/132 (57%), Gaps = 3/132 (2%)
Frame = +3
Query: 3 WALTNIASGTRQHTMAVVDGGAVPKLISL-LGQGGVVGEQCAWALGNIAGDGPETRDMIL 179
WALTNI SG+ + T+A V+ G LI L + Q + EQ WA+ NIAGD + RD ++
Sbjct: 154 WALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQSAQISEQALWAVANIAGDSSQLRDYVI 213
Query: 180 NAGIMQALVPLLNA--QTPTSQLRIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLEIS 353
++AL+ L+ Q S +R W +SN+CR+KNP +++ + L++ +
Sbjct: 214 KCHGVEALMHLMEKVDQLGDSHVRTIAWAFSNMCRHKNPHAPLEVLRVLSKGLVKLVQHT 273
Query: 354 DQDVLADSCWAL 389
D+ V D+CWA+
Sbjct: 274 DRQVRQDACWAV 285
Score = 51.2 bits (117), Expect = 3e-07
Identities = 26/129 (20%), Positives = 56/129 (43%)
Frame = +3
Query: 3 WALTNIASGTRQHTMAVVDGGAVPKLISLLGQGGVVGEQCAWALGNIAGDGPETRDMILN 182
WA++ + G + + G +P +++ + + LGN+A +++
Sbjct: 283 WAVSYLTDGPDEQIELARESGVLPHVVAFFKEAENLVAPALRTLGNVATGNDSLTQAVID 342
Query: 183 AGIMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLEISDQD 362
G + ++PL+ +S ++ W SN+ +Q L A LP + ++L+ D
Sbjct: 343 LGSLDEILPLMEKTRSSSIVKECCWLVSNIIAGTQKQIQAVLDANLLPVLINVLKSGDHK 402
Query: 363 VLADSCWAL 389
++ WAL
Sbjct: 403 CQFEASWAL 411
Score = 32.3 bits (70), Expect = 0.12
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Frame = +3
Query: 51 VVDGGAVPKLISLLG-QGGVVGEQCAWALGNIAGDGPETRDMILNAGIMQALVPLLNAQT 227
V+ G + L+ L + V + AWAL NI E + AG+ L+ L Q+
Sbjct: 128 VIHCGLLQALVQALSVENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQS 187
Query: 228 PTSQLRIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLEISDQDVLADS 377
+ A+W +N+ + + L + + + + L+E DQ L DS
Sbjct: 188 AQISEQ-ALWAVANIAGDSSQLRDYVIKCHGVEALMHLMEKVDQ--LGDS 234
>AF040996-1|AAB97172.1| 531|Caenorhabditis elegans importin alpha 2
protein.
Length = 531
Score = 97.9 bits (233), Expect = 2e-21
Identities = 48/132 (36%), Positives = 76/132 (57%), Gaps = 3/132 (2%)
Frame = +3
Query: 3 WALTNIASGTRQHTMAVVDGGAVPKLISL-LGQGGVVGEQCAWALGNIAGDGPETRDMIL 179
WALTNI SG+ + T+A V+ G LI L + Q + EQ WA+ NIAGD + RD ++
Sbjct: 154 WALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQSAQISEQALWAVANIAGDSSQLRDYVI 213
Query: 180 NAGIMQALVPLLNA--QTPTSQLRIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLEIS 353
++AL+ L+ Q S +R W +SN+CR+KNP +++ + L++ +
Sbjct: 214 KCHGVEALMHLMEKVDQLGDSHVRTIAWAFSNMCRHKNPHAPLEVLRVLSKGLVKLVQHT 273
Query: 354 DQDVLADSCWAL 389
D+ V D+CWA+
Sbjct: 274 DRQVRQDACWAV 285
Score = 51.2 bits (117), Expect = 3e-07
Identities = 26/129 (20%), Positives = 56/129 (43%)
Frame = +3
Query: 3 WALTNIASGTRQHTMAVVDGGAVPKLISLLGQGGVVGEQCAWALGNIAGDGPETRDMILN 182
WA++ + G + + G +P +++ + + LGN+A +++
Sbjct: 283 WAVSYLTDGPDEQIELARESGVLPHVVAFFKEAENLVAPALRTLGNVATGNDSLTQAVID 342
Query: 183 AGIMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLEISDQD 362
G + ++PL+ +S ++ W SN+ +Q L A LP + ++L+ D
Sbjct: 343 LGSLDEILPLMEKTRSSSIVKECCWLVSNIIAGTQKQIQAVLDANLLPVLINVLKSGDHK 402
Query: 363 VLADSCWAL 389
++ WAL
Sbjct: 403 CQFEASWAL 411
Score = 32.3 bits (70), Expect = 0.12
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Frame = +3
Query: 51 VVDGGAVPKLISLLG-QGGVVGEQCAWALGNIAGDGPETRDMILNAGIMQALVPLLNAQT 227
V+ G + L+ L + V + AWAL NI E + AG+ L+ L Q+
Sbjct: 128 VIHCGLLQALVQALSVENERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSVHQS 187
Query: 228 PTSQLRIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLEISDQDVLADS 377
+ A+W +N+ + + L + + + + L+E DQ L DS
Sbjct: 188 AQISEQ-ALWAVANIAGDSSQLRDYVIKCHGVEALMHLMEKVDQ--LGDS 234
>U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily assigned
gene nameprotein 162 protein.
