Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0144
         (617 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    24   1.2  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    24   1.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   3.6  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   6.3  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = +1

Query: 115 LQTISFKLNIFVLNKKMQSSSPGPVIDLRADVNRLVLHSNLINLEVIID 261
           LQT++ K+N   +++K+   S G V  L   +  L + +NL    +I++
Sbjct: 392 LQTMNIKVNYHRVHRKIMVQSLGRVGVLVVIIGTLAIIANLNGDTMIVE 440


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = +1

Query: 115 LQTISFKLNIFVLNKKMQSSSPGPVIDLRADVNRLVLHSNLINLEVIID 261
           LQT++ K+N   +++K+   S G V  L   +  L + +NL    +I++
Sbjct: 117 LQTMNIKVNYHRVHRKIMVQSLGRVGVLVVIIGTLAIIANLNGDTMIVE 165


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 524  VFKLFKSKPIFLIKLFILQIN 462
            VF  F    +F++ +F+LQ+N
Sbjct: 1269 VFAFFMFNALFVLVVFLLQLN 1289


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 524  VFKLFKSKPIFLIKLFILQIN 462
            VF  F    +F++ +F+LQ+N
Sbjct: 1269 VFAFFMFNALFVLVVFLLQLN 1289


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 481 YSFCKLTILRPIHVSRSAYILPLKA 407
           Y FC+  I+ P H   +  + PLK+
Sbjct: 299 YYFCRAFIIFPTHFYCAFSLYPLKS 323


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 103 IKPKPIHDTLKICN 62
           I+P  +HDT  +CN
Sbjct: 101 IRPPILHDTQPMCN 114


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,807
Number of Sequences: 336
Number of extensions: 3319
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)