Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0146
         (741 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    24   1.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    24   1.5  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   4.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.9  

>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +3

Query: 612 IGISGVTCGGKTTLANKLKNALTPVYVFHQDKYFYPD 722
           +G   +T GG T    K  NA+  +Y  H++   YPD
Sbjct: 69  LGQDLITTGGYTL--PKESNAIIHIYDVHRNADIYPD 103


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 312 YC*KNYTKG*KAKTFT*EHRSEKRFCC 392
           +C K +T+  + +     H  EKRF C
Sbjct: 351 FCGKRFTRSDELQRHLRTHTGEKRFAC 377


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 624 GVTCGGKTTLANKLKNALTPV 686
           G TCGG ++    LK+A  PV
Sbjct: 21  GSTCGGSSSSMAYLKSAPYPV 41


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 265  SGQLYYH*LCCSFFHFYFCMDEELL 191
            SGQ Y H  C S   FY C++  L+
Sbjct: 1209 SGQYYPHESCSS---FYVCVNGHLV 1230


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,740
Number of Sequences: 336
Number of extensions: 4105
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)