Length = 2643
Score = 32.7 bits (71), Expect = 0.094
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 182 CRNNAGLGATSKCTNSNQSTENSCLDLQ 265
C NN AT +CTN +T++ C+D+Q
Sbjct: 1637 CLNNGKNKATCQCTNLQSTTDDGCVDIQ 1664
>Z73908-4|CAA98127.2| 447|Caenorhabditis elegans Hypothetical
protein F53B2.5 protein.
Length = 447
Score = 31.9 bits (69), Expect = 0.17
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 3 WALTNIASGTRQHTMAVVDGGAVPKLISLL-GQGGVVGEQCAWALGNIAGD 152
W +TN+ +++ T V+ + LI L+ Q + Q WA+ NIA D
Sbjct: 63 WIITNMCCISQEVTHLFVNSNCLDILIKLVRSQNARLSSQTVWAIANIAAD 113
Score = 28.7 bits (61), Expect = 1.5
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 14/102 (13%)
Frame = +3
Query: 3 WALTNIASGTRQHTMAVVDG--GAVPKLISLLGQGGV-VGEQCAWALGNIAGDGPETRD- 170
W ++N+ +G +H ++D +++ + G + ++C W +GN+ E +
Sbjct: 283 WIISNVVAGAPRHVDYIMDDPDAFYEWVMAGIHTGDKRLRKECLWIIGNLLATADEHQTY 342
Query: 171 MILNAGIMQALVPLLN----------AQTPTSQLRIAVWTYS 266
++++ GI+Q LL+ A T T LR W Y+
Sbjct: 343 LLVSLGIVQHFPALLDFDDVRLNEKAATTATELLREHPWQYT 384
>Z81485-6|CAB03979.1| 784|Caenorhabditis elegans Hypothetical
protein C49F5.6 protein.
Length = 784
Score = 29.9 bits (64), Expect = 0.67
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = -3
Query: 288 GFCFCKGYCKSKQLFSVDWLEFVHLEVAPRPALFLHLGSYL*SPDRLQLCSPVPMR 121
GFC+C G K ++ SV ++ + P+L L + + R+ L PM+
Sbjct: 29 GFCYCSGVVKFRKSESVGTVDIPFPSLGACPSLTLSMSPNMNFSSRMALAPTSPMK 84
>U56964-1|AAB54033.2| 555|Caenorhabditis elegans Twik family of
potassium channelsprotein 16 protein.
Length = 555
Score = 28.3 bits (60), Expect = 2.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 357 DLIFPINQKCKVEPGLQDRIVLE 289
DL+ + +KC VEPG+ D + LE
Sbjct: 306 DLLHAVGKKCGVEPGMIDALDLE 328
>AF083645-1|AAC32856.1| 555|Caenorhabditis elegans potassium
channel subunit n2P16 protein.
Length = 555
Score = 28.3 bits (60), Expect = 2.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 357 DLIFPINQKCKVEPGLQDRIVLE 289
DL+ + +KC VEPG+ D + LE
Sbjct: 306 DLLHAVGKKCGVEPGMIDALDLE 328
>U49449-1|AAB00117.1| 339|Caenorhabditis elegans olfactory receptor
Odr-10 protein.
Length = 339
Score = 27.9 bits (59), Expect = 2.7
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +3
Query: 174 ILNAGIMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLEIS 353
+ A ++Q L+P + PT + IA + NL N N +V + P L + +L I
Sbjct: 247 LFKALVLQTLIPTIFMYAPTGVMFIAPFFDVNLNANANFIVFCSFLYPGLDPLILILIIR 306
Query: 354 D 356
D
Sbjct: 307 D 307
>U42830-6|AAC48279.2| 339|Caenorhabditis elegans Odorant response
abnormal protein10 protein.
Length = 339
Score = 27.9 bits (59), Expect = 2.7
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +3
Query: 174 ILNAGIMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLEIS 353
+ A ++Q L+P + PT + IA + NL N N +V + P L + +L I
Sbjct: 247 LFKALVLQTLIPTIFMYAPTGVMFIAPFFDVNLNANANFIVFCSFLYPGLDPLILILIIR 306
Query: 354 D 356
D
Sbjct: 307 D 307
>AF016685-6|AAG24147.1| 338|Caenorhabditis elegans Seven tm
receptor protein 84 protein.
