Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0144
         (617 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70310-3|CAA94365.1|  506|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z49888-2|CAA90061.1| 1071|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z75545-5|CAA99883.3|  836|Caenorhabditis elegans Hypothetical pr...    28   6.1  
U80030-13|AAG24169.1|  831|Caenorhabditis elegans Hypothetical p...    27   8.1  

>Z70310-3|CAA94365.1|  506|Caenorhabditis elegans Hypothetical
           protein R11A8.3 protein.
          Length = 506

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
 Frame = -2

Query: 601 PRIFCKVTFLQDLYVCSLCNCLFGSMFLSCLNQ---NPSF*SNYSFCKLTILRPIHVSRS 431
           PRIF K+  +   +V +  N  F  +FLS L Q   +      Y  C   I + I +  +
Sbjct: 104 PRIFYKLLKVSGTFVTACQNMAFDHLFLSSLQQQKFDVGLVEQYDSCGFGIFKSIGIENT 163

Query: 430 AYI 422
            ++
Sbjct: 164 VWL 166


>Z49888-2|CAA90061.1| 1071|Caenorhabditis elegans Hypothetical
           protein F47A4.5 protein.
          Length = 1071

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 11/47 (23%), Positives = 27/47 (57%)
 Frame = +1

Query: 235 LINLEVIIDIEHELRKESGDLISLMFLLYDDPDIALVKLTAYQQSSN 375
           L+N +V + ++ +++  +G+   L+F+    PD+  + +T Y   +N
Sbjct: 561 LLNRKVELGLDIDVKNNAGETALLLFITTRKPDLLPLLVTLYAHGAN 607


>Z75545-5|CAA99883.3|  836|Caenorhabditis elegans Hypothetical
           protein K10D3.1 protein.
          Length = 836

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 362 SNLVMHIMSIPCFKIGF*RQNVS 430
           S ++ H+  IP FK+GF R NV+
Sbjct: 814 SQVIRHVNVIPSFKLGFFRWNVN 836


>U80030-13|AAG24169.1|  831|Caenorhabditis elegans Hypothetical
           protein K12D9.12 protein.
          Length = 831

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
 Frame = +1

Query: 226 HSNLINLEVIIDIEHELRKESGDLISLMFLLYDDPD---IALVKLTAYQQSSNAYH 384
           HSN+ NL  + ++E      +G    + F L+D+P+   +   KL  ++ + + YH
Sbjct: 215 HSNIQNLSCLENLEILKISNNGSGEQIDFNLHDNPEMIRLGFPKLEEFKNAHDTYH 270


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,190,168
Number of Sequences: 27780
Number of extensions: 294082
Number of successful extensions: 825
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)