Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0146
         (741 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    27   0.18 
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    25   0.75 
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   7.0  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   7.0  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   7.0  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   7.0  
AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    22   7.0  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   7.0  
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           21   9.2  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           21   9.2  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +3

Query: 603 WIIIGISGVTCGGKTTL-ANKLKNALTPVYVFHQDKYFYPDD 725
           W+++   G+TC G T + +  L N+L  +Y +    Y +  D
Sbjct: 4   WLLLMYLGITCQGVTDIHSRNLTNSLKVIYEWKYIDYDFGSD 45


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 25.0 bits (52), Expect = 0.75
 Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
 Frame = +3

Query: 603 WI-IIGISGVTCGGKTTLANKLKNALTPVYVFHQDKYF 713
           W+ ++   G+ C G     N  +N    + V H+ KYF
Sbjct: 4   WLFMVACLGIACQGAIVRENSPRNLEKSLNVIHEWKYF 41


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 155 FSLLCSSGSTNSNACLIKAEDIF*D 81
           F++LC      +   L++AEDIF D
Sbjct: 33  FTILCILTLALTLVTLVRAEDIFED 57


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 155 FSLLCSSGSTNSNACLIKAEDIF*D 81
           F++LC      +   L++AEDIF D
Sbjct: 33  FTILCILTLALTLVTLVRAEDIFED 57


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 155 FSLLCSSGSTNSNACLIKAEDIF*D 81
           F++LC      +   L++AEDIF D
Sbjct: 33  FTILCILTLALTLVTLVRAEDIFED 57


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 155 FSLLCSSGSTNSNACLIKAEDIF*D 81
           F++LC      +   L++AEDIF D
Sbjct: 33  FTILCILTLALTLVTLVRAEDIFED 57


>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +1

Query: 361 ENTEVKKDSAVYELIPNPKWFLLFCAVWGL 450
           E T++++ + VY+   N    ++FC  +GL
Sbjct: 223 EITQIQEATLVYKDGTNVMGMIVFCITFGL 252


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -2

Query: 464 PPMKNSPQTAQNSRNHFGFGINS*TAESFF 375
           P + + P   +N  NH  FG++    E F+
Sbjct: 347 PVVVDLPGVGENLHNHQSFGMDFSLNEDFY 376


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +1

Query: 277 LLVLSEPAADPNIVEKIIQRAKKQKPLLENT--EVKKD 384
           L  L   ++D N +++     ++QK L++NT   V+KD
Sbjct: 5   LRFLGISSSDDNRIDQATGLTERQKKLVQNTWAVVRKD 42


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +1

Query: 277 LLVLSEPAADPNIVEKIIQRAKKQKPLLENT--EVKKD 384
           L  L   ++D N +++     ++QK L++NT   V+KD
Sbjct: 5   LRFLGISSSDDNRIDQATGLTERQKKLVQNTWAVVRKD 42


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,890
Number of Sequences: 438
Number of extensions: 4475
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)