Length = 338
Score = 27.9 bits (59), Expect = 2.7
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 4/93 (4%)
Frame = +3
Query: 90 LGQGGVVGEQCAWALGNIAGDGPE-TRDM---ILNAGIMQALVPLLNAQTPTSQLRIAVW 257
LG G G QC + L + + E TR M +L A +QA +P++ TPT+ L ++
Sbjct: 216 LGIMGYFGMQCYFKLAKLQSELSEHTRRMQKQLLFALAIQAGIPIIMMYTPTALLLVSPI 275
Query: 258 TYSNLCRNKNPLVQFDLVAPALPYISDLLEISD 356
+ N + V P L ++ + I D
Sbjct: 276 VGVSFGAYSNIAIALVAVYPPLDQLAIIWIIRD 308
>Z75547-14|CAA99901.2| 461|Caenorhabditis elegans Hypothetical
protein R11D1.7 protein.
Length = 461
Score = 27.5 bits (58), Expect = 3.6
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 186 GIMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKNPLVQFD 305
GI VP +N Q PTS + ++ L KNPL F+
Sbjct: 253 GIKTGPVPRINVQEPTSSSNLPSRSHIALNLMKNPLNSFN 292
>AF022972-2|AAC48242.1| 346|Caenorhabditis elegans Seven tm
receptor protein 112 protein.
Length = 346
Score = 27.5 bits (58), Expect = 3.6
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = +3
Query: 126 WALGNIAGDGPETRDM---ILNAGIMQALVPLLNAQTPTSQLRIAVWTYSNLCRNKNPLV 296
W + G TR + + A + Q LVP + PT + IA + NL N N +V
Sbjct: 228 WTIREHRGASDRTRHLHRQLFKALVFQTLVPSIFMYIPTGVMFIAPFFDINLNANANFIV 287
Query: 297 QFDLVAPAL 323
+ P L
Sbjct: 288 FCSFLYPGL 296
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 26.6 bits (56), Expect = 6.2
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 182 CRNNAGLGATSKCTNSNQSTENSCLDLQ*PLQKQKPSSTIRSCSPGSTL 328
C+N LG+ + C+ ++ NS L + P ++ S +CS STL
Sbjct: 197 CQNTC-LGSCNSCSGGGCNSNNSNLVVVTPCERSCNSGCRSTCSSTSTL 244
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 26.6 bits (56), Expect = 6.2
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -2
Query: 160 SGPSPAMFPSAHAHCSPTTPP*PKRLISLGTAPPSTTA 47
+ P P PS + H +P PP P LG AP ST A
Sbjct: 486 NAPPPPPMPSINGH-APNPPPPPP---LLGIAPMSTNA 519
>Z83236-9|CAN86907.1| 140|Caenorhabditis elegans Hypothetical
protein K10H10.12 protein.
Length = 140
Score = 26.2 bits (55), Expect = 8.2
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 53 C*WWSCTQTNKPFRSRRCGRRTVRMGTG 136
C ++CT +PF +R CG +R G
Sbjct: 55 CFKFTCTGIEEPFTARGCGLSVLRSAAG 82
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 26.2 bits (55), Expect = 8.2
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = -2
Query: 157 GPSPAMFPSAHAHCSPTTPP*PKRLISLGTAPPSTTAMVCCR---VPE 23
GPSP P C P PP P PP+ + +VCC+ VPE
Sbjct: 101 GPSPVPAPC----CPP--PPAPAAPCCPPPPPPTPSPLVCCKQAPVPE 142
>Z54342-12|CAA91145.2| 758|Caenorhabditis elegans Hypothetical
protein C08H9.3a protein.
Length = 758
Score = 26.2 bits (55), Expect = 8.2
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 240 LRIAVWTYSNLCRNKNPLVQFDLVAPALPYISDLLEISDQDVLAD 374
+ ++ WTY +L K+ D LPYI L + + +V+AD
Sbjct: 554 ISVSFWTYPDL---KHVATISDTRMLELPYIPQYLAVREAEVMAD 595
>Z37983-7|CAA86058.1| 1106|Caenorhabditis elegans Hypothetical
protein B0393.5 protein.
Length = 1106
Score = 26.2 bits (55), Expect = 8.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2
Query: 179 KCRNNAGLGATSKCTNSNQSTENSCL 256
+C+N G S+CTN+ E CL
Sbjct: 491 ECKNPDACGPNSQCTNTQGGYECECL 516
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 26.2 bits (55), Expect = 8.2
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = -2
Query: 211 SGTKACIIPAFRIISLVSGPSPAMFPSAHAHCSPTTPP*PKRLISLGTAPPSTTAMVCCR 32
+GT + P+ + S S P+PA P A A P+TP ++ + +AP + +A C
Sbjct: 2598 NGTGSGAAPSSKAAS--SRPTPAATPLAVATPKPSTPK-VEKSSATPSAPETPSASATCN 2654
Query: 31 V 29
+
Sbjct: 2655 I 2655
>AC025716-19|AAK39602.2| 549|Caenorhabditis elegans Hypothetical
protein Y39G10AR.17 protein.
Length = 549
Score = 26.2 bits (55), Expect = 8.2
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 139 FPSAHAHCSPTTPP*P 92
FPS AH P TPP P
Sbjct: 171 FPSEQAHVGPRTPPSP 186
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,838,742
Number of Sequences: 27780
Number of extensions: 215494
Number of successful extensions: 633
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 587646290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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