Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0146
         (741 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68159-7|CAA92286.1|  604|Caenorhabditis elegans Hypothetical pr...    33   0.28 
AL021346-2|CAB63233.1|  419|Caenorhabditis elegans Hypothetical ...    32   0.49 
Z81525-7|CAE17780.1|  263|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AC006708-18|AAF60424.2|  450|Caenorhabditis elegans Hypothetical...    28   8.0  
AC006708-17|AAK68884.2|  435|Caenorhabditis elegans Hypothetical...    28   8.0  

>Z68159-7|CAA92286.1|  604|Caenorhabditis elegans Hypothetical
           protein C33D9.8 protein.
          Length = 604

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +1

Query: 286 LSEPAADPNIVEKIIQRAKKQKPLLENTEVKKDSAVYEL 402
           LSE +A  N  + +I++  ++  LL+   VKKD  +YEL
Sbjct: 252 LSEASAQLNEKDLVIEKITRKIELLQENNVKKDQRIYEL 290


>AL021346-2|CAB63233.1|  419|Caenorhabditis elegans Hypothetical
           protein H37A05.2 protein.
          Length = 419

 Score = 31.9 bits (69), Expect = 0.49
 Identities = 20/83 (24%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
 Frame = +3

Query: 501 FIDLSHKKSIQYRTTNFVPPSANLSQNSNMPGKD-WIII-GISGVTCGGKTTLAN-KLKN 671
           F +LS  K+  Y  + ++P   ++  N  +  ++ W ++ GI+  +  G++   + K K+
Sbjct: 142 FTELSPLKA--YIISEYIPNLHHVGMNDCISIEEIWAVVDGIAAFSAMGESMSEDEKKKS 199

Query: 672 ALTPVYVFHQDKYFYPDDSPNTL 740
            +  +Y+    KYF+ D SP+ +
Sbjct: 200 TIGEIYIEEAVKYFFDDQSPDNM 222


>Z81525-7|CAE17780.1|  263|Caenorhabditis elegans Hypothetical
           protein F33A8.10 protein.
          Length = 263

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +1

Query: 295 PAADPNIVEKIIQRAKKQKPLLENTEVKKDSAVYELIPNPKW 420
           PAA PN  ++ +Q  +   P LE+  V      YE++ +P W
Sbjct: 121 PAA-PNTPQQSLQPTRIIPPFLESASVGDQDKFYEIVQHPTW 161


>AC006708-18|AAF60424.2|  450|Caenorhabditis elegans Hypothetical
           protein Y110A7A.6a protein.
          Length = 450

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +3

Query: 531 QYRTTNFVPPSANLSQNSNMPGKDWIIIGISGVTCGGKTTLANKL 665
           Q + T FVP S N ++   +P     +I + G+   GKT +++KL
Sbjct: 9   QRKMTYFVPKSDNSNEQVRVPN----VIALVGLPARGKTYISHKL 49


>AC006708-17|AAK68884.2|  435|Caenorhabditis elegans Hypothetical
           protein Y110A7A.6b protein.
          Length = 435

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +3

Query: 531 QYRTTNFVPPSANLSQNSNMPGKDWIIIGISGVTCGGKTTLANKL 665
           Q + T FVP S N ++   +P     +I + G+   GKT +++KL
Sbjct: 15  QRKMTYFVPKSDNSNEQVRVPN----VIALVGLPARGKTYISHKL 55


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,056,950
Number of Sequences: 27780
Number of extensions: 364879
Number of successful extensions: 1074
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)